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KJC3_007452-T1, KJC3_007452-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007452-T1
Unique NameKJC3_007452-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2502903..2504331+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007452-T1 ID=KJC3_007452-T1|Name=KJC3_007452-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1429bp|location=Sequence derived from alignment at ch5:2502903..2504331+ (Aspergillus niger KJC3)
GGGTCTTTCACTTTGCGATTGCTGCCTCGTGGAAAGTGCTTGTTGATGCT
TTATGGGACAAAGAAGCCATCAACAAAGGCACAGAGGCATACTTTGCGTC
TATTCTATTTTTGTTGAATCAGTTACTTCAATCGATATAGGTGAAAGGAA
GCTCATTCGAAACCTAGCGTGAATGAATCCCTTCGACAATGCAAGTTGTC
CCCGATATATTTGACTACATCGCTCTGGACGGAGTGCCCAGGCTGACCAT
TTCTTTTTTCAAGTCATCCTGAGCTTACAACCATTTGGTATCGCATCCCG
AGAAATTTTGTATTACGAGGTGTACTTCCAGTGTGTACTCGAGCATATAC
TTTTGTCCAAGCTATCCATATCCGCCACTCATCAACTCAACAAGCAATGT
CTGGAGAACCCGGCAAGCGGCCCAAGGCTGCGTCGCGAAAGACTTCCCTT
GACTCGAACCCACCAGGGGACCAACATGTTGAGTTTGTCAATGCGGAAAA
TGAAACCCCGTCAAGTGGTGTTGGGAGGCTTTCGGCAGGACGGGGAGCCA
TCTTGGCCAATGCTGCCAGAGAGTTGCAGGATGTCGCTGCTAGGCAATCA
GTTGGCCATACGAGCAACAGGCCCCAACCACCACATCTGGGGACGCGAAG
ATCTCGACAATATGAAGAACCAGCCGTCCCGCAAACGTGGGCAATAGGAT
CTAAGGGCAAGCAGCATCATCGACAAATGCCCGCTCCTAAGATGGTAGCA
CCGACTCAATCTGGCACAGGTGATGGCTATACTTATAGTTCATATAAGCG
GCCGCCTTTATTCACGCAGGCCCCCAAGAATAAGGTCCATCGGCCAAAGT
CCCCTACTGACGGGCACAGTCAATTCCTAACAAGAACGTTGGATATGTTC
AACAGCCGTAACGAGCCGCCTGCAGTGGAAATAGATCCAAGCCACGAAAT
AGACATGCCACCGACTCAGTACATGGCCCAGGAACCACCCTTCAGCGTGG
ATGATGGTGGAATCTCAAATCATGGTGAGTGTAAATGGATTTGGATTATT
GTCACTTTACTTGTGTTGAGCATGTTCCTATGCCTCTTTCTGTACGTGTT
CAAGGTTATTAGATGATGTAATGTATGTCTTGTCAGGGCGGCCTAAGTCG
TTATAAGCAAACCTGTTTGGCGATATATGCTGGCTGTCTTCTCAGATATT
GCGGCTCCCGGGAAGGATTTGCTCGCATTCTTCATGTATCCCTTGCGTTA
TACATTCCCGAACTCTTTCCGATGTGCTGATTCTGGCCATGTGCTTAGGT
CACGGGGGTGGATTGGCAGTCTACGAACCATATAACCCAGCCTTACATCC
TTACCCGCCCCCTGACCCCCAGGGGTATGGATCTGGAGTACCGCATAGAG
GTAAGGGTACCATCGACTTCTCCTTCTGA
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Coding sequence (CDS) from alignment at ch5:2502903..2504331+

>KJC3_007452-T1 ID=KJC3_007452-T1|Name=KJC3_007452-T1|organism=Aspergillus niger KJC3|type=CDS|length=1518bp|location=Sequence derived from alignment at ch5:2502903..2504331+ (Aspergillus niger KJC3)
ATGTCTGGAGAACCCGGCAAGCGGCCCAAGGCTGCGTCGCGAAAGACTTC
CCTTGACTCGAACCCACCAGGGGACCAACATGTTGAGTTTGTCAATGCGG
AAAATGAAACCCCGTCAAGTGGTGTTGGGAGGCTTTCGGCAGGACGGGGA
GCCATCTTGGCCAATGCTGCCAGAGAGTTGCAGGATGTCGCTGCTAGGCA
ATCAGTTGGCCATACGAGCAACAGGCCCCAACCACCACATCTGGGGACGC
GAAGATCTCGACAATATGAAGAACCAGCCGTCCCGCAAACGTGGGCAATA
GGATCTAAGGGCAAGCAGCATCATCGACAAATGCCCGCTCCTAAGATGGT
AGCACCGACTCAATCTGGCACAGGTGATGGCTATACTTATAGTTCATATA
AGCGGCCGCCTTTATTCACGCAGGCCCCCAAGAATAAGGTCCATCGGCCA
AAGTCCCCTACTGACGGGCACAGTCAATTCCTAACAAGAACGTTGGATAT
GTTCAACAGCCGTAACGAGCCGCCTGCAGTGGAAATAGATCCAAGCCACG
AAATAGACATGCCACCGACTCAGTACATGGCCCAGGAACCACCCTTCAGC
GTGGATGATGGTGGAATCTCAAATCATGGTCACGGGGGTGGATTGGCAGT
CTACGAACCATATAACCCAGCCTTACATCCTTACCCGCCCCCTGACCCCC
AGGGGTATGGATCTGGAGTACCGCATAGAGGTAAGGGTACCATCGACTTC
TCCTTCTGAATGTCTGGAGAACCCGGCAAGCGGCCCAAGGCTGCGTCGCG
AAAGACTTCCCTTGACTCGAACCCACCAGGGGACCAACATGTTGAGTTTG
TCAATGCGGAAAATGAAACCCCGTCAAGTGGTGTTGGGAGGCTTTCGGCA
GGACGGGGAGCCATCTTGGCCAATGCTGCCAGAGAGTTGCAGGATGTCGC
TGCTAGGCAATCAGTTGGCCATACGAGCAACAGGCCCCAACCACCACATC
TGGGGACGCGAAGATCTCGACAATATGAAGAACCAGCCGTCCCGCAAACG
TGGGCAATAGGATCTAAGGGCAAGCAGCATCATCGACAAATGCCCGCTCC
TAAGATGGTAGCACCGACTCAATCTGGCACAGGTGATGGCTATACTTATA
GTTCATATAAGCGGCCGCCTTTATTCACGCAGGCCCCCAAGAATAAGGTC
CATCGGCCAAAGTCCCCTACTGACGGGCACAGTCAATTCCTAACAAGAAC
GTTGGATATGTTCAACAGCCGTAACGAGCCGCCTGCAGTGGAAATAGATC
CAAGCCACGAAATAGACATGCCACCGACTCAGTACATGGCCCAGGAACCA
CCCTTCAGCGTGGATGATGGTGGAATCTCAAATCATGGTCACGGGGGTGG
ATTGGCAGTCTACGAACCATATAACCCAGCCTTACATCCTTACCCGCCCC
CTGACCCCCAGGGGTATGGATCTGGAGTACCGCATAGAGGTAAGGGTACC
ATCGACTTCTCCTTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007452KJC3_007452Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007452-T1KJC3_007452-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007452-T1.utr5p1KJC3_007452-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_007452-T1.utr5p2KJC3_007452-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007452-T1.exon1KJC3_007452-T1.exon1Aspergillus niger KJC3exon
KJC3_007452-T1.exon2KJC3_007452-T1.exon2Aspergillus niger KJC3exon
KJC3_007452-T1.exon3KJC3_007452-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007452-T1.cdsKJC3_007452-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2502903..2504331 +
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