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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2424478..2426503+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007423-T1 ID=KJC3_007423-T1|Name=KJC3_007423-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2026bp|location=Sequence derived from alignment at ch5:2424478..2426503+ (Aspergillus niger KJC3)
GGCCGTCACTCTCATCGGCGGAGACACCCATAGTACCACTAAGCTCAAAC
AGGCAAGGACGCCTTCCCTAACCGGCCCAAGCTTCAGGGACTCCGCAGTA
AAGTGGATCCCAGATTGCAGTATCCCGCCGGCCCCAACCAATCAGAGGCC
CACGTGCCGCATTCGCGCACCCCCGCGACTGCAGATGACTGCGAAGCCAT
CAGGCACGTTGTCGGTCAGCTTCTCTCCATAGGCAGATGATAAGCCTGGC
TGGCTATCACCGGAGCACGAGATGCATCCTGGAGGGGGTCGCTTCAAGGC
GCTTTTCCCGTCCTTTTTCTTGTCGCTCTTCCTCGGTGCATGCAGCTCAT
TCATATGTAGTACCCGACGCTCCCGTAGACCGACTGAATAATTATAATCA
CTAAAAACTTTCCTGAGCCTGAGATCATGCTGATGTTGCTACTGTGATTT
GCTCGTCGCCCTCCATAGGTCAATTGCTGCTCCGATCCAGCTGTTCTGAA
ATCTACTACTTCTTCAATCCAGCAATCGTCCTCTTCAGCAGAAATCTCCC
GATTTTCCGGCTAGTCTTCCTGCTGCTTATTTAGTCTGGTTGCCACTGTG
AGACCTGCCAGCCCAGCAGCGAAGTTTTCTCCTCCATCTTTCCCCTCAAA
CTTGGTTGAAACAGTATCCCAATTCCCGTCAAAATGTCGATCTCTTCTCT
TCGAGGCCTTCTTACCAACTACTCCCCCGTTTCAGAGGAATTCACCCAAC
CCGATCTGGAAAAGGAGTTGCACGTTTCCCTTCGAAATGGCGACGACAGC
GAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAAAAAGCGGAGAAGAAGGA
GTCCAAAATCGTTGACGGACGTATCGTCTCCGACGCTATCATCGGTCTCT
CCGACGGCATGACGGTTCCATTTGCCCTGACCGCAGGCTTATCTGCTCTG
GGAGACACCAAGGTCGTGGTTTTTGGCGGCATGGCCGAACTCATTGCAGG
AGCCATCTCCATGGGATTGGGAGGCTACTTGGGTGCGAAGAGCGAAGAGT
GAGTAGTTTTCAAACTTCCCCAAGTATACAAAATTAGCAAAAGAAATATG
CTGACCAGTTTTAGGGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGCA
AGAGATTCTAACCGACCCCGCATCGGTGACTGAGACGATCTCGGATGTCT
TTGCGCCCTATGACCTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACAC
CTCTCCTCATCCCCTAACCTCCCCTCCTTCCTCATGAACTTCCATCACAC
CGTCCAGGAACCCTCTGGCTCTCGTGCCTTCATCTGTGCCTTGACCATTG
CATTGGGATACTTCATCGGTGGCTTCGTGCCACTCCTCCCCTACTTCTTC
GTTGGGCCCCATGATGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGAT
GGCCGTTGCTTTGTTCTTGTTCGGTTACGGCAAGACGTGCTTCGTCAGCG
GATGGAAAGGATATCGGAACATCAGACGCGGTGTCATTGGCGGCTTGCAG
ATGGTTCTAGTCGGAGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGAA
GGGGTTCCAAATGCTGGCTGACTCTCATAGTCATGAGCATTAGCCGAGCA
TGGGAGGCAGTTCGATTTAAAAGATTGATTCTTATGGATGGCGTTTCTGG
CGGGACGACAAGAGCTCAAACTGGTAACATCTTCGGCGTTGTTGGGTCAT
TGATTTGGAACATGTACATAGACCTAGTAAATCACAGGTTGAGTTTAGTT
AAGCTGGTAGCATATCGAATATTCTGAATACAACATTACCCCACAAAATC
ACTGGAGCAAATCCTCCTAGAGTAATTAGCCCTGCAAACGTTGTCCCAAA
ACCCTTAAGGCATCCACCAACCATGCACGACAACCTCAGGCAAGCACTTC
TCCTCCCTCTAACCTGGGGCAACACAAACCCCGGGCAGCCATCACCACAT
CTCTTGCTACTAGTTCATGCTCAATC back to topCoding sequence (CDS) from alignment at ch5:2424478..2426503+ >KJC3_007423-T1 ID=KJC3_007423-T1|Name=KJC3_007423-T1|organism=Aspergillus niger KJC3|type=CDS|length=1788bp|location=Sequence derived from alignment at ch5:2424478..2426503+ (Aspergillus niger KJC3)
ATGTCGATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTC
AGAGGAATTCACCCAACCCGATCTGGAAAAGGAGTTGCACGTTTCCCTTC
GAAATGGCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAA
AAAGCGGAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGA
CGCTATCATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCG
CAGGCTTATCTGCTCTGGGAGACACCAAGGTCGTGGTTTTTGGCGGCATG
GCCGAACTCATTGCAGGAGCCATCTCCATGGGATTGGGAGGCTACTTGGG
TGCGAAGAGCGAAGAGGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGC
AAGAGATTCTAACCGACCCCGCATCGGTGACTGAGACGATCTCGGATGTC
TTTGCGCCCTATGACCTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACA
CCTCTCCTCATCCCCTAACCTCCCCTCCTTCCTCATGAACTTCCATCACA
CCGTCCAGGAACCCTCTGGCTCTCGTGCCTTCATCTGTGCCTTGACCATT
GCATTGGGATACTTCATCGGTGGCTTCGTGCCACTCCTCCCCTACTTCTT
CGTTGGGCCCCATGATGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGA
TGGCCGTTGCTTTGTTCTTGTTCGGTTACGGCAAGACGTGCTTCGTCAGC
GGATGGAAAGGATATCGGAACATCAGACGCGGTGTCATTGGCGGCTTGCA
GATGGTTCTAGTCGGAGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGA
AGGGGTTCCAAATGCTGGCTGACTCTCATAGTCATGAGCATTAGATGTCG
ATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTCAGAGGA
ATTCACCCAACCCGATCTGGAAAAGGAGTTGCACGTTTCCCTTCGAAATG
GCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAAAAAGCG
GAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGACGCTAT
CATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCGCAGGCT
TATCTGCTCTGGGAGACACCAAGGTCGTGGTTTTTGGCGGCATGGCCGAA
CTCATTGCAGGAGCCATCTCCATGGGATTGGGAGGCTACTTGGGTGCGAA
GAGCGAAGAGGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGCAAGAGA
TTCTAACCGACCCCGCATCGGTGACTGAGACGATCTCGGATGTCTTTGCG
CCCTATGACCTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACACCTCTC
CTCATCCCCTAACCTCCCCTCCTTCCTCATGAACTTCCATCACACCGTCC
AGGAACCCTCTGGCTCTCGTGCCTTCATCTGTGCCTTGACCATTGCATTG
GGATACTTCATCGGTGGCTTCGTGCCACTCCTCCCCTACTTCTTCGTTGG
GCCCCATGATGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGATGGCCG
TTGCTTTGTTCTTGTTCGGTTACGGCAAGACGTGCTTCGTCAGCGGATGG
AAAGGATATCGGAACATCAGACGCGGTGTCATTGGCGGCTTGCAGATGGT
TCTAGTCGGAGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGAAGGGGT
TCCAAATGCTGGCTGACTCTCATAGTCATGAGCATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005384 | manganese ion transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030026 | cellular manganese ion homeostasis |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007423-T1.utr5p1 | KJC3_007423-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007423-T1.utr3p1 | KJC3_007423-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008217 |
| DBxref | PFAM:PF01988 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2424478..2426503 + |
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