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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2249428..2252015+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007367-T1 ID=KJC3_007367-T1|Name=KJC3_007367-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2588bp|location=Sequence derived from alignment at ch5:2249428..2252015+ (Aspergillus niger KJC3)
CGCTGATCCAAGCGTCGAGCTCTCAATCAAAAGACACAATTCGTCTACAG
CATGCCTGATAGCTAGCGCTCCGATTGCCCGCCAGCAGCCGACAAATCCA
CTCGCCAACCGCAGCGTATGCGCCATGCGACGAACATTCTATTTAACCCA
CTAAGATATCGTCGCACTTAGTACTCCGCACCCTACCCAGTTCACAATGC
CTCGGCCCCGCAGGTCCAATCGCGCCTCTAGCGCCAGGACAAAATATATC
CATGACCCCTTCGAAGCGGCCGGTTTTAGCGACGAAGGAGAGGGCCCCGC
TACCTCCGAAACCCCGCAGCGCAGAAAGGGCAAGGGAAAGGCTAAACAAG
CTGTCGCGGACGAGGGTTCTTCGGACGAAGACTTTGCAATGGATGATGCC
AACGGAGATGACGACGACGATGATGATGAGTACAATGATAATGACGTGGA
AATGGTCCTTGAGAATGAAGATGAAGATGCAGAGGAAGACGACGATGCGT
CGGCCTCAGAAGTTGACGCGGGCAGTCGTCGTCAGCGGAAAAAGCCCGCT
GCTGCCGCTATGCCAAAGCCTAGCAGCAGCGTTAAGCGGCGTCGTCCGGA
TGGGAGTCTTGCTGTGCCCGGGGAAGAGACGCATTCGCGCGGATCGTGGA
ACCCCCTTGAGCATGTTGGAAAGGCAGTTCATCTACGCGTTACATTTGGC
ACAGATGAGAGGGATATACTTTCCATTATAAGTGCGCGGGATCGCTGGTA
CAAGGGGGTCGATTCTACGTTTCCGACGCGCGAGTCATTGAACGAGTCGC
ATGATATGCCGGATTATGGATATGGGAACTCGTTTGGCTTGGAGGCCGAG
GACATGAAACGGGAAAGCTCCCGTGCATGGGATTGGTACTATAGTAAGGA
TGTGGGTGCACACTTTAGGAAAAGGCAGCGCGTCCAGAAGATTAAGGAGA
ATGAAGCTCGCTCGGTCTACTTTCCTAGTTCCAGAGGACCACATACCGTG
CTCGCTGGCCCGGTTGATGAGCAGAAGGTCTTTTCCCTCGCTCAGCATGA
TGTGCTTGATTTTGGCGAGGCATGGGAGGGCGATGCTTCTACATCTCAGA
AACAGGGGAAGCAGGCTGGGAAGCAAGCCAAGACGAAACAGCCTGAAAGA
AAGAGAAGGAAACGAGAGGGTTGGCTTCTTAATCTAGGGAACAAAGTCCA
ATGTTTGGCCTGGGTGCCAAATCAAACTGGCCTCACGCAGTATCTGTCCG
TCGTGGCTCCAATCCTACCGGACCAAAAGGAGCAGTATCCAGATCCGTAC
AAGGACCAGGCGGCTCCAGCATTCAGACCTTCAGCGCCGTATCCGTCTGC
GCTGCAGCTTTGGGAGCTCAAGGCCGAAGAAGCCGCGTCACTGACCAAGA
CAATCGATATGACATCCAAGCCGCGATTACGCCTCGCGCTGTGCACTGAT
TGGGGCGATCTGAGGCGAATGGCCTGGTGCCCGATGCCTCGAGACCCGCG
GAACGAAGACGACAAAGACGCGCAGAAGAGCGTCGGCCTTCTGGCAGGTG
TATGGGGAGATGGCCGGGTGAGAGTCATCGATGTCAAACTGAGTCGTGAC
CCAAACCAGACTGAATACTGTACGTCCAAATACCAGAATAAAGCTAAGTC
CCATGCTAACAGCTCAGATAAATTGCAATCCCCCGTCTTCGAAGCAAAAC
CACATTCGACCGTATGTACATCTGTAACATGGCTCTCCCCGAGCGACATC
GCCGTAGGCTGTGCCAACGGATTCGTCGCCATCTGGAGCATCGTCTCATC
GCCATCCTCACCCTCCAATCCCATCCCCTACTTCTACCAGCAACTGCACT
CGACATGGATCCTCAACCTCGCCTCTGCCTACCCGACCCATCCCTATCTC
ATCAGCACCACCTCCATGGACGGCGAAAGCCGACTCACCTCCATTATCGA
CCCTCAAAAAGACAGCGTCAATGCAAACCGCATGCGCGTAGGCACCGCGC
ACCTCACCTACTCCCCACTTCTGCACTCCTTCGTCTCGGGCGACGAGAAC
GACTTTCTGCGCCTCCTCGCCATCCGTCGCTTCTTCACTTCCACCGCCGT
GGCTCGGCTCCCGAGTATGATCTCCGCCCTCGGACCCTGCAGCTTCTGGC
ACCCAAGCCTCCTCGTCGGCTGCACCGGCGGCACCGTGCAAGCCACGAAT
CCCCTCCGCCGGATGATGCACGCCAAGGAGAAACAATGGCAACAGACTTG
GTTCCAGCATGAATGGGTGCGAGGCTCAGGCACGGGCACAGGCACTAGCC
GGTTTCACGACGGTTACCGCGCCGAACACACCAGCTTGCTGCGTAATCTG
GTCGGTGACCCGAGACTGATCAATGGCACGGCGGTGATTACGGTATTCGA
TGAAGAAACACACGTCACTGCGCTCTCGTGGAACCCGAATCGGGTGTGCG
CTGGGTGGGCTGCGGCTGGGATGGGATGTGGCTTGGTTCGGGTTGAGGAT
TTAGCGTTGTCGTGAGATTTAGGAATTGAATTGCCTAATAGATAGCAGGA
CGAAGAATACGTTAACCAAACCGAATGATTGAATGAAT back to topCoding sequence (CDS) from alignment at ch5:2249428..2252015+ >KJC3_007367-T1 ID=KJC3_007367-T1|Name=KJC3_007367-T1|organism=Aspergillus niger KJC3|type=CDS|length=4542bp|location=Sequence derived from alignment at ch5:2249428..2252015+ (Aspergillus niger KJC3)
ATGCCTCGGCCCCGCAGGTCCAATCGCGCCTCTAGCGCCAGGACAAAATA
TATCCATGACCCCTTCGAAGCGGCCGGTTTTAGCGACGAAGGAGAGGGCC
CCGCTACCTCCGAAACCCCGCAGCGCAGAAAGGGCAAGGGAAAGGCTAAA
CAAGCTGTCGCGGACGAGGGTTCTTCGGACGAAGACTTTGCAATGGATGA
TGCCAACGGAGATGACGACGACGATGATGATGAGTACAATGATAATGACG
TGGAAATGGTCCTTGAGAATGAAGATGAAGATGCAGAGGAAGACGACGAT
GCGTCGGCCTCAGAAGTTGACGCGGGCAGTCGTCGTCAGCGGAAAAAGCC
CGCTGCTGCCGCTATGCCAAAGCCTAGCAGCAGCGTTAAGCGGCGTCGTC
CGGATGGGAGTCTTGCTGTGCCCGGGGAAGAGACGCATTCGCGCGGATCG
TGGAACCCCCTTGAGCATGTTGGAAAGGCAGTTCATCTACGCGTTACATT
TGGCACAGATGAGAGGGATATACTTTCCATTATAAGTGCGCGGGATCGCT
GGTACAAGGGGGTCGATTCTACGTTTCCGACGCGCGAGTCATTGAACGAG
TCGCATGATATGCCGGATTATGGATATGGGAACTCGTTTGGCTTGGAGGC
CGAGGACATGAAACGGGAAAGCTCCCGTGCATGGGATTGGTACTATAGTA
AGGATGTGGGTGCACACTTTAGGAAAAGGCAGCGCGTCCAGAAGATTAAG
GAGAATGAAGCTCGCTCGGTCTACTTTCCTAGTTCCAGAGGACCACATAC
CGTGCTCGCTGGCCCGGTTGATGAGCAGAAGGTCTTTTCCCTCGCTCAGC
ATGATGTGCTTGATTTTGGCGAGGCATGGGAGGGCGATGCTTCTACATCT
CAGAAACAGGGGAAGCAGGCTGGGAAGCAAGCCAAGACGAAACAGCCTGA
AAGAAAGAGAAGGAAACGAGAGGGTTGGCTTCTTAATCTAGGGAACAAAG
TCCAATGTTTGGCCTGGGTGCCAAATCAAACTGGCCTCACGCAGTATCTG
TCCGTCGTGGCTCCAATCCTACCGGACCAAAAGGAGCAGTATCCAGATCC
GTACAAGGACCAGGCGGCTCCAGCATTCAGACCTTCAGCGCCGTATCCGT
CTGCGCTGCAGCTTTGGGAGCTCAAGGCCGAAGAAGCCGCGTCACTGACC
AAGACAATCGATATGACATCCAAGCCGCGATTACGCCTCGCGCTGTGCAC
TGATTGGGGCGATCTGAGGCGAATGGCCTGGTGCCCGATGCCTCGAGACC
CGCGGAACGAAGACGACAAAGACGCGCAGAAGAGCGTCGGCCTTCTGGCA
GGTGTATGGGGAGATGGCCGGGTGAGAGTCATCGATGTCAAACTGAGTCG
TGACCCAAACCAGACTGAATACTATAAATTGCAATCCCCCGTCTTCGAAG
CAAAACCACATTCGACCGTATGTACATCTGTAACATGGCTCTCCCCGAGC
GACATCGCCGTAGGCTGTGCCAACGGATTCGTCGCCATCTGGAGCATCGT
CTCATCGCCATCCTCACCCTCCAATCCCATCCCCTACTTCTACCAGCAAC
TGCACTCGACATGGATCCTCAACCTCGCCTCTGCCTACCCGACCCATCCC
TATCTCATCAGCACCACCTCCATGGACGGCGAAAGCCGACTCACCTCCAT
TATCGACCCTCAAAAAGACAGCGTCAATGCAAACCGCATGCGCGTAGGCA
CCGCGCACCTCACCTACTCCCCACTTCTGCACTCCTTCGTCTCGGGCGAC
GAGAACGACTTTCTGCGCCTCCTCGCCATCCGTCGCTTCTTCACTTCCAC
CGCCGTGGCTCGGCTCCCGAGTATGATCTCCGCCCTCGGACCCTGCAGCT
TCTGGCACCCAAGCCTCCTCGTCGGCTGCACCGGCGGCACCGTGCAAGCC
ACGAATCCCCTCCGCCGGATGATGCACGCCAAGGAGAAACAATGGCAACA
GACTTGGTTCCAGCATGAATGGGTGCGAGGCTCAGGCACGGGCACAGGCA
CTAGCCGGTTTCACGACGGTTACCGCGCCGAACACACCAGCTTGCTGCGT
AATCTGGTCGGTGACCCGAGACTGATCAATGGCACGGCGGTGATTACGGT
ATTCGATGAAGAAACACACGTCACTGCGCTCTCGTGGAACCCGAATCGGG
TGTGCGCTGGGTGGGCTGCGGCTGGGATGGGATGTGGCTTGGTTCGGGTT
GAGGATTTAGCGTTGTCGTGAATGCCTCGGCCCCGCAGGTCCAATCGCGC
CTCTAGCGCCAGGACAAAATATATCCATGACCCCTTCGAAGCGGCCGGTT
TTAGCGACGAAGGAGAGGGCCCCGCTACCTCCGAAACCCCGCAGCGCAGA
AAGGGCAAGGGAAAGGCTAAACAAGCTGTCGCGGACGAGGGTTCTTCGGA
CGAAGACTTTGCAATGGATGATGCCAACGGAGATGACGACGACGATGATG
ATGAGTACAATGATAATGACGTGGAAATGGTCCTTGAGAATGAAGATGAA
GATGCAGAGGAAGACGACGATGCGTCGGCCTCAGAAGTTGACGCGGGCAG
TCGTCGTCAGCGGAAAAAGCCCGCTGCTGCCGCTATGCCAAAGCCTAGCA
GCAGCGTTAAGCGGCGTCGTCCGGATGGGAGTCTTGCTGTGCCCGGGGAA
GAGACGCATTCGCGCGGATCGTGGAACCCCCTTGAGCATGTTGGAAAGGC
AGTTCATCTACGCGTTACATTTGGCACAGATGAGAGGGATATACTTTCCA
TTATAAGTGCGCGGGATCGCTGGTACAAGGGGGTCGATTCTACGTTTCCG
ACGCGCGAGTCATTGAACGAGTCGCATGATATGCCGGATTATGGATATGG
GAACTCGTTTGGCTTGGAGGCCGAGGACATGAAACGGGAAAGCTCCCGTG
CATGGGATTGGTACTATAGTAAGGATGTGGGTGCACACTTTAGGAAAAGG
CAGCGCGTCCAGAAGATTAAGGAGAATGAAGCTCGCTCGGTCTACTTTCC
TAGTTCCAGAGGACCACATACCGTGCTCGCTGGCCCGGTTGATGAGCAGA
AGGTCTTTTCCCTCGCTCAGCATGATGTGCTTGATTTTGGCGAGGCATGG
GAGGGCGATGCTTCTACATCTCAGAAACAGGGGAAGCAGGCTGGGAAGCA
AGCCAAGACGAAACAGCCTGAAAGAAAGAGAAGGAAACGAGAGGGTTGGC
TTCTTAATCTAGGGAACAAAGTCCAATGTTTGGCCTGGGTGCCAAATCAA
ACTGGCCTCACGCAGTATCTGTCCGTCGTGGCTCCAATCCTACCGGACCA
AAAGGAGCAGTATCCAGATCCGTACAAGGACCAGGCGGCTCCAGCATTCA
GACCTTCAGCGCCGTATCCGTCTGCGCTGCAGCTTTGGGAGCTCAAGGCC
GAAGAAGCCGCGTCACTGACCAAGACAATCGATATGACATCCAAGCCGCG
ATTACGCCTCGCGCTGTGCACTGATTGGGGCGATCTGAGGCGAATGGCCT
GGTGCCCGATGCCTCGAGACCCGCGGAACGAAGACGACAAAGACGCGCAG
AAGAGCGTCGGCCTTCTGGCAGGTGTATGGGGAGATGGCCGGGTGAGAGT
CATCGATGTCAAACTGAGTCGTGACCCAAACCAGACTGAATACTATAAAT
TGCAATCCCCCGTCTTCGAAGCAAAACCACATTCGACCGTATGTACATCT
GTAACATGGCTCTCCCCGAGCGACATCGCCGTAGGCTGTGCCAACGGATT
CGTCGCCATCTGGAGCATCGTCTCATCGCCATCCTCACCCTCCAATCCCA
TCCCCTACTTCTACCAGCAACTGCACTCGACATGGATCCTCAACCTCGCC
TCTGCCTACCCGACCCATCCCTATCTCATCAGCACCACCTCCATGGACGG
CGAAAGCCGACTCACCTCCATTATCGACCCTCAAAAAGACAGCGTCAATG
CAAACCGCATGCGCGTAGGCACCGCGCACCTCACCTACTCCCCACTTCTG
CACTCCTTCGTCTCGGGCGACGAGAACGACTTTCTGCGCCTCCTCGCCAT
CCGTCGCTTCTTCACTTCCACCGCCGTGGCTCGGCTCCCGAGTATGATCT
CCGCCCTCGGACCCTGCAGCTTCTGGCACCCAAGCCTCCTCGTCGGCTGC
ACCGGCGGCACCGTGCAAGCCACGAATCCCCTCCGCCGGATGATGCACGC
CAAGGAGAAACAATGGCAACAGACTTGGTTCCAGCATGAATGGGTGCGAG
GCTCAGGCACGGGCACAGGCACTAGCCGGTTTCACGACGGTTACCGCGCC
GAACACACCAGCTTGCTGCGTAATCTGGTCGGTGACCCGAGACTGATCAA
TGGCACGGCGGTGATTACGGTATTCGATGAAGAAACACACGTCACTGCGC
TCTCGTGGAACCCGAATCGGGTGTGCGCTGGGTGGGCTGCGGCTGGGATG
GGATGTGGCTTGGTTCGGGTTGAGGATTTAGCGTTGTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007367-T1.utr5p1 | KJC3_007367-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007367-T1.utr3p1 | KJC3_007367-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2249428..2252015 + |
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