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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2340714..2343963- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007397-T1 ID=KJC3_007397-T1|Name=KJC3_007397-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3250bp|location=Sequence derived from alignment at ch5:2340714..2343963- (Aspergillus niger KJC3)
CTTCCCTCCAACAGCTGCCTCCCCCAGTCGCTGGTTATCGCCAGGCACAC
GCCTTGTCCGCTCAAATTGAGGAATGCCGACCCGTCTCAACGATTAGACA
TGCGCCACAGAACGTCCGTCCGACGGTCACATCGAGATTTGGATTTCCTC
CGCCCGCAGGTCTCCTCCGCTACCTCCGTCGTGTCATGAAAAGGTGCCTG
AGTCCAGCTCGTCTGCCGTGCCTGGACCGCGGGTCTTCCTTCGTCCTCCA
CCCTTCGATCCTCCGTCGTCTCGCCCCCCGTCACATCGCGCTCACCAGCC
GGGGGCCTTTCCCCGATAGGCGACGACAATGGAGTCGCCAGTTCTCCGTT
GGGGCCGGTCCTCCGATCAATCGCCAATTGCTGCAAGACTATGTTAGGGT
GGAAATGAAGAGATGTCCTGTTGCAGGACCAGATCAGAGTAACCCGGAGG
CTTGGATTGCGCGGCTGGACCAGTACCTGCCGCCTTCGTTGCGGAGAGAC
AGCGACGGTCATACAAACAATGACGATGTTCCGGATGATGCAGCAATTCG
GACCGATGCGGCTTATTTTGCGCAGACGATTGAATTGGCTAATTTACTGC
TGCATGCGCGGGATTCTGGGAAGATTGATTTGCTTGCGTATGTTGGTTTC
CGGTTGAATAATTGGCCCGCTGTGCAGTTCTTGATAAATCGCCTGCTTGA
TGCGGCGGACTCTCTTAAGGAGGTCACGCTTCCTTCCCGGCCTTTGTCTA
GCTATGACTGGGGTCTGGGGCTGGGGCTCTCGCTGGATGAGCTTACGGAT
AGGTCTGAGCCGCAGGCTCCGAAAATCCCGCAGGCTTCGAACGGGCTGAC
GGCGTCGGATATGACGAGCTTGGATGCTTTTACAGAGCGGCCGTATGCTG
ATGACCATTCGAAACGATTTATGGCTGAGGTGTGGCAGAGTTTGGGGTCT
ATTGTGCTGGATGCGGCTGATGCCTCGCCTAACGAGGCGAAGCTGGCTAT
GTCTCATGTGTTCCAGGTTCTAGCTCGACTGCACCACTCTGATGCCATCT
CCGATAGGGTATACAAGTATGTCCCGCCGGACAGCTACCAAGCTACATTC
CGACCTCCGGGTATGCATCTGCTTTCTTCTCATATTATGAGTGTCCTGTC
CGACGCCGCGTGGCTGGTTCATGAAGCGGAGGTTGCTGCTAAAGCGGCTG
CTGCCGGCGAGGATTCGCCTTATCTTCCATTCAAAATGGGAGTTCGTGAG
CTTGGGCCCGAGGTTTGGCTGGAGTTTATCCTCTGGTGCTGTGTGGAACA
TGGCCACATCGAGGAGGGAGTATGGCTCATTGATCGAATGACAAGCAAGA
CAGGAGACCAGGCCTGGAAATTCCAGAGCTGGAAGCCCCTACTCGATGAC
TCCGGGTCGGTCTGGCAGACCAAAGTCGATCAGGAAGAGACTTGGCGACA
ACCCGGCCACCAGGAACGCTCTACGATGCTGCGAAAGCGGCATAGCCCGA
CGCCCTTCCACGGACTGGGAAAGCGAACCATGAGCACTGAAGTGGCCGCG
GCCTTGCTGGATAGCCTTCCCAACCAGGTATATCTAGGTCTCGGTTTCAG
AGGTATGTCGCCGAGCGCCCTCTTACGCTATGCATCCAGTCTCAAGTTCG
CAATTGCCCCGTCAACGGACGACGGGAAATTATTGCCTACGCGCAGAACG
TCGAACTGGTTCGCTGTGCGAGTTATGGAATCGGGAGGCCTCAAGCCGGA
AGCCGACCCCCGGACATTCGAAGACTTCCTCAGGATCACGCCGTGCGTCG
TTCCGCCCTGGGACACCGACCTTTACCACGTCAATGAAGATGCTTTGACC
CGAATGAGTCGGTCACAGCTGTACGACGACACTGCCGCCTTGGTCGGCCT
GATCGAGTACAACATCCGGTTTTACTCGTCGGAGCGCTTCTGCGGTGACG
CTCTGAACGCATTCTCCTGGCTGCAAGCCATCGTTGACAGCAGCAAGATG
CAGCGCATCGACGAGTTCTTCTCTTCGCGCGTCGACCGACCTGGCGTCGT
TCTCCCTACCCCTGAACTTGATGATCTGGACTCCACGGAACCCTTCGAAT
CATCCATGCCGCAATTGTCCAGCGTCACCTTGGCCGAGCTCATTGATCTA
GTCACCGTATCGCGCGCATTCACATTCGGCAACTGGCTCTTCTACTCCGA
CGATATCGACGGCCCCCCAGTCTCGCCCCGCGCCTACGGCGACCAAGCCC
TAGCACCATCCATCATCCGCTACGCCACAGCCACCAGGAACGCCGCCCTC
TGCGACGCCGTCGTCCAGTCCCTCTCCCAACCCCTCTCCTCCAACACCCT
CCGCGCACTCCTCAACTCCCGCATCGCCCTGCACCAATGGGACGCGGTCA
CCAAACTCTTCGAATACCTCCGCGACTACCGCGCCAAATCCTGGGGCCAG
AGCAACGCCACCGCCCTCGCCGCGGAGATCATCCGTCTCGAGCACACCAT
CTACCGGCAACAACCACCCCCAGACCCCTCAACCCTACAAGAAACCACCA
CCTCCCTCACCCGCGCCAAGGAGCTCCTCTCCCGCCTCCTCAAGGGCACC
TACAACGAACCCAACCACATCGCCACCTCCCGCTTCCAAGAACGCGCCAT
CTCCGGCCTCTACAACATCTTCCTCTCTATCCCAGGCACCCTCCACGACC
TCGCTGCCTCCATCACCAACTCCTCTAACAGCAACAAATTCTCCACCCCC
CGCAACGCCATCCCCTATATCCCGGCAACAGCCTTCCACACCCTCCTCTC
CGCCATCGTCGACACCCGCGGCAGTGCCGCCGGCCAACGCTTCTACGACA
AATGGTGTCTCGACACGAAGTCCCCGACATCACGCCGTCTCCAAGAAGGT
GGCATCGTCCGATTCTATCTCGGCAAGGAACGGAACCTCGCGAAGGGCGA
TCCGCACTTCGATGCCAGATACTTCAAGCGCGCGAGGGAGAAAGCCACGA
TGCCGAATCCCACGACTGTGAGGATTATTGCGCAGGCTGCTGTAGCGGAG
TTTCATGAACATGAAGCTGAGGGTAAGGGAGCTGTGAACCCGGCTGAAGA
TGTGTTGAGTTTCTGTATCAAGAGGTTTGAGGCCTTTGGGATGCGGAGAC
GCGAGATCAATCGCGAGGTTGGAGGGATACTGTATAGGAGACGGAGGGAG
GGGGACAAGTTGAGGAGGGAGATGAAGAAGGAGAAGGTGAGGGGGTAGAT
back to topCoding sequence (CDS) from alignment at ch5:2340714..2343963- >KJC3_007397-T1 ID=KJC3_007397-T1|Name=KJC3_007397-T1|organism=Aspergillus niger KJC3|type=CDS|length=3063bp|location=Sequence derived from alignment at ch5:2340714..2343963- (Aspergillus niger KJC3)
ATGAAAAGGTGCCTGAGTCCAGCTCGTCTGCCGTGCCTGGACCGCGGGTC
TTCCTTCGTCCTCCACCCTTCGATCCTCCGTCGTCTCGCCCCCCGTCACA
TCGCGCTCACCAGCCGGGGGCCTTTCCCCGATAGGCGACGACAATGGAGT
CGCCAGTTCTCCGTTGGGGCCGGTCCTCCGATCAATCGCCAATTGCTGCA
AGACTATGTTAGGGTGGAAATGAAGAGATGTCCTGTTGCAGGACCAGATC
AGAGTAACCCGGAGGCTTGGATTGCGCGGCTGGACCAGTACCTGCCGCCT
TCGTTGCGGAGAGACAGCGACGGTCATACAAACAATGACGATGTTCCGGA
TGATGCAGCAATTCGGACCGATGCGGCTTATTTTGCGCAGACGATTGAAT
TGGCTAATTTACTGCTGCATGCGCGGGATTCTGGGAAGATTGATTTGCTT
GCGTATGTTGGTTTCCGGTTGAATAATTGGCCCGCTGTGCAGTTCTTGAT
AAATCGCCTGCTTGATGCGGCGGACTCTCTTAAGGAGGTCACGCTTCCTT
CCCGGCCTTTGTCTAGCTATGACTGGGGTCTGGGGCTGGGGCTCTCGCTG
GATGAGCTTACGGATAGGTCTGAGCCGCAGGCTCCGAAAATCCCGCAGGC
TTCGAACGGGCTGACGGCGTCGGATATGACGAGCTTGGATGCTTTTACAG
AGCGGCCGTATGCTGATGACCATTCGAAACGATTTATGGCTGAGGTGTGG
CAGAGTTTGGGGTCTATTGTGCTGGATGCGGCTGATGCCTCGCCTAACGA
GGCGAAGCTGGCTATGTCTCATGTGTTCCAGGTTCTAGCTCGACTGCACC
ACTCTGATGCCATCTCCGATAGGGTATACAAGTATGTCCCGCCGGACAGC
TACCAAGCTACATTCCGACCTCCGGGTATGCATCTGCTTTCTTCTCATAT
TATGAGTGTCCTGTCCGACGCCGCGTGGCTGGTTCATGAAGCGGAGGTTG
CTGCTAAAGCGGCTGCTGCCGGCGAGGATTCGCCTTATCTTCCATTCAAA
ATGGGAGTTCGTGAGCTTGGGCCCGAGGTTTGGCTGGAGTTTATCCTCTG
GTGCTGTGTGGAACATGGCCACATCGAGGAGGGAGTATGGCTCATTGATC
GAATGACAAGCAAGACAGGAGACCAGGCCTGGAAATTCCAGAGCTGGAAG
CCCCTACTCGATGACTCCGGGTCGGTCTGGCAGACCAAAGTCGATCAGGA
AGAGACTTGGCGACAACCCGGCCACCAGGAACGCTCTACGATGCTGCGAA
AGCGGCATAGCCCGACGCCCTTCCACGGACTGGGAAAGCGAACCATGAGC
ACTGAAGTGGCCGCGGCCTTGCTGGATAGCCTTCCCAACCAGGTATATCT
AGGTCTCGGTTTCAGAGGTATGTCGCCGAGCGCCCTCTTACGCTATGCAT
CCAGTCTCAAGTTCGCAATTGCCCCGTCAACGGACGACGGGAAATTATTG
CCTACGCGCAGAACGTCGAACTGGTTCGCTGTGCGAGTTATGGAATCGGG
AGGCCTCAAGCCGGAAGCCGACCCCCGGACATTCGAAGACTTCCTCAGGA
TCACGCCGTGCGTCGTTCCGCCCTGGGACACCGACCTTTACCACGTCAAT
GAAGATGCTTTGACCCGAATGAGTCGGTCACAGCTGTACGACGACACTGC
CGCCTTGGTCGGCCTGATCGAGTACAACATCCGGTTTTACTCGTCGGAGC
GCTTCTGCGGTGACGCTCTGAACGCATTCTCCTGGCTGCAAGCCATCGTT
GACAGCAGCAAGATGCAGCGCATCGACGAGTTCTTCTCTTCGCGCGTCGA
CCGACCTGGCGTCGTTCTCCCTACCCCTGAACTTGATGATCTGGACTCCA
CGGAACCCTTCGAATCATCCATGCCGCAATTGTCCAGCGTCACCTTGGCC
GAGCTCATTGATCTAGTCACCGTATCGCGCGCATTCACATTCGGCAACTG
GCTCTTCTACTCCGACGATATCGACGGCCCCCCAGTCTCGCCCCGCGCCT
ACGGCGACCAAGCCCTAGCACCATCCATCATCCGCTACGCCACAGCCACC
AGGAACGCCGCCCTCTGCGACGCCGTCGTCCAGTCCCTCTCCCAACCCCT
CTCCTCCAACACCCTCCGCGCACTCCTCAACTCCCGCATCGCCCTGCACC
AATGGGACGCGGTCACCAAACTCTTCGAATACCTCCGCGACTACCGCGCC
AAATCCTGGGGCCAGAGCAACGCCACCGCCCTCGCCGCGGAGATCATCCG
TCTCGAGCACACCATCTACCGGCAACAACCACCCCCAGACCCCTCAACCC
TACAAGAAACCACCACCTCCCTCACCCGCGCCAAGGAGCTCCTCTCCCGC
CTCCTCAAGGGCACCTACAACGAACCCAACCACATCGCCACCTCCCGCTT
CCAAGAACGCGCCATCTCCGGCCTCTACAACATCTTCCTCTCTATCCCAG
GCACCCTCCACGACCTCGCTGCCTCCATCACCAACTCCTCTAACAGCAAC
AAATTCTCCACCCCCCGCAACGCCATCCCCTATATCCCGGCAACAGCCTT
CCACACCCTCCTCTCCGCCATCGTCGACACCCGCGGCAGTGCCGCCGGCC
AACGCTTCTACGACAAATGGTGTCTCGACACGAAGTCCCCGACATCACGC
CGTCTCCAAGAAGGTGGCATCGTCCGATTCTATCTCGGCAAGGAACGGAA
CCTCGCGAAGGGCGATCCGCACTTCGATGCCAGATACTTCAAGCGCGCGA
GGGAGAAAGCCACGATGCCGAATCCCACGACTGTGAGGATTATTGCGCAG
GCTGCTGTAGCGGAGTTTCATGAACATGAAGCTGAGGGTAAGGGAGCTGT
GAACCCGGCTGAAGATGTGTTGAGTTTCTGTATCAAGAGGTTTGAGGCCT
TTGGGATGCGGAGACGCGAGATCAATCGCGAGGTTGGAGGGATACTGTAT
AGGAGACGGAGGGAGGGGGACAAGTTGAGGAGGGAGATGAAGAAGGAGAA
GGTGAGGGGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007397-T1.utr3p1 | KJC3_007397-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007397-T1.utr5p1 | KJC3_007397-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch5 | supercontig | ch5:2340714..2343963 - |
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