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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2649458..2650664+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007499-T1 ID=KJC3_007499-T1|Name=KJC3_007499-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1207bp|location=Sequence derived from alignment at ch5:2649458..2650664+ (Aspergillus niger KJC3)
GTGGCAATAACTAGGGACTGGCCCATGCTTTTAGACAAGTATATTCTAAT
TCTAGTTCTATCATGTGTTCATCCATCTCTTGTCGGAGTATTCCCGAGTC
TGTAACTCCGAAACGGGTATATAACCCCCTCTTCTTCGCTCCGGATTCCG
ATGCGGGGTAAGAACTATAACTCCCAAAGTGAATCAATACATAACTGCAA
ACAAACCATATATATCCTCATAATATCAACAAAATCAAGATCATATCAAC
AGAAATCATATAAGAAAAAAACATATCGACACAATCATACCAACAAATCA
CATCAAAAGGAACATATCAACAAATCATATCAACAACAAATCATAATAGC
ATCATGTCATCATCATCATCATTCACAGACAAAGTCTATACCATAACCGG
CCTCTCAGGCATTGGCCTCGCCGTGGCACGTCAACTCCACGCCCAAGGTG
CTCGTCTCTCCCTTGCGGATATATCCGAATCCGCGCTGCAGCACGCACGG
GCCCAGCTCCCCAACGCCACCGATGAGAACGTTCTCACCAGAGTCGTTGA
TGTTGGATCCTGCTCGTCTGTGGAAGACTGGATCGATGCCACGGTTCGTC
ATTTTGGCCGGCTCGACGGCGCGGCAAACATGGCGGGCATGATTGGGAGT
AAGCATGGCACGGGCTCGTTGTTGGAGCAGGATGATGCAGAGTGGGATAT
GTTGTTGAGGGTGAATTTGTCCGGGGTGATGTATTGCATGCGGGCGCAGA
TAAGGGCTATTCAGGGGACGAGTAAGACGGGGAGTATTGTCAATGCGGCG
AGTATTCAGGGTCTTAGGGGCTTTGCGTTGCATGCTGCGTATTCGGCGAC
GAAGCATGGGGTGGTTGGATTGACGAGGAGTGTGGCTAAGGAGGTGGGGC
CGGAGATTAGGGTTAATTCTGTTGCGCCGTGAGTGTTGCTCCCTTCCCTC
TTTCTTCATTTCGTTCCGGTTACTTGGTTTGGGGGCTTGTTGGTGGCGCT
GACGGTGGTTTGTGTAGTGGGTCGATTCAGACGCCGTTGTTGGACAGGGC
CACGGCCATCCAAGGAGGGTTCACACCCACGCCGACGGTGATGCCGCGCG
TGGGAACGCCTGACGAAGTCGCCCATTCGGTGCTGTTCTTGCTCAGTGAT
GCCTCGTCGTATACCACGGGCACGGCCCTGAATGTGGATGGTGGATGGGA
CCCGTAA back to topCoding sequence (CDS) from alignment at ch5:2649458..2650664+ >KJC3_007499-T1 ID=KJC3_007499-T1|Name=KJC3_007499-T1|organism=Aspergillus niger KJC3|type=CDS|length=1530bp|location=Sequence derived from alignment at ch5:2649458..2650664+ (Aspergillus niger KJC3)
ATGTCATCATCATCATCATTCACAGACAAAGTCTATACCATAACCGGCCT
CTCAGGCATTGGCCTCGCCGTGGCACGTCAACTCCACGCCCAAGGTGCTC
GTCTCTCCCTTGCGGATATATCCGAATCCGCGCTGCAGCACGCACGGGCC
CAGCTCCCCAACGCCACCGATGAGAACGTTCTCACCAGAGTCGTTGATGT
TGGATCCTGCTCGTCTGTGGAAGACTGGATCGATGCCACGGTTCGTCATT
TTGGCCGGCTCGACGGCGCGGCAAACATGGCGGGCATGATTGGGAGTAAG
CATGGCACGGGCTCGTTGTTGGAGCAGGATGATGCAGAGTGGGATATGTT
GTTGAGGGTGAATTTGTCCGGGGTGATGTATTGCATGCGGGCGCAGATAA
GGGCTATTCAGGGGACGAGTAAGACGGGGAGTATTGTCAATGCGGCGAGT
ATTCAGGGTCTTAGGGGCTTTGCGTTGCATGCTGCGTATTCGGCGACGAA
GCATGGGGTGGTTGGATTGACGAGGAGTGTGGCTAAGGAGGTGGGGCCGG
AGATTAGGGTTAATTCTGTTGCGCCTGGGTCGATTCAGACGCCGTTGTTG
GACAGGGCCACGGCCATCCAAGGAGGGTTCACACCCACGCCGACGGTGAT
GCCGCGCGTGGGAACGCCTGACGAAGTCGCCCATTCGGTGCTGTTCTTGC
TCAGTGATGCCTCGTCGTATACCACGGGCACGGCCCTGAATGTGGATGGT
GGATGGGACCCGTAAATGTCATCATCATCATCATTCACAGACAAAGTCTA
TACCATAACCGGCCTCTCAGGCATTGGCCTCGCCGTGGCACGTCAACTCC
ACGCCCAAGGTGCTCGTCTCTCCCTTGCGGATATATCCGAATCCGCGCTG
CAGCACGCACGGGCCCAGCTCCCCAACGCCACCGATGAGAACGTTCTCAC
CAGAGTCGTTGATGTTGGATCCTGCTCGTCTGTGGAAGACTGGATCGATG
CCACGGTTCGTCATTTTGGCCGGCTCGACGGCGCGGCAAACATGGCGGGC
ATGATTGGGAGTAAGCATGGCACGGGCTCGTTGTTGGAGCAGGATGATGC
AGAGTGGGATATGTTGTTGAGGGTGAATTTGTCCGGGGTGATGTATTGCA
TGCGGGCGCAGATAAGGGCTATTCAGGGGACGAGTAAGACGGGGAGTATT
GTCAATGCGGCGAGTATTCAGGGTCTTAGGGGCTTTGCGTTGCATGCTGC
GTATTCGGCGACGAAGCATGGGGTGGTTGGATTGACGAGGAGTGTGGCTA
AGGAGGTGGGGCCGGAGATTAGGGTTAATTCTGTTGCGCCTGGGTCGATT
CAGACGCCGTTGTTGGACAGGGCCACGGCCATCCAAGGAGGGTTCACACC
CACGCCGACGGTGATGCCGCGCGTGGGAACGCCTGACGAAGTCGCCCATT
CGGTGCTGTTCTTGCTCAGTGATGCCTCGTCGTATACCACGGGCACGGCC
CTGAATGTGGATGGTGGATGGGACCCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007499-T1.utr5p1 | KJC3_007499-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2649458..2650664 + |
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