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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2203839..2204957- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007347-T1 ID=KJC3_007347-T1|Name=KJC3_007347-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1119bp|location=Sequence derived from alignment at ch5:2203839..2204957- (Aspergillus niger KJC3)
GCTTCATTCTCCAATTCGAGCATGACGCAATATCAATAACCTCCCTCTGT
TTTCTTTTTTGAGATCCACTATATATATACATCATGGCTGGTCATGCGCA
GCCCGGAAAAGCCCCAGGCAGTCGGTTAAAGCCCGTGGCAGACTCGCTCG
ACACCGTGGGGTTTGTATCCAAAGGCGATCAAAAGTATGCTCACGGCCTC
CTGATACCCGTGGTGGAGCGACGATGCGGTTACCTGCGGCAGTGCTGACG
CTCACAGATTGCTAGACCACAAGGTTCAGAAAGAGTACTATGACAAGATT
GTAAATCGGTACATGGAGTTCTGCGCTCGCCATTCCAAAAACCTAGAAGC
GGCATGGACGTCCCTTCCCAGGAGCGCTTCGAGCGATGCCACCAGCAATC
CGCCAGCTTCTCTTCCCTCCTCAAACAATAAGTCGACAGGGCCCCGTAGT
CCTTCCCCATCCGCAGAACTATCCACCATCCTCCTCTCCCTCCGCAAGCT
GCGCGAGGCGGTTTTGGCTACCAGCTCCAAGATTCCCATATCTTTCTCCC
AGCAAGTCCACATCTTTTCCATCAAGCTCGCGATTCAAGCCCGACATCCT
CCATCATACTTTCCTTCCTTTCGTTACATCCTCGAGGATTTACACACTTC
TTCTCACCCCTTGCCGGACTCTGACTTGAAAGATCTCATTTCGTATTGGA
TCCTGGATTACGCCTGTCGACAGGAGGACATGGTTGCGGCTTATCAGCTA
CGTGCGCGTGCCCGCAGACGATACGGTTTTCAGTCATCGACTATAGACCG
TGTATTGAACGCCCTGGCACATGATAACTGGATTGTGTTCTGGCAGATTC
GGCAAGATGTAGATTCCCGGATGCGCGCCGTCATGAATTGGGCTGAAGAC
CGCATCAGACGACATGCTCTCAAAGCAGTCGGCAAAGCTTATCTCAGCAC
TGACACCCGATGGATCACCGAAGGTTGCACCGGTGACAGCAATTGGACAT
GGGAGAACCTGGTAAAGGCGGAGAGCCTGGGTTGGGAGAAAGAGGGCGAT
AGAATCATTATTCGGAAGCCGAAGCAAAGACCGCAAAATAATCTTGCACC
CATAAAGGAGAATCCATGA back to topCoding sequence (CDS) from alignment at ch5:2203839..2204957- >KJC3_007347-T1 ID=KJC3_007347-T1|Name=KJC3_007347-T1|organism=Aspergillus niger KJC3|type=CDS|length=1926bp|location=Sequence derived from alignment at ch5:2203839..2204957- (Aspergillus niger KJC3)
ATTGCTAGACCACAAGGTTCAGAAAGAGTACTATGACAAGATTGTAAATC
GGTACATGGAGTTCTGCGCTCGCCATTCCAAAAACCTAGAAGCGGCATGG
ACGTCCCTTCCCAGGAGCGCTTCGAGCGATGCCACCAGCAATCCGCCAGC
TTCTCTTCCCTCCTCAAACAATAAGTCGACAGGGCCCCGTAGTCCTTCCC
CATCCGCAGAACTATCCACCATCCTCCTCTCCCTCCGCAAGCTGCGCGAG
GCGGTTTTGGCTACCAGCTCCAAGATTCCCATATCTTTCTCCCAGCAAGT
CCACATCTTTTCCATCAAGCTCGCGATTCAAGCCCGACATCCTCCATCAT
ACTTTCCTTCCTTTCGTTACATCCTCGAGGATTTACACACTTCTTCTCAC
CCCTTGCCGGACTCTGACTTGAAAGATCTCATTTCGTATTGGATCCTGGA
TTACGCCTGTCGACAGGAGGACATGGTTGCGGCTTATCAGCTACGTGCGC
GTGCCCGCAGACGATACGGTTTTCAGTCATCGACTATAGACCGTGTATTG
AACGCCCTGGCACATGATAACTGGATTGTGTTCTGGCAGATTCGGCAAGA
TGTAGATTCCCGGATGCGCGCCGTCATGAATTGGGCTGAAGACCGCATCA
GACGACATGCTCTCAAAGCAGTCGGCAAAGCTTATCTCAGCACTGACACC
CGATGGATCACCGAAGGTTGCACCGGTGACAGCAATTGGACATGGGAGAA
CCTGGTAAAGGCGGAGAGCCTGGGTTGGGAGAAAGAGGGCGATAGAATCA
TTATTCGGAAGCCGAAGCAAAGACCGCAAAATAATCTTGCACCCATAAAG
GAGAATCCATGAATGGCTGGTCATGCGCAGCCCGGAAAAGCCCCAGGCAG
TCGGTTAAAGCCCGTGGCAGACTCGCTCGACACCGTGGGGTTTGTATCCA
AAGGCGATCAAAAATTGCTAGACCACAAGGTTCAGAAAGAGTACTATGAC
AAGATTGTAAATCGGTACATGGAGTTCTGCGCTCGCCATTCCAAAAACCT
AGAAGCGGCATGGACGTCCCTTCCCAGGAGCGCTTCGAGCGATGCCACCA
GCAATCCGCCAGCTTCTCTTCCCTCCTCAAACAATAAGTCGACAGGGCCC
CGTAGTCCTTCCCCATCCGCAGAACTATCCACCATCCTCCTCTCCCTCCG
CAAGCTGCGCGAGGCGGTTTTGGCTACCAGCTCCAAGATTCCCATATCTT
TCTCCCAGCAAGTCCACATCTTTTCCATCAAGCTCGCGATTCAAGCCCGA
CATCCTCCATCATACTTTCCTTCCTTTCGTTACATCCTCGAGGATTTACA
CACTTCTTCTCACCCCTTGCCGGACTCTGACTTGAAAGATCTCATTTCGT
ATTGGATCCTGGATTACGCCTGTCGACAGGAGGACATGGTTGCGGCTTAT
CAGCTACGTGCGCGTGCCCGCAGACGATACGGTTTTCAGTCATCGACTAT
AGACCGTGTATTGAACGCCCTGGCACATGATAACTGGATTGTGTTCTGGC
AGATTCGGCAAGATGTAGATTCCCGGATGCGCGCCGTCATGAATTGGGCT
GAAGACCGCATCAGACGACATGCTCTCAAAGCAGTCGGCAAAGCTTATCT
CAGCACTGACACCCGATGGATCACCGAAGGTTGCACCGGTGACAGCAATT
GGACATGGGAGAACCTGGTAAAGGCGGAGAGCCTGGGTTGGGAGAAAGAG
GGCGATAGAATCATTATTCGGAAGCCGAAGCAAAGACCGCAAAATAATCT
TGCACCCATAAAGGAGAATCCATGAATGGCTGGTCATGCGCAGCCCGGAA
AAGCCCCAGGCAGTCGGTTAAAGCCCGTGGCAGACTCGCTCGACACCGTG
GGGTTTGTATCCAAAGGCGATCAAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007347-T1.utr5p1 | KJC3_007347-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2203839..2204957 - |
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