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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2660287..2662137+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007503-T1 ID=KJC3_007503-T1|Name=KJC3_007503-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1851bp|location=Sequence derived from alignment at ch5:2660287..2662137+ (Aspergillus niger KJC3)
CGCACGGCTTTCACTCCATTGAACCACCTCTACAGACTGTATTCCTACTT
ATCGACAGTCTATTCTTACCTATCCCTCCATATTCATCTATTATCGCGAC
CAACATGCAATAATGGCGACCGTCATGGCTCCGGAGATGGCAACCCAATC
CGCCAATCTACGCGCCGAACTGAAAGAATGGGAGCGAGCTTTTGCGGACG
CCAATGGAGGGAGGAAAGCCGAAAGAAGCGATATCAAGAAAGTCCCTGAA
ATTGGTATGAACATTACTCTCCATCCAGCTTTTTCCATCCACCATCCAAC
TCACCATCGCACAATCTAGCCGCAAAATACAAAGAATACTCCCGCCTAAA
AGCCCTCGAGACATCATCCACCACCACCAAGACCGACAAAAACCCCGTCC
AACTAGAAGAACGGCCCAAGAAGCGCAAACACACATCCCCCAACGGCCCT
TCAACATCTCTTACCACATCAACTCCCCGCAAGACCGCCAAAGGCGCCGC
AGCATTCGAAACGCCCTCCAAAGCCCGCCCCGTCGCAACATCCCACCCCT
CCGAAGTCGATCCCTACGACTCCCCCTCCGTCCTCCGTCGTCTCTTCAGC
CCAAGCACACATCAAACCCCCCTAAAGACAGCCATCGGCCCCACCCCGCA
ACGCGACGGCAAGGCCCTCGGCCTCTTCGACCTCCTCTCCGAGTCCGGCG
GCAGCACCGCCACTCCATCCGCAACACGCATAGCCAGTCTCCGCGACACA
GCAGTTCAGACACCCTCACGACGAAGGAAACAGCTCGACACGATCGCCGA
AGAAGGCGAAGATGAAGACGACGACGAAGACGACAATAGTCCCAGAGGAG
CACGCACCCCCGCATCATCAGGCAAGAAATGGATGCTCTCCACTCTCTTC
GCAACCCCAACGACATGGCGCTACGCAATGATGGAGAACGAAAAACAAGG
TCCACGGTACCCAGCATACATTCGAACCGACGACACAGCTTCAAAACAGA
CAGAATCGCAGGCCGGACCCAACGCCGAAGAAACCCCTTCGTTCCTCCGC
CGCGCAACAGCAACCCGCTACAATCCTAACAATAACGCTGCAGACGACGG
CGGCCTAAGCCCCATAGCCGTGCGCAAGAGGCCCCAATTCGTCGGAAAAG
GTCTCTCGGCTCTAGTCCAGGGTCTCCGCGATATGGAAGAAGAGCAAATG
CAAGATGACATGGACATACTTCATGAAATCGAGGCCGAACAGCAGCAACA
AGCGGCAGGAACCATCACAGATAGCCAGACACAACAACAATACCCGCCTA
CCGAAGAATCCCGCCCATTCAAAAAGAAGGGCCAGAAACGAACCACTCGC
AAAGTGCGCATGAAGCCCGTTACCGCGAAACCAAAACCGGAGCCCCAGTT
ACCCGCTTCGGACAATGAAGAAGAAGAAGAGGATAATGAGGCGGATATAG
TCCCCGAAACACAACATCTCAATATCCCGGGGACTGAAACGCACGATACA
GATGACGAACTCAACTCAATCCATTCTATATCAATGTCCGAACCGGACTT
GGACCCCGACTATGACTACGATGAAGAGGAAGAGGCATTATCTAAGCCTC
CGGCAAGGAGTAAGAGTTTCTCGGAGAGAATGAAAGAGGCGATTGAGGCG
GATAAACCACAGGCGCGAGAGAAGGAGCAGGAGGATACTGAGAAGGTGAA
GAAGAAGACGAAGTCGAAGGCTCAGACGCAGACGCAGACTCAGCCGCGTG
CTAGGAAGGTCAATCCGGCGGCGCATGCTAATTATCGGTCTTTGAAGCTG
CGGAATAGAGGAAGTAAGGGGAGATACGGGGGACGGTTTGGGAGGAGGTA
G back to topCoding sequence (CDS) from alignment at ch5:2660287..2662137+ >KJC3_007503-T1 ID=KJC3_007503-T1|Name=KJC3_007503-T1|organism=Aspergillus niger KJC3|type=CDS|length=3348bp|location=Sequence derived from alignment at ch5:2660287..2662137+ (Aspergillus niger KJC3)
ATGGCGACCGTCATGGCTCCGGAGATGGCAACCCAATCCGCCAATCTACG
CGCCGAACTGAAAGAATGGGAGCGAGCTTTTGCGGACGCCAATGGAGGGA
GGAAAGCCGAAAGAAGCGATATCAAGAAAGTCCCTGAAATTGCCGCAAAA
TACAAAGAATACTCCCGCCTAAAAGCCCTCGAGACATCATCCACCACCAC
CAAGACCGACAAAAACCCCGTCCAACTAGAAGAACGGCCCAAGAAGCGCA
AACACACATCCCCCAACGGCCCTTCAACATCTCTTACCACATCAACTCCC
CGCAAGACCGCCAAAGGCGCCGCAGCATTCGAAACGCCCTCCAAAGCCCG
CCCCGTCGCAACATCCCACCCCTCCGAAGTCGATCCCTACGACTCCCCCT
CCGTCCTCCGTCGTCTCTTCAGCCCAAGCACACATCAAACCCCCCTAAAG
ACAGCCATCGGCCCCACCCCGCAACGCGACGGCAAGGCCCTCGGCCTCTT
CGACCTCCTCTCCGAGTCCGGCGGCAGCACCGCCACTCCATCCGCAACAC
GCATAGCCAGTCTCCGCGACACAGCAGTTCAGACACCCTCACGACGAAGG
AAACAGCTCGACACGATCGCCGAAGAAGGCGAAGATGAAGACGACGACGA
AGACGACAATAGTCCCAGAGGAGCACGCACCCCCGCATCATCAGGCAAGA
AATGGATGCTCTCCACTCTCTTCGCAACCCCAACGACATGGCGCTACGCA
ATGATGGAGAACGAAAAACAAGGTCCACGGTACCCAGCATACATTCGAAC
CGACGACACAGCTTCAAAACAGACAGAATCGCAGGCCGGACCCAACGCCG
AAGAAACCCCTTCGTTCCTCCGCCGCGCAACAGCAACCCGCTACAATCCT
AACAATAACGCTGCAGACGACGGCGGCCTAAGCCCCATAGCCGTGCGCAA
GAGGCCCCAATTCGTCGGAAAAGGTCTCTCGGCTCTAGTCCAGGGTCTCC
GCGATATGGAAGAAGAGCAAATGCAAGATGACATGGACATACTTCATGAA
ATCGAGGCCGAACAGCAGCAACAAGCGGCAGGAACCATCACAGATAGCCA
GACACAACAACAATACCCGCCTACCGAAGAATCCCGCCCATTCAAAAAGA
AGGGCCAGAAACGAACCACTCGCAAAGTGCGCATGAAGCCCGTTACCGCG
AAACCAAAACCGGAGCCCCAGTTACCCGCTTCGGACAATGAAGAAGAAGA
AGAGGATAATGAGGCGGATATAGTCCCCGAAACACAACATCTCAATATCC
CGGGGACTGAAACGCACGATACAGATGACGAACTCAACTCAATCCATTCT
ATATCAATGTCCGAACCGGACTTGGACCCCGACTATGACTACGATGAAGA
GGAAGAGGCATTATCTAAGCCTCCGGCAAGGAGTAAGAGTTTCTCGGAGA
GAATGAAAGAGGCGATTGAGGCGGATAAACCACAGGCGCGAGAGAAGGAG
CAGGAGGATACTGAGAAGGTGAAGAAGAAGACGAAGTCGAAGGCTCAGAC
GCAGACGCAGACTCAGCCGCGTGCTAGGAAGGTCAATCCGGCGGCGCATG
CTAATTATCGGTCTTTGAAGCTGCGGAATAGAGGAAGTAAGGGGAGATAC
GGGGGACGGTTTGGGAGGAGGTAGATGGCGACCGTCATGGCTCCGGAGAT
GGCAACCCAATCCGCCAATCTACGCGCCGAACTGAAAGAATGGGAGCGAG
CTTTTGCGGACGCCAATGGAGGGAGGAAAGCCGAAAGAAGCGATATCAAG
AAAGTCCCTGAAATTGCCGCAAAATACAAAGAATACTCCCGCCTAAAAGC
CCTCGAGACATCATCCACCACCACCAAGACCGACAAAAACCCCGTCCAAC
TAGAAGAACGGCCCAAGAAGCGCAAACACACATCCCCCAACGGCCCTTCA
ACATCTCTTACCACATCAACTCCCCGCAAGACCGCCAAAGGCGCCGCAGC
ATTCGAAACGCCCTCCAAAGCCCGCCCCGTCGCAACATCCCACCCCTCCG
AAGTCGATCCCTACGACTCCCCCTCCGTCCTCCGTCGTCTCTTCAGCCCA
AGCACACATCAAACCCCCCTAAAGACAGCCATCGGCCCCACCCCGCAACG
CGACGGCAAGGCCCTCGGCCTCTTCGACCTCCTCTCCGAGTCCGGCGGCA
GCACCGCCACTCCATCCGCAACACGCATAGCCAGTCTCCGCGACACAGCA
GTTCAGACACCCTCACGACGAAGGAAACAGCTCGACACGATCGCCGAAGA
AGGCGAAGATGAAGACGACGACGAAGACGACAATAGTCCCAGAGGAGCAC
GCACCCCCGCATCATCAGGCAAGAAATGGATGCTCTCCACTCTCTTCGCA
ACCCCAACGACATGGCGCTACGCAATGATGGAGAACGAAAAACAAGGTCC
ACGGTACCCAGCATACATTCGAACCGACGACACAGCTTCAAAACAGACAG
AATCGCAGGCCGGACCCAACGCCGAAGAAACCCCTTCGTTCCTCCGCCGC
GCAACAGCAACCCGCTACAATCCTAACAATAACGCTGCAGACGACGGCGG
CCTAAGCCCCATAGCCGTGCGCAAGAGGCCCCAATTCGTCGGAAAAGGTC
TCTCGGCTCTAGTCCAGGGTCTCCGCGATATGGAAGAAGAGCAAATGCAA
GATGACATGGACATACTTCATGAAATCGAGGCCGAACAGCAGCAACAAGC
GGCAGGAACCATCACAGATAGCCAGACACAACAACAATACCCGCCTACCG
AAGAATCCCGCCCATTCAAAAAGAAGGGCCAGAAACGAACCACTCGCAAA
GTGCGCATGAAGCCCGTTACCGCGAAACCAAAACCGGAGCCCCAGTTACC
CGCTTCGGACAATGAAGAAGAAGAAGAGGATAATGAGGCGGATATAGTCC
CCGAAACACAACATCTCAATATCCCGGGGACTGAAACGCACGATACAGAT
GACGAACTCAACTCAATCCATTCTATATCAATGTCCGAACCGGACTTGGA
CCCCGACTATGACTACGATGAAGAGGAAGAGGCATTATCTAAGCCTCCGG
CAAGGAGTAAGAGTTTCTCGGAGAGAATGAAAGAGGCGATTGAGGCGGAT
AAACCACAGGCGCGAGAGAAGGAGCAGGAGGATACTGAGAAGGTGAAGAA
GAAGACGAAGTCGAAGGCTCAGACGCAGACGCAGACTCAGCCGCGTGCTA
GGAAGGTCAATCCGGCGGCGCATGCTAATTATCGGTCTTTGAAGCTGCGG
AATAGAGGAAGTAAGGGGAGATACGGGGGACGGTTTGGGAGGAGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007503-T1.utr5p1 | KJC3_007503-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021110 |
| DBxref | PFAM:PF11719 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2660287..2662137 + |
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