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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2335628..2337341- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007395-T1 ID=KJC3_007395-T1|Name=KJC3_007395-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1714bp|location=Sequence derived from alignment at ch5:2335628..2337341- (Aspergillus niger KJC3)
GAGGTCCATCTGATTTGGGAAGTGCCGCTCCATCGCCTCCTCATCTTGTG
TCTCTCTCTCCCCTTCTCCTCATTGTCCTTTTTCCTTGGATTCCTCCCCC
AACGCTCCTCCTCGCTAAGAATAACCCCTGATTCCACCCAGTTAGAGCTA
TCGCTCCTGGGAAAGTTGCCCATCATGGTTCGCGAGGAGCTTATCTCCTC
TGCTGTAAGTGTTGCCTTTATCTGTGACTGATATTCTGTTGCCGGAATCG
GAGCTGACCCTCACGCTCGATCGTTTAGGTCACCTGTATGTGCTCAACAC
ATCCATTACCGTGTTGATTCTGTACTCGTCTAATACTTCTGCAGTCCTCC
AAGATCCATCTGTCGCCGCCTCGCCAATTGAGAAGCGAGTCGCATTCCTC
CAGTCAAAGAACCTGACTAAAGAAGAGATCGATGTTGCGCTTGCCCGAGC
AGGTGAAGATCCGTCCACAGCAGCTGCCGCTGTAGCCGCATCATCTGGTT
ACCAATCAGCCCCTCAACAAGTTGTCTACCGACCTCCTCCTCCACCTGCT
GCAGGCTATGGATATCCTCCCTATGGTCAATGGCAGGCTCCGCCGGAGTG
AGTCTCGATTCTTGCCCATTTTAAACTGTATTCTACTAATTCCGCTTCGC
AAGGCCTCCGAAACGGGACTGGCGTGACTGGTTCATTATGGCTACGGTGA
TGGGAGGAGTAGGTTACGGACTCTACACGATCACCAAGGTCGGTGTCTCA
ATACGCACTCTGCTCAATCAAGTAAAAAATGCTGACATGCTTTAAGCGCT
ACATTTCGCCCTTAATCGCACCTCCCACTCCACCCCAGCTAGAACAAGAC
AAAGAACACATTGATGAGCAATTCAATCGCGCATTTGCCCTGATCGAACA
GCTGTCCACAGATACAGCCGCACTGAAGTCGGCGGAGGAGACGCGCACAG
AACGGCTAGATACCGCCCTTCGCGAGGTAGAGAACCTTGTTTCTGACATG
AAGAACGCCTCCCGACGGAGGGACGACGAGACCCGTCGTATCAGCGACGA
AGTCAAGTCGCTGAAGGATGCGATCCCCAAGGCGCTGGAAGGTGCCCGGG
AAGGCAACGAGACACGGTTGAAGGAGCTTGGAGCTGAATTGAAGAGCCTG
AAGGTCTTGCTGGGCAATAGACTTGGTGGCAGCGGCAACAACGCCACCTC
TCCTGCCCCTGGACGGTTCAGCGGTATGAACATCCCAACTGCTTCTCGGC
CTGCGGAGGAATCAACTCCCGCCGCGGCGGCCCCGGTCAATGGTACGCCC
GCTGCGCCAGCATCAACTGAGCAGCCCTCCCAATCGGCACAGCCAACCCC
GAGCCCCAGCACCCCCTCGATGAGCAACAGCCCTCTATCGCAGCTGGGCC
GCTCTGCTTCCATCCCAGCCTGGCAGATGGCTGCTGCCAACCGCTCCAAG
ACCGCTTCTCCCTCGACCCCTTCCACCAGCACCCCGGACAACACAACTGG
CGCGGCTCCTGAGTCGAGCGCCCCGGCCAGCTGAACACTTACCAGATATA
CTTCTCCCAGTGATGTGCATTGTCCCAAGCCATGTAATTAGATGGAGGTT
ATCGAACGAACTTTACGCATGAGATGTCTAGGCGTTTCTGGATGGTGCGG
AGGATGTACAATATGTAGCACGTGAAAGTACCATGTCGCAATAAAGACCA
CCAATAGGTTCCCG back to topCoding sequence (CDS) from alignment at ch5:2335628..2337341- >KJC3_007395-T1 ID=KJC3_007395-T1|Name=KJC3_007395-T1|organism=Aspergillus niger KJC3|type=CDS|length=5565bp|location=Sequence derived from alignment at ch5:2335628..2337341- (Aspergillus niger KJC3)
CGCTACATTTCGCCCTTAATCGCACCTCCCACTCCACCCCAGCTAGAACA
AGACAAAGAACACATTGATGAGCAATTCAATCGCGCATTTGCCCTGATCG
AACAGCTGTCCACAGATACAGCCGCACTGAAGTCGGCGGAGGAGACGCGC
ACAGAACGGCTAGATACCGCCCTTCGCGAGGTAGAGAACCTTGTTTCTGA
CATGAAGAACGCCTCCCGACGGAGGGACGACGAGACCCGTCGTATCAGCG
ACGAAGTCAAGTCGCTGAAGGATGCGATCCCCAAGGCGCTGGAAGGTGCC
CGGGAAGGCAACGAGACACGGTTGAAGGAGCTTGGAGCTGAATTGAAGAG
CCTGAAGGTCTTGCTGGGCAATAGACTTGGTGGCAGCGGCAACAACGCCA
CCTCTCCTGCCCCTGGACGGTTCAGCGGTATGAACATCCCAACTGCTTCT
CGGCCTGCGGAGGAATCAACTCCCGCCGCGGCGGCCCCGGTCAATGGTAC
GCCCGCTGCGCCAGCATCAACTGAGCAGCCCTCCCAATCGGCACAGCCAA
CCCCGAGCCCCAGCACCCCCTCGATGAGCAACAGCCCTCTATCGCAGCTG
GGCCGCTCTGCTTCCATCCCAGCCTGGCAGATGGCTGCTGCCAACCGCTC
CAAGACCGCTTCTCCCTCGACCCCTTCCACCAGCACCCCGGACAACACAA
CTGGCGCGGCTCCTGAGTCGAGCGCCCCGGCCAGCTGAGCCTCCGAAACG
GGACTGGCGTGACTGGTTCATTATGGCTACGGTGATGGGAGGAGTAGGTT
ACGGACTCTACACGATCACCAAGTCCTCCAAGATCCATCTGTCGCCGCCT
CGCCAATTGAGAAGCGAGTCGCATTCCTCCAGTCAAAGAACCTGACTAAA
GAAGAGATCGATGTTGCGCTTGCCCGAGCAGGTGAAGATCCGTCCACAGC
AGCTGCCGCTGTAGCCGCATCATCTGGTTACCAATCAGCCCCTCAACAAG
TTGTCTACCGACCTCCTCCTCCACCTGCTGCAGGCTATGGATATCCTCCC
TATGGTCAATGGCAGGCTCCGCCGGAGTCACCTATGGTTCGCGAGGAGCT
TATCTCCTCTGCTCGCTACATTTCGCCCTTAATCGCACCTCCCACTCCAC
CCCAGCTAGAACAAGACAAAGAACACATTGATGAGCAATTCAATCGCGCA
TTTGCCCTGATCGAACAGCTGTCCACAGATACAGCCGCACTGAAGTCGGC
GGAGGAGACGCGCACAGAACGGCTAGATACCGCCCTTCGCGAGGTAGAGA
ACCTTGTTTCTGACATGAAGAACGCCTCCCGACGGAGGGACGACGAGACC
CGTCGTATCAGCGACGAAGTCAAGTCGCTGAAGGATGCGATCCCCAAGGC
GCTGGAAGGTGCCCGGGAAGGCAACGAGACACGGTTGAAGGAGCTTGGAG
CTGAATTGAAGAGCCTGAAGGTCTTGCTGGGCAATAGACTTGGTGGCAGC
GGCAACAACGCCACCTCTCCTGCCCCTGGACGGTTCAGCGGTATGAACAT
CCCAACTGCTTCTCGGCCTGCGGAGGAATCAACTCCCGCCGCGGCGGCCC
CGGTCAATGGTACGCCCGCTGCGCCAGCATCAACTGAGCAGCCCTCCCAA
TCGGCACAGCCAACCCCGAGCCCCAGCACCCCCTCGATGAGCAACAGCCC
TCTATCGCAGCTGGGCCGCTCTGCTTCCATCCCAGCCTGGCAGATGGCTG
CTGCCAACCGCTCCAAGACCGCTTCTCCCTCGACCCCTTCCACCAGCACC
CCGGACAACACAACTGGCGCGGCTCCTGAGTCGAGCGCCCCGGCCAGCTG
AGCCTCCGAAACGGGACTGGCGTGACTGGTTCATTATGGCTACGGTGATG
GGAGGAGTAGGTTACGGACTCTACACGATCACCAAGTCCTCCAAGATCCA
TCTGTCGCCGCCTCGCCAATTGAGAAGCGAGTCGCATTCCTCCAGTCAAA
GAACCTGACTAAAGAAGAGATCGATGTTGCGCTTGCCCGAGCAGGTGAAG
ATCCGTCCACAGCAGCTGCCGCTGTAGCCGCATCATCTGGTTACCAATCA
GCCCCTCAACAAGTTGTCTACCGACCTCCTCCTCCACCTGCTGCAGGCTA
TGGATATCCTCCCTATGGTCAATGGCAGGCTCCGCCGGAGTCACCTATGG
TTCGCGAGGAGCTTATCTCCTCTGCTCGCTACATTTCGCCCTTAATCGCA
CCTCCCACTCCACCCCAGCTAGAACAAGACAAAGAACACATTGATGAGCA
ATTCAATCGCGCATTTGCCCTGATCGAACAGCTGTCCACAGATACAGCCG
CACTGAAGTCGGCGGAGGAGACGCGCACAGAACGGCTAGATACCGCCCTT
CGCGAGGTAGAGAACCTTGTTTCTGACATGAAGAACGCCTCCCGACGGAG
GGACGACGAGACCCGTCGTATCAGCGACGAAGTCAAGTCGCTGAAGGATG
CGATCCCCAAGGCGCTGGAAGGTGCCCGGGAAGGCAACGAGACACGGTTG
AAGGAGCTTGGAGCTGAATTGAAGAGCCTGAAGGTCTTGCTGGGCAATAG
ACTTGGTGGCAGCGGCAACAACGCCACCTCTCCTGCCCCTGGACGGTTCA
GCGGTATGAACATCCCAACTGCTTCTCGGCCTGCGGAGGAATCAACTCCC
GCCGCGGCGGCCCCGGTCAATGGTACGCCCGCTGCGCCAGCATCAACTGA
GCAGCCCTCCCAATCGGCACAGCCAACCCCGAGCCCCAGCACCCCCTCGA
TGAGCAACAGCCCTCTATCGCAGCTGGGCCGCTCTGCTTCCATCCCAGCC
TGGCAGATGGCTGCTGCCAACCGCTCCAAGACCGCTTCTCCCTCGACCCC
TTCCACCAGCACCCCGGACAACACAACTGGCGCGGCTCCTGAGTCGAGCG
CCCCGGCCAGCTGAGCCTCCGAAACGGGACTGGCGTGACTGGTTCATTAT
GGCTACGGTGATGGGAGGAGTAGGTTACGGACTCTACACGATCACCAAGT
CCTCCAAGATCCATCTGTCGCCGCCTCGCCAATTGAGAAGCGAGTCGCAT
TCCTCCAGTCAAAGAACCTGACTAAAGAAGAGATCGATGTTGCGCTTGCC
CGAGCAGGTGAAGATCCGTCCACAGCAGCTGCCGCTGTAGCCGCATCATC
TGGTTACCAATCAGCCCCTCAACAAGTTGTCTACCGACCTCCTCCTCCAC
CTGCTGCAGGCTATGGATATCCTCCCTATGGTCAATGGCAGGCTCCGCCG
GAGTCACCTATGGTTCGCGAGGAGCTTATCTCCTCTGCTCGCTACATTTC
GCCCTTAATCGCACCTCCCACTCCACCCCAGCTAGAACAAGACAAAGAAC
ACATTGATGAGCAATTCAATCGCGCATTTGCCCTGATCGAACAGCTGTCC
ACAGATACAGCCGCACTGAAGTCGGCGGAGGAGACGCGCACAGAACGGCT
AGATACCGCCCTTCGCGAGGTAGAGAACCTTGTTTCTGACATGAAGAACG
CCTCCCGACGGAGGGACGACGAGACCCGTCGTATCAGCGACGAAGTCAAG
TCGCTGAAGGATGCGATCCCCAAGGCGCTGGAAGGTGCCCGGGAAGGCAA
CGAGACACGGTTGAAGGAGCTTGGAGCTGAATTGAAGAGCCTGAAGGTCT
TGCTGGGCAATAGACTTGGTGGCAGCGGCAACAACGCCACCTCTCCTGCC
CCTGGACGGTTCAGCGGTATGAACATCCCAACTGCTTCTCGGCCTGCGGA
GGAATCAACTCCCGCCGCGGCGGCCCCGGTCAATGGTACGCCCGCTGCGC
CAGCATCAACTGAGCAGCCCTCCCAATCGGCACAGCCAACCCCGAGCCCC
AGCACCCCCTCGATGAGCAACAGCCCTCTATCGCAGCTGGGCCGCTCTGC
TTCCATCCCAGCCTGGCAGATGGCTGCTGCCAACCGCTCCAAGACCGCTT
CTCCCTCGACCCCTTCCACCAGCACCCCGGACAACACAACTGGCGCGGCT
CCTGAGTCGAGCGCCCCGGCCAGCTGAGCCTCCGAAACGGGACTGGCGTG
ACTGGTTCATTATGGCTACGGTGATGGGAGGAGTAGGTTACGGACTCTAC
ACGATCACCAAGTCCTCCAAGATCCATCTGTCGCCGCCTCGCCAATTGAG
AAGCGAGTCGCATTCCTCCAGTCAAAGAACCTGACTAAAGAAGAGATCGA
TGTTGCGCTTGCCCGAGCAGGTGAAGATCCGTCCACAGCAGCTGCCGCTG
TAGCCGCATCATCTGGTTACCAATCAGCCCCTCAACAAGTTGTCTACCGA
CCTCCTCCTCCACCTGCTGCAGGCTATGGATATCCTCCCTATGGTCAATG
GCAGGCTCCGCCGGAGTCACCTATGGTTCGCGAGGAGCTTATCTCCTCTG
CTCGCTACATTTCGCCCTTAATCGCACCTCCCACTCCACCCCAGCTAGAA
CAAGACAAAGAACACATTGATGAGCAATTCAATCGCGCATTTGCCCTGAT
CGAACAGCTGTCCACAGATACAGCCGCACTGAAGTCGGCGGAGGAGACGC
GCACAGAACGGCTAGATACCGCCCTTCGCGAGGTAGAGAACCTTGTTTCT
GACATGAAGAACGCCTCCCGACGGAGGGACGACGAGACCCGTCGTATCAG
CGACGAAGTCAAGTCGCTGAAGGATGCGATCCCCAAGGCGCTGGAAGGTG
CCCGGGAAGGCAACGAGACACGGTTGAAGGAGCTTGGAGCTGAATTGAAG
AGCCTGAAGGTCTTGCTGGGCAATAGACTTGGTGGCAGCGGCAACAACGC
CACCTCTCCTGCCCCTGGACGGTTCAGCGGTATGAACATCCCAACTGCTT
CTCGGCCTGCGGAGGAATCAACTCCCGCCGCGGCGGCCCCGGTCAATGGT
ACGCCCGCTGCGCCAGCATCAACTGAGCAGCCCTCCCAATCGGCACAGCC
AACCCCGAGCCCCAGCACCCCCTCGATGAGCAACAGCCCTCTATCGCAGC
TGGGCCGCTCTGCTTCCATCCCAGCCTGGCAGATGGCTGCTGCCAACCGC
TCCAAGACCGCTTCTCCCTCGACCCCTTCCACCAGCACCCCGGACAACAC
AACTGGCGCGGCTCCTGAGTCGAGCGCCCCGGCCAGCTGAGCCTCCGAAA
CGGGACTGGCGTGACTGGTTCATTATGGCTACGGTGATGGGAGGAGTAGG
TTACGGACTCTACACGATCACCAAGTCCTCCAAGATCCATCTGTCGCCGC
CTCGCCAATTGAGAAGCGAGTCGCATTCCTCCAGTCAAAGAACCTGACTA
AAGAAGAGATCGATGTTGCGCTTGCCCGAGCAGGTGAAGATCCGTCCACA
GCAGCTGCCGCTGTAGCCGCATCATCTGGTTACCAATCAGCCCCTCAACA
AGTTGTCTACCGACCTCCTCCTCCACCTGCTGCAGGCTATGGATATCCTC
CCTATGGTCAATGGCAGGCTCCGCCGGAGTCACCTATGGTTCGCGAGGAG
CTTATCTCCTCTGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007395-T1.utr3p1 | KJC3_007395-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007395-T1.utr5p1 | KJC3_007395-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092643S6 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR006785 |
| DBxref | PFAM:PF04695 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2335628..2337341 - |
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