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KJC3_007378-T2, KJC3_007378-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007378-T2
Unique NameKJC3_007378-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2284436..2287863-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007378-T2 ID=KJC3_007378-T2|Name=KJC3_007378-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3428bp|location=Sequence derived from alignment at ch5:2284436..2287863- (Aspergillus niger KJC3)
CCTAATTACTAAATGATGTAGTCCGTGAGTTGTAATCGATTTTTATCCCT
TATGTCTCTTGGTTGCTATGAGGACTAGGAGTATGTCAGCAGTAAACCGG
GCTAGTTGATTACAGGATCGTATAGCAGTTGGAACCTTGACACAAAAGGC
CGCACCATGACAATTAATAGCAAAGAAATATACGTCGTTGTGCAACGTTT
GTTTCCATCATCAACATCCCTCGCCTGTATTATTGCAATTTTGCAAGGCG
TTGCTCTGGTAAAGACCAGGACGAAACGAGGGTCTTGCATCCCAATCAGG
TGACCGCTTTCGCGTCCAGAAGGCCGATGATCGGAGCAGTGGAGTATCCG
TAGCCAATGGGAAGACCGAGATTATTCGACTCCAACGGCGCTAGACCGGG
ACAGGCTAGAATGCAACCATAACTGTCCCCGAAGTCTGAGTCTTCGCTCC
TGCCTTAAGGAACGGATCTCTTACTCACACTTCCTGGTCCCATTCTTTTT
CCCCGTTGTGAGCACTCCCCTTTCTCTGTTCCCCAGGCCTGGCAGTCATC
CGCCATCAAGATGATGCCTATGAGACCTTCTAAAAGCGCCATGCGCGCTC
TGCATTATCAGAGGTATATCGCCTCCGGCAGAATGACTTTTACCACTGCT
TCCGTTGCTGCGACCGCGCCCCACCGCTTTTCAGCTCAGAAGAGATTCCA
GAGCACCGCAACTGCCCCGGCTGAGTGAGTATTATCTACAATTAGCATCC
AGATAGCTACTGGGCTGTCAATGACTGTTGCTAACATGTCTGTGAATTTC
CAGAGGCACAAGACCTGTCCCCAGCCCTGCCTTCAACCAGGAACCTCACC
GCAATGAGGTCTCGCCACTGCAAAATCGCCAGGTCCCCGAACTGGACGAC
TCGTATGCAGTCCCTTCAACAACATAGATGACTCATGGGAGTAGAGCTGA
CCTGGTTCTTGGAGCGTAAACAGTTTTGTCGGACTCAGTGGAGGAGAGAT
CTTTCATGAGATGATGCTGCGTCTTGGCGTCAAGCATGTCTGTGAGTCAC
GCGTCTTTTTTCTCGGTTTCCCGATGTTCTTCAAGACCGTAAGATTGACC
CACTACTTTTAGTTGGTTACCCTGGAGGTGCCATTCTTCCCGTCTTCGAT
GCTATTTACAACTCCAAACACTTCGACTTCGTTCTTCCGAGACATGAACA
GGGCGCCGGACACATGGCCGAAGGCTACGCCCGTGCCTCTGGAAAGCCCG
GTGTCGTCCTTGTCACCTCCGGCCCTGGAGCCACCAACGTTATCACCCCC
ATGCAGGATGCCCTCTCGGACGGTACCCCCATGGTCGTCTTCTGCGGTCA
GGTGCCTACCAGCCTGATCGGTACCGATTCTTTCCAGGAAGCCGATGTTA
TCGGTATCTCTCGCGCTTGCACCAAGTGGAACGTCATGGTCAAGTCCGTC
GCTGAACTCCCCCGTCGCATCCAGGAGGCCTTCGAAATCGCCACCAGCGG
CCGCCCCGGACCTGTCCTCGTCGATCTGCCCAAGGATATTACCGCCGGTA
TTCTCCGTAAACCCATCCCCATGAACAGCACCCTGCCCTCTCTCCCCAGC
GCTGCGACCATGGCCGCCCGCGAACTGAGCATGCAGCAGCTGCAGGGTAC
CATCAACCGTGTGGCCCGCCTCGTGAACGTTTCCAAGAAGCCCATCCTGT
ATGTGGGTCAGGGTCTCCTTGCTCGCCCTGAAGGACCCCAGATCTTGAAG
GAGCTGGCCGACAAGGCTTGCATTCCGGTCACCACCACTCTCCAGGGTCT
GGGTGGGTTCGACGAAACGGACCCCAAGGCCCTGCACATGCTGGGAATGC
ACGGATCTGCCTATGCCAACATGGCCATGCAGGAGGCTGATCTCATCATC
GCTATCGGTGCTCGCTTCGATGACCGTGTGACTGGTAACATCTCCAAGTT
TGCCCCCCAGGCCAAGCTTGCTGCCTCGGAGAACCGTGGTGGTATCGTCC
ACTTTGAAATCATGCCCAAGAACATCAACAAGGTTGTCCAGGCCAACGAG
GCTGTTGAGGGTGACTGTGCTGAGAACATCCGTCTCCTCCTGCCCCACGT
CGAGCCCGTTGCTGAGCGCAAGGAGTGGTTCGAGCAGATCAACGACTGGA
AGGCTCGCTTCCCCTTCTCCCTTTATGAGAAGCAGACTGCTGAAGGACCC
ATCAAGCCCCAGGCTGTGATTGAGAAGCTCAGCGATCTCACCGCTCACAT
GAAGGACCGCACTGTCATCACTACTGGTGTCGGTCAGCATCAGATGTGGG
CTGCTCAGCACTTCCGCTGGCGCCACCCCCGTACCATGATCACCTCTGGT
GGTCTTGGAACTATGGGATACGGTCTCCCCGCTGCCATTGGTGCCAAGGT
TGCCCGCCCTGACGCTCTTGTCGTTGATATCGATGGTGATGCCTCGTTCA
ACATGACCCTGACTGAGCTCACCACTGCTGCTCAGTTCAACATTGGTGTG
AAGGTTCTCCTCCTGAACAACGAGGAACAGGGTATGGTGACGCAATGGCA
GAACCTGTTCTACGAGGACCGGTACTCGCACACTCACCAGAAGAACCCCG
ACTTCGTTCCCATGGCCCAGTCCATGGGTGTTGCTGCCGACCGCTGCACC
AAGCCCTCGGAGGTTGAGGCGAAGCTCAAGTGGCTGATCGAGCAGGACGG
CCCTGCCCTTCTGGAAGTGTTTACTGATCGCAAGGTGCCTGTGCTCCCCA
TGGTGCCCGCTGGCTGTGCCCTGCACGAGTTCCTTGTCTATGACGAAGGT
ATGCACTATAATTCTTTTTCTGATTGGGTGAATGAATGCTAATATAATTT
TTCGCAATACAGCCAAGGAGAAGGAGCGCAAGGCTCTGATGAAGAAGCGG
AAAGTTCCCGGTTTCTAAGTGATGCCGCGGACGCTAGCGATGAGTTGCCA
TGCCTGTTATTTGAAAGCTGCAAAAGTGCCCACCCATTTCTGATCTCTTG
ATATCCATGGCGTTTCTGGCAGGTTCTAAAACGCTAGCGGGTGCCGGTCT
GCGCCCCGGAGACAAGCTGCAGCGGTCAACTCCCGACGAGAGAGCCCTGG
ACTAGCATGCTGCAGGACCGCGAAGAGCATTCTATAATGGCTCCACTCAG
TCCTGTACAGCGGTCCTGGGCTGAAATTGACCTCTAGCTGGGCTTGGACC
TCCTTATCTTTTTTTTTTTTTCTTTTTCTCCCTCCATTTTCACCGTTTGC
ATTATGGCTTGCGCGCAAAAGTTGCCTCGAATGTTGTGGGAAATCCAGCT
GTATATAATCCTTATGTTGCTGTAATCTTTTGTATGACCTTGGAGAAATA
CTATCATGAGGCATTGAAAAGGGAGGAGTGTTCCTGAATGACGCGATGAT
TAGTGCTGACTGGAGCAGCTACGTAGAG
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Coding sequence (CDS) from alignment at ch5:2284436..2287863-

>KJC3_007378-T2 ID=KJC3_007378-T2|Name=KJC3_007378-T2|organism=Aspergillus niger KJC3|type=CDS|length=3282bp|location=Sequence derived from alignment at ch5:2284436..2287863- (Aspergillus niger KJC3)
CCAAGGAGAAGGAGCGCAAGGCTCTGATGAAGAAGCGGAAAGTTCCCGGT
TTCTAAATGGCCGAAGGCTACGCCCGTGCCTCTGGAAAGCCCGGTGTCGT
CCTTGTCACCTCCGGCCCTGGAGCCACCAACGTTATCACCCCCATGCAGG
ATGCCCTCTCGGACGGTACCCCCATGGTCGTCTTCTGCGGTCAGGTGCCT
ACCAGCCTGATCGGTACCGATTCTTTCCAGGAAGCCGATGTTATCGGTAT
CTCTCGCGCTTGCACCAAGTGGAACGTCATGGTCAAGTCCGTCGCTGAAC
TCCCCCGTCGCATCCAGGAGGCCTTCGAAATCGCCACCAGCGGCCGCCCC
GGACCTGTCCTCGTCGATCTGCCCAAGGATATTACCGCCGGTATTCTCCG
TAAACCCATCCCCATGAACAGCACCCTGCCCTCTCTCCCCAGCGCTGCGA
CCATGGCCGCCCGCGAACTGAGCATGCAGCAGCTGCAGGGTACCATCAAC
CGTGTGGCCCGCCTCGTGAACGTTTCCAAGAAGCCCATCCTGTATGTGGG
TCAGGGTCTCCTTGCTCGCCCTGAAGGACCCCAGATCTTGAAGGAGCTGG
CCGACAAGGCTTGCATTCCGGTCACCACCACTCTCCAGGGTCTGGGTGGG
TTCGACGAAACGGACCCCAAGGCCCTGCACATGCTGGGAATGCACGGATC
TGCCTATGCCAACATGGCCATGCAGGAGGCTGATCTCATCATCGCTATCG
GTGCTCGCTTCGATGACCGTGTGACTGGTAACATCTCCAAGTTTGCCCCC
CAGGCCAAGCTTGCTGCCTCGGAGAACCGTGGTGGTATCGTCCACTTTGA
AATCATGCCCAAGAACATCAACAAGGTTGTCCAGGCCAACGAGGCTGTTG
AGGGTGACTGTGCTGAGAACATCCGTCTCCTCCTGCCCCACGTCGAGCCC
GTTGCTGAGCGCAAGGAGTGGTTCGAGCAGATCAACGACTGGAAGGCTCG
CTTCCCCTTCTCCCTTTATGAGAAGCAGACTGCTGAAGGACCCATCAAGC
CCCAGGCTGTGATTGAGAAGCTCAGCGATCTCACCGCTCACATGAAGGAC
CGCACTGTCATCACTACTGGTGTCGGTCAGCATCAGATGTGGGCTGCTCA
GCACTTCCGCTGGCGCCACCCCCGTACCATGATCACCTCTGGTGGTCTTG
GAACTATGGGATACGGTCTCCCCGCTGCCATTGGTGCCAAGGTTGCCCGC
CCTGACGCTCTTGTCGTTGATATCGATGGTGATGCCTCGTTCAACATGAC
CCTGACTGAGCTCACCACTGCTGCTCAGTTCAACATTGGTGTGAAGGTTC
TCCTCCTGAACAACGAGGAACAGGGTATGGTGACGCAATGGCAGAACCTG
TTCTACGAGGACCGGTACTCGCACACTCACCAGAAGAACCCCGACTTCGT
TCCCATGGCCCAGTCCATGGGTGTTGCTGCCGACCGCTGCACCAAGCCCT
CGGAGGTTGAGGCGAAGCTCAAGTGGCTGATCGAGCAGGACGGCCCTGCC
CTTCTGGAAGTGTTTACTGATCGCAAGGTGCCTGTGCTCCCCATGGTGCC
CGCTGGCTGTGCCCTGCACGAGTTCCTTGTCTATGACGAAGCCAAGGAGA
AGGAGCGCAAGGCTCTGATGAAGAAGCGGAAAGTTCCCGGTTTCTAAATG
GCCGAAGGCTACGCCCGTGCCTCTGGAAAGCCCGGTGTCGTCCTTGTCAC
CTCCGGCCCTGGAGCCACCAACGTTATCACCCCCATGCAGGATGCCCTCT
CGGACGGTACCCCCATGGTCGTCTTCTGCGGTCAGGTGCCTACCAGCCTG
ATCGGTACCGATTCTTTCCAGGAAGCCGATGTTATCGGTATCTCTCGCGC
TTGCACCAAGTGGAACGTCATGGTCAAGTCCGTCGCTGAACTCCCCCGTC
GCATCCAGGAGGCCTTCGAAATCGCCACCAGCGGCCGCCCCGGACCTGTC
CTCGTCGATCTGCCCAAGGATATTACCGCCGGTATTCTCCGTAAACCCAT
CCCCATGAACAGCACCCTGCCCTCTCTCCCCAGCGCTGCGACCATGGCCG
CCCGCGAACTGAGCATGCAGCAGCTGCAGGGTACCATCAACCGTGTGGCC
CGCCTCGTGAACGTTTCCAAGAAGCCCATCCTGTATGTGGGTCAGGGTCT
CCTTGCTCGCCCTGAAGGACCCCAGATCTTGAAGGAGCTGGCCGACAAGG
CTTGCATTCCGGTCACCACCACTCTCCAGGGTCTGGGTGGGTTCGACGAA
ACGGACCCCAAGGCCCTGCACATGCTGGGAATGCACGGATCTGCCTATGC
CAACATGGCCATGCAGGAGGCTGATCTCATCATCGCTATCGGTGCTCGCT
TCGATGACCGTGTGACTGGTAACATCTCCAAGTTTGCCCCCCAGGCCAAG
CTTGCTGCCTCGGAGAACCGTGGTGGTATCGTCCACTTTGAAATCATGCC
CAAGAACATCAACAAGGTTGTCCAGGCCAACGAGGCTGTTGAGGGTGACT
GTGCTGAGAACATCCGTCTCCTCCTGCCCCACGTCGAGCCCGTTGCTGAG
CGCAAGGAGTGGTTCGAGCAGATCAACGACTGGAAGGCTCGCTTCCCCTT
CTCCCTTTATGAGAAGCAGACTGCTGAAGGACCCATCAAGCCCCAGGCTG
TGATTGAGAAGCTCAGCGATCTCACCGCTCACATGAAGGACCGCACTGTC
ATCACTACTGGTGTCGGTCAGCATCAGATGTGGGCTGCTCAGCACTTCCG
CTGGCGCCACCCCCGTACCATGATCACCTCTGGTGGTCTTGGAACTATGG
GATACGGTCTCCCCGCTGCCATTGGTGCCAAGGTTGCCCGCCCTGACGCT
CTTGTCGTTGATATCGATGGTGATGCCTCGTTCAACATGACCCTGACTGA
GCTCACCACTGCTGCTCAGTTCAACATTGGTGTGAAGGTTCTCCTCCTGA
ACAACGAGGAACAGGGTATGGTGACGCAATGGCAGAACCTGTTCTACGAG
GACCGGTACTCGCACACTCACCAGAAGAACCCCGACTTCGTTCCCATGGC
CCAGTCCATGGGTGTTGCTGCCGACCGCTGCACCAAGCCCTCGGAGGTTG
AGGCGAAGCTCAAGTGGCTGATCGAGCAGGACGGCCCTGCCCTTCTGGAA
GTGTTTACTGATCGCAAGGTGCCTGTGCTCCCCATGGTGCCCGCTGGCTG
TGCCCTGCACGAGTTCCTTGTCTATGACGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0003984acetolactate synthase activity
GO:0000287magnesium ion binding
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV2_2KJC3_007378Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007378-T2KJC3_007378-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007378-T2.cdsKJC3_007378-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007378-T2.utr3p1KJC3_007378-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007378-T2.exon3KJC3_007378-T2.exon3Aspergillus niger KJC3exon
KJC3_007378-T2.exon2KJC3_007378-T2.exon2Aspergillus niger KJC3exon
KJC3_007378-T2.exon1KJC3_007378-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007378-T2.utr5p2KJC3_007378-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007378-T2.utr5p1KJC3_007378-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR039368
DBxrefInterPro:IPR000399
DBxrefInterPro:IPR011766
DBxrefInterPro:IPR012846
DBxrefInterPro:IPR012000
DBxrefInterPro:IPR012001
DBxrefPFAM:PF02776
DBxrefPFAM:PF00205
DBxrefPFAM:PF02775
Product variant 2
Product mitochondrial
ProductAcetolactate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2284436..2287863 -
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