|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2483617..2485044- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007443-T1 ID=KJC3_007443-T1|Name=KJC3_007443-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1428bp|location=Sequence derived from alignment at ch5:2483617..2485044- (Aspergillus niger KJC3)
ATGGCGGACGGTGAACCCTCATACATAGACTACGAGGCCTTCCTAGACCC
GGAATTCTCACCCGCCTCGTTTGCCAATACCTTGGTTGTAGCCACCAACA
ATGCAACAGACACACCGCTGGACCTTTCAACCCCGCTTTCACGGGTGTTA
TTCGATCTTCAGGAGATCGACACCCACATTCATGCGCTGACCACTAAGTC
TGCCCTCCCCCTACTGACGCACACGCGCGACCAGACCGCCGCAGCGGGCC
GTATCCTCAAAGAAGCCGAAGAGCAGATTGCTTCGGTAACGCAGGGATAT
GAGCGGCTGGAAAGGGAAGTTCTCCGCAAATGGGAAGCTGCCGACGAGGC
CAGGGTGGCTGCAGAGAAGTCGTTGGCCACTGTACGACTCGCACGAGCGG
TTGCACGCTGTCTTTCACTAGGCAGACAGCTGGAGAGCCAGCTCGCAGAG
ATCGGGGGCCTTGATGCCACGGCGCCTGCAAAGGATGACTACCGGACGCT
GGAACGGGCCGCCTCCACGATTGTAAGTCTACGTCGAATGTTCTCTGAGA
CGGCAGTAGGCGAGGAAGGCCATGGACTAGACCGCGTCAAGGTCATCCGA
ACACTGCGCAGTGAGCTTGTCATCCCCGCCGAGAACATGGTCAAGACGAG
AGCACAGCAAGCCATCGGCCGATTTACCATGTCGACTATTGCAAGCGCAG
GCTCCGGCTCCCAGTCACAAATGAGCTACAAACAGGCGCGCGATGCCAGA
GCACGCCTCGTCTCTGCCGTCAACATCTTGTATCTATTATCGCCGGTCCC
CAAGAATGTCACCTCCGCAGCAACCTTCCAGCCAGACTTGCTCCTCTCAA
CCCTGCAAGGATACATGCAAACGGCTATCTCCTCGTCCCTGAGTAACCTC
ACCCGGGCGCTGTCTATGTTGCCCACTCTCGAGCGCACTCTCTCCGACCT
GTCTGCACGCTGCCAGGATATTTTTGCCCTGGAAGCTATTCTCAGCAACC
TGCGACCACCGTCGCATCCACTCTTCCCTCCAACAGCACCTGCAGCTGCA
GCTGGCACCCGCAACGGGGAACAGCCGGAACCGCAAGCCCAAGCCACCGG
CAAGAACAACCTGTTGCAACCGCTCCTCAACGCTCTCGACACGTCTTCCC
TCCCATCCTACTTCTGGCGATCACTCGCATCGTACCTCGCGGCTCGTGTG
CAGGAAATTATCAACCGCGGTGGCGTCTCCGCCCGGACACTGCGCTCCAA
CCGGGACCGTATCAAGAGGGAAGTCAAGGACTGCGTTCTGCGGGGCTCGC
AGCTCCCCTCGTCAATTCTCGGGACTGAGAAGCGACTGGGGGTCGACTCA
GGATTGGAGAGGAGCTGGGAACGGGAAGCAGCCGTTATGGTCAGTTCTAT
TGCCAATGTACTGGATAGACAGGCGTGA back to topCoding sequence (CDS) from alignment at ch5:2483617..2485044- >KJC3_007443-T1 ID=KJC3_007443-T1|Name=KJC3_007443-T1|organism=Aspergillus niger KJC3|type=CDS|length=1428bp|location=Sequence derived from alignment at ch5:2483617..2485044- (Aspergillus niger KJC3)
ATGGCGGACGGTGAACCCTCATACATAGACTACGAGGCCTTCCTAGACCC
GGAATTCTCACCCGCCTCGTTTGCCAATACCTTGGTTGTAGCCACCAACA
ATGCAACAGACACACCGCTGGACCTTTCAACCCCGCTTTCACGGGTGTTA
TTCGATCTTCAGGAGATCGACACCCACATTCATGCGCTGACCACTAAGTC
TGCCCTCCCCCTACTGACGCACACGCGCGACCAGACCGCCGCAGCGGGCC
GTATCCTCAAAGAAGCCGAAGAGCAGATTGCTTCGGTAACGCAGGGATAT
GAGCGGCTGGAAAGGGAAGTTCTCCGCAAATGGGAAGCTGCCGACGAGGC
CAGGGTGGCTGCAGAGAAGTCGTTGGCCACTGTACGACTCGCACGAGCGG
TTGCACGCTGTCTTTCACTAGGCAGACAGCTGGAGAGCCAGCTCGCAGAG
ATCGGGGGCCTTGATGCCACGGCGCCTGCAAAGGATGACTACCGGACGCT
GGAACGGGCCGCCTCCACGATTGTAAGTCTACGTCGAATGTTCTCTGAGA
CGGCAGTAGGCGAGGAAGGCCATGGACTAGACCGCGTCAAGGTCATCCGA
ACACTGCGCAGTGAGCTTGTCATCCCCGCCGAGAACATGGTCAAGACGAG
AGCACAGCAAGCCATCGGCCGATTTACCATGTCGACTATTGCAAGCGCAG
GCTCCGGCTCCCAGTCACAAATGAGCTACAAACAGGCGCGCGATGCCAGA
GCACGCCTCGTCTCTGCCGTCAACATCTTGTATCTATTATCGCCGGTCCC
CAAGAATGTCACCTCCGCAGCAACCTTCCAGCCAGACTTGCTCCTCTCAA
CCCTGCAAGGATACATGCAAACGGCTATCTCCTCGTCCCTGAGTAACCTC
ACCCGGGCGCTGTCTATGTTGCCCACTCTCGAGCGCACTCTCTCCGACCT
GTCTGCACGCTGCCAGGATATTTTTGCCCTGGAAGCTATTCTCAGCAACC
TGCGACCACCGTCGCATCCACTCTTCCCTCCAACAGCACCTGCAGCTGCA
GCTGGCACCCGCAACGGGGAACAGCCGGAACCGCAAGCCCAAGCCACCGG
CAAGAACAACCTGTTGCAACCGCTCCTCAACGCTCTCGACACGTCTTCCC
TCCCATCCTACTTCTGGCGATCACTCGCATCGTACCTCGCGGCTCGTGTG
CAGGAAATTATCAACCGCGGTGGCGTCTCCGCCCGGACACTGCGCTCCAA
CCGGGACCGTATCAAGAGGGAAGTCAAGGACTGCGTTCTGCGGGGCTCGC
AGCTCCCCTCGTCAATTCTCGGGACTGAGAAGCGACTGGGGGTCGACTCA
GGATTGGAGAGGAGCTGGGAACGGGAAGCAGCCGTTATGGTCAGTTCTAT
TGCCAATGTACTGGATAGACAGGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0017119 | Golgi transport complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006891 | intra-Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019465 |
| DBxref | PFAM:PF10392 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2483617..2485044 - |
|
