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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2282206..2284215- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007377-T1 ID=KJC3_007377-T1|Name=KJC3_007377-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2010bp|location=Sequence derived from alignment at ch5:2282206..2284215- (Aspergillus niger KJC3)
GTAAGTAACAGTAGTAGTCTTGTCCTTCTTCCAGCTGGTACTAAGAGTCT
GGGTCCGACTGAGACACCGTCTGACTTGCTGACTGAGATATTTGCTTCTG
CTACTGCTGCTTCTGCTGGGGGCAGAGTGCAGATGTTGGAGCTGCCTAAT
AGGGCTGTGACTCTCAACTCTCTCTCCCCTCCGTTCTCGCCTCCAAGTTC
TCTCTCTTTCTCTCTCTCTCTCACCGTCTGGTGACTGACCCAACTTGACT
AACCTCCCTCTCCACACATGATGCAGTGCTTGTTTCCGTAATTCCCCGTC
CACTCCTCTACTACTGTTGTATCCACCCCCTCTTGCGTCTCCCACATCAT
GGCTTCCCTCCCAGGTTATTCGGCCTCTAGTCGGCCACAATCATCTGATA
ATAATACTACCTCCACTACTCAACAGAACAGCGTATCCACGAATATAACC
AGCAGCGCTTCATCAACGGAATCATTTGAAACTAGCGATACCGTCCTGCT
CAACGGCACCTCGGATACCGCCACCGCCCGTGGCTCCCCGACGAGTCCGA
CCCTCGCCGATGCGTCTGGTGAGGAACCACGCAGATGTTGGATTTGCTAT
ACAGATGAGACCGAGGACTCTCCCCTCAATTCACAATGGCGCTCGCCATG
TCCTTGCGCCTTGACCGCCCACGAAGCTTGCCTGCTCGACTGGTTGGCGG
ATCTCGAGAATCCCCGATCGCGGAGGCGCAACGGCCATGACGCAAAGATG
CTGTGTCCGCAATGCAAGACTGAAATTATCGTTTCCCGTCCCCGAAGCTA
TATTGTGGATGTAGTGCGACTGGTTGAACGCCTCGCGGGTCGGATGGTTC
TTCCAGGAATGGTATTTACGTTGGGGGCAACCGTGTGGGCGGGGTGCTGT
GCGCACGGAGTATACTCGATGTATTTTGTCTTTGGGACAGACGAGGCTCG
CCAGATCTTGGAGGAAACGGCAGATGGGGCATGGAATTCGGGGCTTAACC
TGGGCTTGCCCCTCATCCCGCTCGTGTTGATCTTCTCGCGCACTCGGTAT
GCAGATGGTCTTCTCCCCGCCATCCCCGTGATGTTCTTTGCCACACATCA
ACCCGGACAGGAGCTGGAGTTGGATCTCTGGCCGCCCAGTGCGGCAGTCA
CGTTTGCCGCTCTTCCGTATCTGAAAAGCTTTTACGGCAGTATCTACGAG
AGAATGTTCGGCAAGTTGGAGCGGAGGTGGATTGCGGAAGTACAACCGCG
CCAGTCGGATGTCAATGAGTTTGATGATAATGCGCCGCCCGAACATCCCG
AGCCAGACCCACCTAATGATGACAACGGTGTTCTGATGGAGATCGATTTG
GAGCTACGCATGGGCAACGAAGATGGGCCGCAGGGCTTGTTCGGCTTTAA
TGGAGGAAATGCGCAGGGTGGACAAGGGCAGAACCAGGGTGGAAACGGCC
AACCCTTGGGCTTGGGACGACGGGATGAGCTGGTAGCCGACACAAGCAGT
CTGGCGGATATCATCCTCGGAGCACTTGCGTTTCCCGCCATATCTGCGTC
GATGGGCGGGCTGTTGAAGTACCTCTTGCCAACTTCATGGACGACGCCAT
CTACTCTGGGAAAGGTCCGACCAGGACTGCTGCAGACCCGCTGGGGCCGG
AGCGTAGTTGGCGGATGTGCGTTTGTGCTATTGAAGGATGCGTTGGTTTT
ATACTGTCGGTGGAAATTGGCGCAGACACACCGACGCCGCAAGGTGCTGA
ACTACGATCGTTCGAAGAAGCGGGTCGGGAAGGCTGGTAGTTGATAGCTG
GGGAAGTATCAGTTTGGGGAGAAGCGATGGATGCATTTCTGGCGTTTAGG
CTGATGGATTGAGATACACTCTTTGCTGGTTCTTTTTTTACCTCCTTGCA
ATTGATGACGAGCGATGAGCTTGGGCAGATGCCTTAGGTAAAAGTGTGAA
TACGTACCATTTCAACATTTTCTATAAGTAACAGTAATTGTCAACAAGAC
TTTACAAATT back to topCoding sequence (CDS) from alignment at ch5:2282206..2284215- >KJC3_007377-T1 ID=KJC3_007377-T1|Name=KJC3_007377-T1|organism=Aspergillus niger KJC3|type=CDS|length=1446bp|location=Sequence derived from alignment at ch5:2282206..2284215- (Aspergillus niger KJC3)
ATGGCTTCCCTCCCAGGTTATTCGGCCTCTAGTCGGCCACAATCATCTGA
TAATAATACTACCTCCACTACTCAACAGAACAGCGTATCCACGAATATAA
CCAGCAGCGCTTCATCAACGGAATCATTTGAAACTAGCGATACCGTCCTG
CTCAACGGCACCTCGGATACCGCCACCGCCCGTGGCTCCCCGACGAGTCC
GACCCTCGCCGATGCGTCTGGTGAGGAACCACGCAGATGTTGGATTTGCT
ATACAGATGAGACCGAGGACTCTCCCCTCAATTCACAATGGCGCTCGCCA
TGTCCTTGCGCCTTGACCGCCCACGAAGCTTGCCTGCTCGACTGGTTGGC
GGATCTCGAGAATCCCCGATCGCGGAGGCGCAACGGCCATGACGCAAAGA
TGCTGTGTCCGCAATGCAAGACTGAAATTATCGTTTCCCGTCCCCGAAGC
TATATTGTGGATGTAGTGCGACTGGTTGAACGCCTCGCGGGTCGGATGGT
TCTTCCAGGAATGGTATTTACGTTGGGGGCAACCGTGTGGGCGGGGTGCT
GTGCGCACGGAGTATACTCGATGTATTTTGTCTTTGGGACAGACGAGGCT
CGCCAGATCTTGGAGGAAACGGCAGATGGGGCATGGAATTCGGGGCTTAA
CCTGGGCTTGCCCCTCATCCCGCTCGTGTTGATCTTCTCGCGCACTCGGT
ATGCAGATGGTCTTCTCCCCGCCATCCCCGTGATGTTCTTTGCCACACAT
CAACCCGGACAGGAGCTGGAGTTGGATCTCTGGCCGCCCAGTGCGGCAGT
CACGTTTGCCGCTCTTCCGTATCTGAAAAGCTTTTACGGCAGTATCTACG
AGAGAATGTTCGGCAAGTTGGAGCGGAGGTGGATTGCGGAAGTACAACCG
CGCCAGTCGGATGTCAATGAGTTTGATGATAATGCGCCGCCCGAACATCC
CGAGCCAGACCCACCTAATGATGACAACGGTGTTCTGATGGAGATCGATT
TGGAGCTACGCATGGGCAACGAAGATGGGCCGCAGGGCTTGTTCGGCTTT
AATGGAGGAAATGCGCAGGGTGGACAAGGGCAGAACCAGGGTGGAAACGG
CCAACCCTTGGGCTTGGGACGACGGGATGAGCTGGTAGCCGACACAAGCA
GTCTGGCGGATATCATCCTCGGAGCACTTGCGTTTCCCGCCATATCTGCG
TCGATGGGCGGGCTGTTGAAGTACCTCTTGCCAACTTCATGGACGACGCC
ATCTACTCTGGGAAAGGTCCGACCAGGACTGCTGCAGACCCGCTGGGGCC
GGAGCGTAGTTGGCGGATGTGCGTTTGTGCTATTGAAGGATGCGTTGGTT
TTATACTGTCGGTGGAAATTGGCGCAGACACACCGACGCCGCAAGGTGCT
GAACTACGATCGTTCGAAGAAGCGGGTCGGGAAGGCTGGTAGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007377-T1.utr3p1 | KJC3_007377-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007377-T1.utr5p1 | KJC3_007377-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011016 |
| DBxref | InterPro:IPR013083 |
| DBxref | PFAM:PF12906 |
| DBxref | PFAM:PF11793 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2282206..2284215 - |
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