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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2293254..2296612+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007381-T1 ID=KJC3_007381-T1|Name=KJC3_007381-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3359bp|location=Sequence derived from alignment at ch5:2293254..2296612+ (Aspergillus niger KJC3)
GCTCACTTTCATTCCCTTGCGTTTCATTTCATGCAGGCCTGCGGTTCCTG
CTCCCCCTTTCTTTCTTCGTCAGAGTCTTGAATCCGTCAGGTGGCTGAGT
TATTTTGCTGCTCCTGTCTTCCGAACCCCAGAGCCCCAGGTTTCGAACGA
CGCCATTCCCCGCATCCCTTCGTTGAGTGAATATGGCAGGAAAGGTAGCA
CGATAGATAGAAGACGATAAGCGGGATCGGAATTCAAGTGCTGCATTTTT
CTTCTACCGAAACTAAACCAGGACTAATACTGTGGATGCGATGACAAGCA
GTGAGTGAGTGCCTTGTGTTTCTGTTTAGCTCGATCTTATTTCCGTGCAC
ATAGAATCGCTGACGCGCCGCTATTGCAGTGGCCGAGATCTCGTGGCCAC
CGAAGTCCCCTCGGGATGCTCTCTTGAGTACTCCGAATGGTCGCAAGAGG
TATGAAGACATGCAGCGACGCCGCGAGCACCTGGGTTCGCCTTTGAAACA
CTCTGTCACTACCCCCGATTTACGATCCAAGGCGTCACAACTTCTCAGCG
ATGGGGTAGACGAGGGCGAAGATGATGAGGACGAGGAAACACTACAGTTG
AAGCTTGCAGCCATTGAGGCGCGTCTCAAGCTCAAGCAACTTCAGAAAAG
TCGCACGAAAACGGGGACACCTGGACCGGATAAGCATGGCGGGGAGACTT
TCTCTAGACCTGCGTCAGCAATTGGCTCTTTCCAGGGACAGGATGAGCCG
ATAGGGACAAGAAACAATGGCCATGGGACGGATAGCACTGCTCATATTGA
TGATGTCCAGGTACCGCTGTCGCCGACGAGACGTGCTGCTCCTCCCACAG
ACCCTGTGTCCCCGCGGAGGTATTTGTTAGGCATTGACAAAGGTCTCAGA
AGTAGGGATGTGTCGCTGAAGCGTCCACCCAGCTCACGAGGGGCTAATCC
GCCGGCAAGTAGGCCCGGAACGCGAGAAGGTTTAGTCTCTCGATCTGGCA
GTCTTCTGCAAGCAATAACCGTGGGTGGGGAGCGCAGCCGTCCAAAAAGC
TTTAGTGAACGTATGGCTGAGAGCCGGTCGGCCGATGCGTCTCGGAGAGA
ACGAGCAGCACGAATGGAGAAAATTCAGGCGAATCGAAGCTCAGCCTTCC
AGATCGACAAGGCAGAAGTGGAGGCCTTCAAAGCAGCTGCCGAGTCAAGG
AAGGACGTTCCAGGTTCGCCAACGAGGAGGCGACGGGCCGAAAGCTTCAG
TCGAGAAGATGTCCTCCGGTCATATAATCTCAAGCCGTCGCTGAAAAGGG
GCCGGAGCCAGACCACGTCTAGCGTACAGAGATCTGATGATGGTGTGGCT
GATGCGAAGGAGTCACTGCCATATTTTCACCGACGGAACCACAAGTCTGA
GTCTGAGGTACCTGCCAGCTCTCAAAATAGTGCAACCGATGATTCTCAAG
GCGAGAAAAGTGGGGACTCCTCGAAGTTTGAAGCCTTCTCTTCATTGCAC
TTGTCCAACCGCATCTTACCCCATTCGTTCTTGTCTCGAACCCTGGAAGA
CAAGAAAGCTCTCCGAATCCCTGATCTGCTACGCACAGTGAAGGCGCCTG
ACTTTGAACTGCCGGAGGATATCGACACAGACTACGTTGTGTTCGGTATA
GTAGCATCGAAATCAGAGCCTAGGCAAATAAAGCAACCGGCCAACGCTAC
TAAGAAGGAAGTCGATCCATTCGACGATGGAACGAACAATACCAACCAAT
ACATGGTCATCACTCTGACGGATCTGAAGTGGACGATTGATCTCTTCCTA
TTCGATACTGCCTTCCCACGATACTACCGAATCTCCGAAGGGATACTCAT
TGCCATTCTAAATCCTACAATAATGCCACCACCAAAGAACAAGACCGACA
CCAACAGATTCAGTCTCGCCATTTCCTCCTCTGATGACAAGATCCTTGAG
GTCGGCTATGCGCAAGACATTGGATTCTGCAAGGCCGTCAGGAAGGACGG
CAAGTCCTGCCACTCTTGGGTTGATGGCCGGAAGACAGAATTCTGCGACT
TCCATGTCGACCTACAGGTCCGTCGAACACAAGCAGGTCGAATGGGAGTA
AACGGCGGCACAGGCATGTATGGTCCTGGCGGCCGCTCAGGGTCTCGAAC
CGGTTTCTACGGCGGTGACAAGAAAGGTCGTCCCCAAAAAGGACTGAAGC
CAAACGGCGCAAGATACGACTACCAATCACAATCATCATACTACGTTGCG
CCAGCTCCAAAATCCAGGGGCGGCGGTTCCTCCTTTCACCCTCACCCGTC
TGGTCAATCTGCCGCAGCCCTAATCGATGCAGATCATGACGACCCATTCA
TCGCTGCGGGGATGATGGGCCGTGGCATGGAAAGCAAAGAGGAGCGCTTC
CGCAGACGGCTCGCGGAGAAGCAACGCGAACGCGACATCGCAGACAAGCT
GATCTCCCGTACTGGAGGTGTTGGTGCTGAATACCTTCGATCTCGAGATA
ACGACAATGTCCAATCAACCCGTCCCGAGCAGGCAAAGAACAACTTAGAT
GCGTTTTCCACCACAAATCTGGGCATCTCGAACTTCAGGAAAGCAGACAG
CGTGAAGTTGAGCCCATTGAAACGCGCTCATGACGGTGACAGACCCCACG
GCAGCGGTGTCAAGAAGACCCGGTTCATCACTTCCCATGGCATCAAGGAG
GCCGGAAGAGACAGTCTAGGAGGAAAGCCCGACATGGTGCCGACGAACTA
TGATGATGACGACGACGATGAACTAGACATCATCTAAAGAGAAAAAGCAA
CCCCTTTCCAGTGTTATGAAAAAACAAATATAGATACCCTTCGTTACCTG
CAACGCAGTTGACCCCGTCCTTCTACGGCGAATATCCCAATGAATTATCA
GTCATTCAGTGTCATTCACCATCAGCGCAACTCACTCGCTAGCCCGAATA
AACATAAACAACAGAGAACATAGTCGACTCGTTTTGTTTGACACCAACTT
ACCACTTTCATTCCACTTAGCAACAGAAACATGAACAGCAACAGAATTGA
TACACCGTCTTGGTATCCACTGGAATAGTCCCCTTCATTTCCCCTTACTC
GAACAAGAGAATGAATGAATGAACGAGATTTCTTTTCTAATTTGCCTTGA
CTTCCAATGAACGACTAACTGACTTATGACGTTTTGAGCACGCTTGTCTT
TCTCTATTTATTCTTTGTACGAGTACCCCGTTTCGTTCATCTTCCCGACG
CTGTCTTGCGGGTTATTTGGGAGATAAGTTGTATTATTAGCAAAGTACCC
ATTCTTAGCTTTTCTTTTTGAGAAATGAAAATACTGGTAGCCTGCTTTGA
ACAATTGAT back to topCoding sequence (CDS) from alignment at ch5:2293254..2296612+ >KJC3_007381-T1 ID=KJC3_007381-T1|Name=KJC3_007381-T1|organism=Aspergillus niger KJC3|type=CDS|length=4818bp|location=Sequence derived from alignment at ch5:2293254..2296612+ (Aspergillus niger KJC3)
ATGGCCGAGATCTCGTGGCCACCGAAGTCCCCTCGGGATGCTCTCTTGAG
TACTCCGAATGGTCGCAAGAGGTATGAAGACATGCAGCGACGCCGCGAGC
ACCTGGGTTCGCCTTTGAAACACTCTGTCACTACCCCCGATTTACGATCC
AAGGCGTCACAACTTCTCAGCGATGGGGTAGACGAGGGCGAAGATGATGA
GGACGAGGAAACACTACAGTTGAAGCTTGCAGCCATTGAGGCGCGTCTCA
AGCTCAAGCAACTTCAGAAAAGTCGCACGAAAACGGGGACACCTGGACCG
GATAAGCATGGCGGGGAGACTTTCTCTAGACCTGCGTCAGCAATTGGCTC
TTTCCAGGGACAGGATGAGCCGATAGGGACAAGAAACAATGGCCATGGGA
CGGATAGCACTGCTCATATTGATGATGTCCAGGTACCGCTGTCGCCGACG
AGACGTGCTGCTCCTCCCACAGACCCTGTGTCCCCGCGGAGGTATTTGTT
AGGCATTGACAAAGGTCTCAGAAGTAGGGATGTGTCGCTGAAGCGTCCAC
CCAGCTCACGAGGGGCTAATCCGCCGGCAAGTAGGCCCGGAACGCGAGAA
GGTTTAGTCTCTCGATCTGGCAGTCTTCTGCAAGCAATAACCGTGGGTGG
GGAGCGCAGCCGTCCAAAAAGCTTTAGTGAACGTATGGCTGAGAGCCGGT
CGGCCGATGCGTCTCGGAGAGAACGAGCAGCACGAATGGAGAAAATTCAG
GCGAATCGAAGCTCAGCCTTCCAGATCGACAAGGCAGAAGTGGAGGCCTT
CAAAGCAGCTGCCGAGTCAAGGAAGGACGTTCCAGGTTCGCCAACGAGGA
GGCGACGGGCCGAAAGCTTCAGTCGAGAAGATGTCCTCCGGTCATATAAT
CTCAAGCCGTCGCTGAAAAGGGGCCGGAGCCAGACCACGTCTAGCGTACA
GAGATCTGATGATGGTGTGGCTGATGCGAAGGAGTCACTGCCATATTTTC
ACCGACGGAACCACAAGTCTGAGTCTGAGGTACCTGCCAGCTCTCAAAAT
AGTGCAACCGATGATTCTCAAGGCGAGAAAAGTGGGGACTCCTCGAAGTT
TGAAGCCTTCTCTTCATTGCACTTGTCCAACCGCATCTTACCCCATTCGT
TCTTGTCTCGAACCCTGGAAGACAAGAAAGCTCTCCGAATCCCTGATCTG
CTACGCACAGTGAAGGCGCCTGACTTTGAACTGCCGGAGGATATCGACAC
AGACTACGTTGTGTTCGGTATAGTAGCATCGAAATCAGAGCCTAGGCAAA
TAAAGCAACCGGCCAACGCTACTAAGAAGGAAGTCGATCCATTCGACGAT
GGAACGAACAATACCAACCAATACATGGTCATCACTCTGACGGATCTGAA
GTGGACGATTGATCTCTTCCTATTCGATACTGCCTTCCCACGATACTACC
GAATCTCCGAAGGGATACTCATTGCCATTCTAAATCCTACAATAATGCCA
CCACCAAAGAACAAGACCGACACCAACAGATTCAGTCTCGCCATTTCCTC
CTCTGATGACAAGATCCTTGAGGTCGGCTATGCGCAAGACATTGGATTCT
GCAAGGCCGTCAGGAAGGACGGCAAGTCCTGCCACTCTTGGGTTGATGGC
CGGAAGACAGAATTCTGCGACTTCCATGTCGACCTACAGGTCCGTCGAAC
ACAAGCAGGTCGAATGGGAGTAAACGGCGGCACAGGCATGTATGGTCCTG
GCGGCCGCTCAGGGTCTCGAACCGGTTTCTACGGCGGTGACAAGAAAGGT
CGTCCCCAAAAAGGACTGAAGCCAAACGGCGCAAGATACGACTACCAATC
ACAATCATCATACTACGTTGCGCCAGCTCCAAAATCCAGGGGCGGCGGTT
CCTCCTTTCACCCTCACCCGTCTGGTCAATCTGCCGCAGCCCTAATCGAT
GCAGATCATGACGACCCATTCATCGCTGCGGGGATGATGGGCCGTGGCAT
GGAAAGCAAAGAGGAGCGCTTCCGCAGACGGCTCGCGGAGAAGCAACGCG
AACGCGACATCGCAGACAAGCTGATCTCCCGTACTGGAGGTGTTGGTGCT
GAATACCTTCGATCTCGAGATAACGACAATGTCCAATCAACCCGTCCCGA
GCAGGCAAAGAACAACTTAGATGCGTTTTCCACCACAAATCTGGGCATCT
CGAACTTCAGGAAAGCAGACAGCGTGAAGTTGAGCCCATTGAAACGCGCT
CATGACGGTGACAGACCCCACGGCAGCGGTGTCAAGAAGACCCGGTTCAT
CACTTCCCATGGCATCAAGGAGGCCGGAAGAGACAGTCTAGGAGGAAAGC
CCGACATGGTGCCGACGAACTATGATGATGACGACGACGATGAACTAGAC
ATCATCTAAATGGCCGAGATCTCGTGGCCACCGAAGTCCCCTCGGGATGC
TCTCTTGAGTACTCCGAATGGTCGCAAGAGGTATGAAGACATGCAGCGAC
GCCGCGAGCACCTGGGTTCGCCTTTGAAACACTCTGTCACTACCCCCGAT
TTACGATCCAAGGCGTCACAACTTCTCAGCGATGGGGTAGACGAGGGCGA
AGATGATGAGGACGAGGAAACACTACAGTTGAAGCTTGCAGCCATTGAGG
CGCGTCTCAAGCTCAAGCAACTTCAGAAAAGTCGCACGAAAACGGGGACA
CCTGGACCGGATAAGCATGGCGGGGAGACTTTCTCTAGACCTGCGTCAGC
AATTGGCTCTTTCCAGGGACAGGATGAGCCGATAGGGACAAGAAACAATG
GCCATGGGACGGATAGCACTGCTCATATTGATGATGTCCAGGTACCGCTG
TCGCCGACGAGACGTGCTGCTCCTCCCACAGACCCTGTGTCCCCGCGGAG
GTATTTGTTAGGCATTGACAAAGGTCTCAGAAGTAGGGATGTGTCGCTGA
AGCGTCCACCCAGCTCACGAGGGGCTAATCCGCCGGCAAGTAGGCCCGGA
ACGCGAGAAGGTTTAGTCTCTCGATCTGGCAGTCTTCTGCAAGCAATAAC
CGTGGGTGGGGAGCGCAGCCGTCCAAAAAGCTTTAGTGAACGTATGGCTG
AGAGCCGGTCGGCCGATGCGTCTCGGAGAGAACGAGCAGCACGAATGGAG
AAAATTCAGGCGAATCGAAGCTCAGCCTTCCAGATCGACAAGGCAGAAGT
GGAGGCCTTCAAAGCAGCTGCCGAGTCAAGGAAGGACGTTCCAGGTTCGC
CAACGAGGAGGCGACGGGCCGAAAGCTTCAGTCGAGAAGATGTCCTCCGG
TCATATAATCTCAAGCCGTCGCTGAAAAGGGGCCGGAGCCAGACCACGTC
TAGCGTACAGAGATCTGATGATGGTGTGGCTGATGCGAAGGAGTCACTGC
CATATTTTCACCGACGGAACCACAAGTCTGAGTCTGAGGTACCTGCCAGC
TCTCAAAATAGTGCAACCGATGATTCTCAAGGCGAGAAAAGTGGGGACTC
CTCGAAGTTTGAAGCCTTCTCTTCATTGCACTTGTCCAACCGCATCTTAC
CCCATTCGTTCTTGTCTCGAACCCTGGAAGACAAGAAAGCTCTCCGAATC
CCTGATCTGCTACGCACAGTGAAGGCGCCTGACTTTGAACTGCCGGAGGA
TATCGACACAGACTACGTTGTGTTCGGTATAGTAGCATCGAAATCAGAGC
CTAGGCAAATAAAGCAACCGGCCAACGCTACTAAGAAGGAAGTCGATCCA
TTCGACGATGGAACGAACAATACCAACCAATACATGGTCATCACTCTGAC
GGATCTGAAGTGGACGATTGATCTCTTCCTATTCGATACTGCCTTCCCAC
GATACTACCGAATCTCCGAAGGGATACTCATTGCCATTCTAAATCCTACA
ATAATGCCACCACCAAAGAACAAGACCGACACCAACAGATTCAGTCTCGC
CATTTCCTCCTCTGATGACAAGATCCTTGAGGTCGGCTATGCGCAAGACA
TTGGATTCTGCAAGGCCGTCAGGAAGGACGGCAAGTCCTGCCACTCTTGG
GTTGATGGCCGGAAGACAGAATTCTGCGACTTCCATGTCGACCTACAGGT
CCGTCGAACACAAGCAGGTCGAATGGGAGTAAACGGCGGCACAGGCATGT
ATGGTCCTGGCGGCCGCTCAGGGTCTCGAACCGGTTTCTACGGCGGTGAC
AAGAAAGGTCGTCCCCAAAAAGGACTGAAGCCAAACGGCGCAAGATACGA
CTACCAATCACAATCATCATACTACGTTGCGCCAGCTCCAAAATCCAGGG
GCGGCGGTTCCTCCTTTCACCCTCACCCGTCTGGTCAATCTGCCGCAGCC
CTAATCGATGCAGATCATGACGACCCATTCATCGCTGCGGGGATGATGGG
CCGTGGCATGGAAAGCAAAGAGGAGCGCTTCCGCAGACGGCTCGCGGAGA
AGCAACGCGAACGCGACATCGCAGACAAGCTGATCTCCCGTACTGGAGGT
GTTGGTGCTGAATACCTTCGATCTCGAGATAACGACAATGTCCAATCAAC
CCGTCCCGAGCAGGCAAAGAACAACTTAGATGCGTTTTCCACCACAAATC
TGGGCATCTCGAACTTCAGGAAAGCAGACAGCGTGAAGTTGAGCCCATTG
AAACGCGCTCATGACGGTGACAGACCCCACGGCAGCGGTGTCAAGAAGAC
CCGGTTCATCACTTCCCATGGCATCAAGGAGGCCGGAAGAGACAGTCTAG
GAGGAAAGCCCGACATGGTGCCGACGAACTATGATGATGACGACGACGAT
GAACTAGACATCATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007381-T1.utr5p1 | KJC3_007381-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007381-T1.utr3p1 | KJC3_007381-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092618UZ |
| DBxref | InterPro:IPR015408 |
| DBxref | PFAM:PF09329 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2293254..2296612 + |
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