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KJC3_007483-T1, KJC3_007483-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007483-T1
Unique NameKJC3_007483-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2607232..2608906-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007483-T1 ID=KJC3_007483-T1|Name=KJC3_007483-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1675bp|location=Sequence derived from alignment at ch5:2607232..2608906- (Aspergillus niger KJC3)
CCAAACCTCGAGTCCATCCATTCCGCTGCTCTCTTCCTATCCCCTCGTTC
TGCTTCCCTCCCTCTCCTCCTCCTCCACCCACGCTTTCCCCTCTTCTTCC
CCCCGACTCGTCCATTCTCCGTATCTCCGTCAAGATGGGTGTCACCTTCG
ACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCAATGGCCTC
GACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTATGTCGCCCA
GCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGCCTTGCTGA
AGTTGTGAGTTCATGCGCCTTTCTATCCAGTTCAAAACACTTTCAGCCGA
AACATAAAGAGCTCCGACGCGGGGAACCATTTTGGTTTTATGTGATGAAG
AATCTTATATCATTATCACGTTTCCTATTACCTGACACCCTACTTTGGGG
GATGTCGAGACTCCAATTCTCCTGAAACAAAACCATGATCTCAACTTTTA
TTCTATCGCATGTACATCATACCTGAATAGCGATGCTAACCCCTTCACGC
CCTCTGACAGGTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTC
ACCAACGTCCTCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTC
CCTCTGCCTTGCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCG
ACGCTGAGGCCCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATC
CAGAAGCTCGCCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCA
GTTCTGGTCCACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCG
ACGTTGCCGGATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTC
GGCAAGACCTTCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGA
CCTGCGCAGCCGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCT
GGGAGGTTGACAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAAC
AAGGAGAACGAGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGA
CATGTTCGGCCGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAGCGG
ATCGATAAAAAAGATATCCGCATCGCAACGCAGCCTTTCTCGTTCTAGAT
TCCCTTTCTATTCTTGCTAATATTTTGCCTCGAATCGAAGATCAGACCTT
CCCCCAGGTCTCGATCTCGGTCTGTCTTGTTGGAAGAATGACCACCCGAA
AAGAAAATTCAAAAGAAGAACACGGGACGAAGTGTCTGCTTCGGATACCC
CCCATGACACGAGCTCGAAGCCTCTTATAACCAAAAAAAGATGATGATGA
CGGGGATAGACCAGCATGGGAGAGGGTTGGGAAGTCCGGACCTGGCGCAA
TTGGCGTTTCGAGTTTTGCTTCTGCATGACTAGGTTGTGTTTTATCATCA
TCATCATCTTTCTTTCTTCTTCCACCCTCATATATCATTTTCTCCTTGAT
TATCCTCTCACCATATTCTCTCTACGTGAAAAGATAACGCAATTTCACCG
AAGATATCCATAGTGTGCGTATACAAAAAGCGATCAGTACCAGTACAGTA
CAACATTTCAAAGATCATGACCAGC
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Coding sequence (CDS) from alignment at ch5:2607232..2608906-

>KJC3_007483-T1 ID=KJC3_007483-T1|Name=KJC3_007483-T1|organism=Aspergillus niger KJC3|type=CDS|length=1512bp|location=Sequence derived from alignment at ch5:2607232..2608906- (Aspergillus niger KJC3)
GTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTCACCAACGTCC
TCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTCCCTCTGCCTT
GCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCGACGCTGAGGC
CCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATCCAGAAGCTCG
CCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCAGTTCTGGTCC
ACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCGACGTTGCCGG
ATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTCGGCAAGACCT
TCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGACCTGCGCAGC
CGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCTGGGAGGTTGA
CAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAACAAGGAGAACG
AGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGACATGTTCGGC
CGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAATGGGTGTCACCTT
CGACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCAATGGCC
TCGACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTATGTCGCC
CAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGCCTTGCT
GAAGTTGTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTCACCA
ACGTCCTCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTCCCTC
TGCCTTGCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCGACGC
TGAGGCCCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATCCAGA
AGCTCGCCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCAGTTC
TGGTCCACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCGACGT
TGCCGGATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTCGGCA
AGACCTTCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGACCTG
CGCAGCCGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCTGGGA
GGTTGACAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAACAAGG
AGAACGAGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGACATG
TTCGGCCGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAATGGGTGT
CACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCA
ATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTAT
GTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGC
CTTGCTGAAGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006446regulation of translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0043022ribosome binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007483KJC3_007483Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007483-T1KJC3_007483-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007483-T1.cdsKJC3_007483-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007483-T1.utr3p1KJC3_007483-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007483-T1.exon2KJC3_007483-T1.exon2Aspergillus niger KJC3exon
KJC3_007483-T1.exon1KJC3_007483-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007483-T1.utr5p1KJC3_007483-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR009374
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR016020
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR033464
DBxrefPFAM:PF10075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2607232..2608906 -
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