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KJC3_007504-T1, KJC3_007504-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007504-T1
Unique NameKJC3_007504-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2662215..2663577-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007504-T1 ID=KJC3_007504-T1|Name=KJC3_007504-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1363bp|location=Sequence derived from alignment at ch5:2662215..2663577- (Aspergillus niger KJC3)
CCATGACACCCATCAACCCGTCCTCAAGCTTCTAACAAGCGGCCGGGTGT
CGATCTCATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGA
CTCTGCAAGAGGTAGCGCGCGATGAAGGCGAGCACGACGCTAACCCGTGC
GTGATCTGTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCG
CCATGCGAACTTTGACTTTCTGTGTTTGCTGAGCTGGCTGGAACAGCGTC
GCAACTGTCCGCTATGTATGTACATCCTCCGTGATAGACACCTGCCCGTA
TCCAGCAAATATCTGACTAGATATAGGCAAGAGTGAGATCACATCAGTGA
AATACAACCTCGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCA
AGCACAAGCGACGCCACAACCACTTCCTCAACCTCACACCTACCGACACC
CTCACATCATCGCCCACCCCGCCGACCCCGTCGTCCGCGCAGCCCCCGTC
CCCAACAACAACAACAACAACAGTCCCCCGACCCCCTCCGCCGCCGCCAA
CACATCTACCGTCACCAACTCTATTCCCTCCGCGTCGGCTCCAACCGTCT
CTCACAATACCGCGAACTGACACCGGAGCGCTTTAATCGCGAAGAAGACC
TCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAG
TTTCTCAACCCAGAATCAGGGGACCGACAAGGCGGAGGGGTTGCGCGCCC
CGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTAC
TCGAGTATATCATTGCTATTCTACGGACTGTGGATATTAAGGGTAGTGCT
GGGCAGGCGGAGGAGCTGTTACGCGATTTTCTGGGCAGGGAGAATGCCCG
GTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCTC
TTGAGGACTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGCGGTGGT
GGTAATGCTCATCCTTCGCGGCGGGAGCGCGAGGAGAGTAGAACTGCTAC
GCCGGTATATACCGATTACAGGGGACCTCGGTTTCCTAGTAGTTCTTCTG
GGCGGGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGG
GATGCTGTGGCTCAGGCGAGACGGGTGCAATATGCCCGGGATCGGTATGT
TCCCGATTGAAGCAAGGCTAGGTGTACGGACTACTATCCATGTTGTATTT
GAAGGACTATAACTAGACAAATAGACAGTTGCTTCTCAATATATAGTTCA
AGTGATCTGGTATCTCAAGTATGAAGATTATATACTTATGCTATGGTCAT
AGTCATTGCTCAT
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Coding sequence (CDS) from alignment at ch5:2662215..2663577-

>KJC3_007504-T1 ID=KJC3_007504-T1|Name=KJC3_007504-T1|organism=Aspergillus niger KJC3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch5:2662215..2663577- (Aspergillus niger KJC3)
GCAAGAGTGAGATCACATCAGTGAAATACAACCTCGAGGACATCAACGGC
CCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACGCCACAACCACTTC
CTCAACCTCACACCTACCGACACCCTCACATCATCGCCCACCCCGCCGAC
CCCGTCGTCCGCGCAGCCCCCGTCCCCAACAACAACAACAACAACAGTCC
CCCGACCCCCTCCGCCGCCGCCAACACATCTACCGTCACCAACTCTATTC
CCTCCGCGTCGGCTCCAACCGTCTCTCACAATACCGCGAACTGACACCGG
AGCGCTTTAATCGCGAAGAAGACCTCGTCTCCCGAGCCCGGAAATGGATC
CGCCGGGAGCTGCAAGTATTCGAGTTTCTCAACCCAGAATCAGGGGACCG
ACAAGGCGGAGGGGTTGCGCGCCCCGGTCAGCAGAGACTCGAAAACCGGC
GCGGCAATAACGCAGAGTTTCTACTCGAGTATATCATTGCTATTCTACGG
ACTGTGGATATTAAGGGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGCGA
TTTTCTGGGCAGGGAGAATGCCCGGTTGTTTCTGCATGAGTTGCAGGCTT
GGTTGAGGAGTCCTTATATCTCTCTTGAGGACTGGGATCGGAATGTCCAG
TATGAGGATACCGTGGGCGGTGGTGGTAATGCTCATCCTTCGCGGCGGGA
GCGCGAGGAGAGTAGAACTGCTACGCCGGTATATACCGATTACAGGGGAC
CTCGGTTTCCTAGTAGTTCTTCTGGGCGGGTGAATAAGCCGCCGTATCAT
CGGAGAGGGGGCAGGTCGTCTCGGGATGCTGTGGCTCAGGCGAGACGGGT
GCAATATGCCCGGGATCGGTATGTTCCCGATTGAATGTCCGATGATGTCG
ACCTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCGCGAT
GAAGGCGAGCACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTC
CGAAGCCGCCATCGCGGTGCCATGTCGCCATGCGAACTTTGACTTTCTGT
GTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTATGCAAGAGT
GAGATCACATCAGTGAAATACAACCTCGAGGACATCAACGGCCCCAAGAT
CTACCAACTCCCAGCAAGCACAAGCGACGCCACAACCACTTCCTCAACCT
CACACCTACCGACACCCTCACATCATCGCCCACCCCGCCGACCCCGTCGT
CCGCGCAGCCCCCGTCCCCAACAACAACAACAACAACAGTCCCCCGACCC
CCTCCGCCGCCGCCAACACATCTACCGTCACCAACTCTATTCCCTCCGCG
TCGGCTCCAACCGTCTCTCACAATACCGCGAACTGACACCGGAGCGCTTT
AATCGCGAAGAAGACCTCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGA
GCTGCAAGTATTCGAGTTTCTCAACCCAGAATCAGGGGACCGACAAGGCG
GAGGGGTTGCGCGCCCCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAAT
AACGCAGAGTTTCTACTCGAGTATATCATTGCTATTCTACGGACTGTGGA
TATTAAGGGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGCGATTTTCTGG
GCAGGGAGAATGCCCGGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGG
AGTCCTTATATCTCTCTTGAGGACTGGGATCGGAATGTCCAGTATGAGGA
TACCGTGGGCGGTGGTGGTAATGCTCATCCTTCGCGGCGGGAGCGCGAGG
AGAGTAGAACTGCTACGCCGGTATATACCGATTACAGGGGACCTCGGTTT
CCTAGTAGTTCTTCTGGGCGGGTGAATAAGCCGCCGTATCATCGGAGAGG
GGGCAGGTCGTCTCGGGATGCTGTGGCTCAGGCGAGACGGGTGCAATATG
CCCGGGATCGGTATGTTCCCGATTGAATGTCCGATGATGTCGACCTGCAA
CAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCGCGATGAAGGCGA
GCACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCCGAAGCCG
CCATCGCGGTGCCATGTCGCCATGCGAACTTTGACTTTCTGTGTTTGCTG
AGCTGGCTGGAACAGCGTCGCAACTGTCCGCTAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007504KJC3_007504Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007504-T1KJC3_007504-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007504-T1.cdsKJC3_007504-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007504-T1.utr3p1KJC3_007504-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007504-T1.exon2KJC3_007504-T1.exon2Aspergillus niger KJC3exon
KJC3_007504-T1.exon1KJC3_007504-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007504-T1.utr5p1KJC3_007504-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
DBxrefPFAM:PF13639
DBxrefPFAM:PF13920
DBxrefPFAM:PF00097
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2662215..2663577 -
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