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KJC3_007392-T2, KJC3_007392-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007392-T2
Unique NameKJC3_007392-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2329366..2330445+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007392-T2 ID=KJC3_007392-T2|Name=KJC3_007392-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1080bp|location=Sequence derived from alignment at ch5:2329366..2330445+ (Aspergillus niger KJC3)
GTTCGCCTGACGTAAACTGTATGTCCGCCGATGGCATAAACGCAGACTCC
ACCTATCCAAAGGGATATACACATTCAGTTCGACCGGATCCTGTCCATTC
GGACATTGCATAAGAATCACCCAAGGTCCTATCACTAAATTGCGCTTTCG
GCGAGCGATGGTGGTACCGTTCGAAGTAAGTCCCGTCCCGGAGTGATAAC
AAACGCTGATTGATTAGTTACATGGGCGCTCTCCTCTTCAGCTCCGCCAC
TTTCATCCTTCCAGCCATCTACGGCACGCTTGTCAAGATCTGGATGGCGA
ATATTGATGCCTCTCTCGTCGTCACGATTGATGTCTACACGCATATCGGC
ACTGTTGCAGAAGTCATCAATGAAGGCCTGCCGCGCGCAGTATGGTCTAC
AATTGCCGACAAGGGAGCACGATCCCTTGGGGCTCGCTTAGGACTTGCAC
ACTCACTATTGGTGTTCCAAACTTTAATGGGGGTATTACTGAGCATCATG
TTCGTGTGTGCTGCTCGAGAGTTTTTATCTAAATTCGTTCCACATGACGT
CGCAGAAGCAAGTATAACGTACGTCCATATCAGCTCCTTTTCTGCTCTGA
GTTCTGCGGTTGAGGTGGCCGCTTCCAGCGCGACGCGCACTCTGGGTAAA
CCAGACGTTCCACTTGTGATCAACACTGTTAAAGTAGCGGTGAACATTCT
CCTTGACCTTCTACTAACCTCTAAGTTCCATGCCGGTGGATGGCAGCCGA
CAGTCATCATGCAAGCTGGAATTTGTGATATGGTCGCGGCTTGTTCTGGT
CTTCCATACTTCATCATAACTACAAGTCGCAGGGAAAATGCCAAGGCACC
ATCCACCGGTGGTTTTCTCGCCCCGTTCAAACCAGGGTCTGTCACATTCA
TTGATTCTGCAGTTCGTAACACGCTGTACCTTTGGCTCGTGTCTGGTGTT
GTGGCTGATTTGAAGTTACTATTGTTCTCTAGGATGAAGAGCTATAATCA
TCATTACTCTATAGATTGAGATAAAAGCAAGGTTCATTAAGAAGCAACCA
CAGTTGTCTGGCTCGTCTCGATAGAGGTCG
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Coding sequence (CDS) from alignment at ch5:2329366..2330445+

>KJC3_007392-T2 ID=KJC3_007392-T2|Name=KJC3_007392-T2|organism=Aspergillus niger KJC3|type=CDS|length=1410bp|location=Sequence derived from alignment at ch5:2329366..2330445+ (Aspergillus niger KJC3)
ATGGGCGCTCTCCTCTTCAGCTCCGCCACTTTCATCCTTCCAGCCATCTA
CGGCACGCTTGTCAAGATCTGGATGGCGAATATTGATGCCTCTCTCGTCG
TCACGATTGATGTCTACACGCATATCGGCACTGTTGCAGAAGTCATCAAT
GAAGGCCTGCCGCGCGCAGTATGGTCTACAATTGCCGACAAGGGAGCACG
ATCCCTTGGGGCTCGCTTAGGACTTGCACACTCACTATTGGTGTTCCAAA
CTTTAATGGGGGTATTACTGAGCATCATGTTCGTGTGTGCTGCTCGAGAG
TTTTTATCTAAATTCGTTCCACATGACGTCGCAGAAGCAAGTATAACGTA
CGTCCATATCAGCTCCTTTTCTGCTCTGAGTTCTGCGGTTGAGGTGGCCG
CTTCCAGCGCGACGCGCACTCTGGGTAAACCAGACGTTCCACTTGTGATC
AACACTGTTAAAGTAGCGGTGAACATTCTCCTTGACCTTCTACTAACCTC
TAAGTTCCATGCCGGTGGATGGCAGCCGACAGTCATCATGCAAGCTGGAA
TTTGTGATATGGTCGCGGCTTGTTCTGGTCTTCCATACTTCATCATAACT
ACAAGTCGCAGGGAAAATGCCAAGGCACCATCCACCGGTGGTTTTCTCGC
CCCGTTCAAACCAGGGTCTGTCACATTCATTGATTCTGCAGATGAAGAGC
TATAAATGGGCGCTCTCCTCTTCAGCTCCGCCACTTTCATCCTTCCAGCC
ATCTACGGCACGCTTGTCAAGATCTGGATGGCGAATATTGATGCCTCTCT
CGTCGTCACGATTGATGTCTACACGCATATCGGCACTGTTGCAGAAGTCA
TCAATGAAGGCCTGCCGCGCGCAGTATGGTCTACAATTGCCGACAAGGGA
GCACGATCCCTTGGGGCTCGCTTAGGACTTGCACACTCACTATTGGTGTT
CCAAACTTTAATGGGGGTATTACTGAGCATCATGTTCGTGTGTGCTGCTC
GAGAGTTTTTATCTAAATTCGTTCCACATGACGTCGCAGAAGCAAGTATA
ACGTACGTCCATATCAGCTCCTTTTCTGCTCTGAGTTCTGCGGTTGAGGT
GGCCGCTTCCAGCGCGACGCGCACTCTGGGTAAACCAGACGTTCCACTTG
TGATCAACACTGTTAAAGTAGCGGTGAACATTCTCCTTGACCTTCTACTA
ACCTCTAAGTTCCATGCCGGTGGATGGCAGCCGACAGTCATCATGCAAGC
TGGAATTTGTGATATGGTCGCGGCTTGTTCTGGTCTTCCATACTTCATCA
TAACTACAAGTCGCAGGGAAAATGCCAAGGCACCATCCACCGGTGGTTTT
CTCGCCCCGTTCAAACCAGGGTCTGTCACATTCATTGATTCTGCAGATGA
AGAGCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015297antiporter activity
GO:0042910xenobiotic transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007392KJC3_007392Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007392-T2KJC3_007392-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007392-T2.utr5p1KJC3_007392-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_007392-T2.utr5p2KJC3_007392-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007392-T2.exon1KJC3_007392-T2.exon1Aspergillus niger KJC3exon
KJC3_007392-T2.exon2KJC3_007392-T2.exon2Aspergillus niger KJC3exon
KJC3_007392-T2.exon3KJC3_007392-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007392-T2.cdsKJC3_007392-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007392-T2.utr3p1KJC3_007392-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002528
DBxrefPFAM:PF01554
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2329366..2330445 +
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