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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2680250..2681937- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007514-T1 ID=KJC3_007514-T1|Name=KJC3_007514-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1688bp|location=Sequence derived from alignment at ch5:2680250..2681937- (Aspergillus niger KJC3)
CTCGGCCATCTGCTTCTTCCATGAAGCCAGGCAAACATGGCAGCAGACCA
CACCAACACCAACCCGTTAGATGAGCGGTTCGAAACCCTCGTCCAGGAGA
CATTGAATTACTGGCACGTTCCAGGCATTTCAATCGCAGTAGTCGATGGA
GACAACACCTGGGCCAAGGCAGGTGTCCCATACATCTCCAATGATCAAGA
TAATAGACAGAACTCCCATACTAACAAACAAGCACAGGGGTACGGCATTG
CGACCTTCCCCTCTGAGCCCGTAACCCCTTCAACGCTCTTCTATGCCGGA
AGCACCACGAAAGCTTTCACCGCAGCCTTGATGGCCACCTTCGTCGAAGA
CAACGACACCCATCCCCAAGTACACTGGGACACGCCCATCAGCCACCTCA
TCCGCGACGACTTCGTCCTACACGACGAGCACACAACCGAACACACCACC
ATCGAAGATGCCCTATCCCATCGCTCAGGCCTCCCCCGTCACGATCAAGC
CTACGGCAACCGTCTCACCCGCGACAAAGCCGTACGAACAATAGTGCGTC
AGTTGCGCCATCTCCCACTAACCGCTCCTCCGCGCACCAAACTCCAATAC
TGCAATCTCATGTACGTCGTCGTCTCTCACGTCATCGAGACCCTCACCGG
CGGAGAATGGCTAGGCGACACCCTAGCTCGCACCATCTGGCAACCCCTTG
ACATGAAATCCACATTCTTTGACCTCAACAACGCCAAAGCATCCCCTCAC
CACCTAGCACACGGATATTACCATACCCCAAGCGACAAGGGCAGCGACAG
CCACTACCACGAAGTCCCCTGGATGCCACTAGACGAAATCTCCGGCGCCG
GAAGCATCATCACCAACGTCCTCGATTACGCAAAATGGGCGCGCGCACTA
CTTAACCAAACCGAGCCTTTATCGCCCGCCGTATACAAAGCAATCTTCGA
ACCGCGAACTGTTCTGCCTCCCGAGGCGCCGTTCACGGGCCCGCGAGCAT
ACGCTCTGGGCTGGTATACGGGCGTATACCAAGGCGTGCAGTTCTTCGAG
CATACAGGGGGGATGAATGCGTTCGGGGCCGAGATAATCTTATTCCCGAG
CTTGAAGTATGCGGTTGTCATGTTGGCGAATACAGCCGGGACGTCGAATT
ACGCGCAGAAGGCGCTGGCATTTCGGTTGGTGGATGAGAAACTTGGTGTG
CCGGTTGAGAGGAGGTTTGACTGGAATGCGAAGTATGTTTGGGATCAGGG
CTCTTTTCAGGGAAAGGTGGTTGATGCTAACTGTTTGATGTTAGGAATAT
GGCACACATAGAAGAGGAGAAGAAAAAGGCCCTCGATGCTATTCATAAGG
TCCCCGCGCATGTGATTCCGCACTCGTTAGACCTACACGAATATGTTGGG
ACGTATGTGCATCCGGGCTATCAGACTGTTGAGATTTATCTTGATCGGTC
GAAAAGTACACTACGGGCTGACCGGGATCGTACAACTTGGCCGGAGTATC
TGAGCTTCAAACATGTCAATGGGGAACATTTTCTCGCTATATCGGAGCAT
GTTGGAGACTTGGGGGCTTTCTTTCCTGATGTGTATGCGGCGGAATTTCG
AATTGGGGAAAAGGGGAAGCCGTCCGCGCTTGGAGTGGCGTGGGAGAAGA
CTATGAAGGAGAAGATATGGTTTACGCGGTCGGATTAA back to topCoding sequence (CDS) from alignment at ch5:2680250..2681937- >KJC3_007514-T1 ID=KJC3_007514-T1|Name=KJC3_007514-T1|organism=Aspergillus niger KJC3|type=CDS|length=4563bp|location=Sequence derived from alignment at ch5:2680250..2681937- (Aspergillus niger KJC3)
GAATATGGCACACATAGAAGAGGAGAAGAAAAAGGCCCTCGATGCTATTC
ATAAGGTCCCCGCGCATGTGATTCCGCACTCGTTAGACCTACACGAATAT
GTTGGGACGTATGTGCATCCGGGCTATCAGACTGTTGAGATTTATCTTGA
TCGGTCGAAAAGTACACTACGGGCTGACCGGGATCGTACAACTTGGCCGG
AGTATCTGAGCTTCAAACATGTCAATGGGGAACATTTTCTCGCTATATCG
GAGCATGTTGGAGACTTGGGGGCTTTCTTTCCTGATGTGTATGCGGCGGA
ATTTCGAATTGGGGAAAAGGGGAAGCCGTCCGCGCTTGGAGTGGCGTGGG
AGAAGACTATGAAGGAGAAGATATGGTTTACGCGGTCGGATTAAGGGTAC
GGCATTGCGACCTTCCCCTCTGAGCCCGTAACCCCTTCAACGCTCTTCTA
TGCCGGAAGCACCACGAAAGCTTTCACCGCAGCCTTGATGGCCACCTTCG
TCGAAGACAACGACACCCATCCCCAAGTACACTGGGACACGCCCATCAGC
CACCTCATCCGCGACGACTTCGTCCTACACGACGAGCACACAACCGAACA
CACCACCATCGAAGATGCCCTATCCCATCGCTCAGGCCTCCCCCGTCACG
ATCAAGCCTACGGCAACCGTCTCACCCGCGACAAAGCCGTACGAACAATA
GTGCGTCAGTTGCGCCATCTCCCACTAACCGCTCCTCCGCGCACCAAACT
CCAATACTGCAATCTCATGTACGTCGTCGTCTCTCACGTCATCGAGACCC
TCACCGGCGGAGAATGGCTAGGCGACACCCTAGCTCGCACCATCTGGCAA
CCCCTTGACATGAAATCCACATTCTTTGACCTCAACAACGCCAAAGCATC
CCCTCACCACCTAGCACACGGATATTACCATACCCCAAGCGACAAGGGCA
GCGACAGCCACTACCACGAAGTCCCCTGGATGCCACTAGACGAAATCTCC
GGCGCCGGAAGCATCATCACCAACGTCCTCGATTACGCAAAATGGGCGCG
CGCACTACTTAACCAAACCGAGCCTTTATCGCCCGCCGTATACAAAGCAA
TCTTCGAACCGCGAACTGTTCTGCCTCCCGAGGCGCCGTTCACGGGCCCG
CGAGCATACGCTCTGGGCTGGTATACGGGCGTATACCAAGGCGTGCAGTT
CTTCGAGCATACAGGGGGGATGAATGCGTTCGGGGCCGAGATAATCTTAT
TCCCGAGCTTGAAGTATGCGGTTGTCATGTTGGCGAATACAGCCGGGACG
TCGAATTACGCGCAGAAGGCGCTGGCATTTCGGTTGGTGGATGAGAAACT
TGGTGTGCCGGTTGAGAGGAGGTTTGACTGGAATGCGAAATGGCAGCAGA
CCACACCAACACCAACCCGTTAGATGAGCGGTTCGAAACCCTCGTCCAGG
AGACATTGAATTACTGGCACGTTCCAGGCATTTCAATCGCAGTAGTCGAT
GGAGACAACACCTGGGCCAAGGAATATGGCACACATAGAAGAGGAGAAGA
AAAAGGCCCTCGATGCTATTCATAAGGTCCCCGCGCATGTGATTCCGCAC
TCGTTAGACCTACACGAATATGTTGGGACGTATGTGCATCCGGGCTATCA
GACTGTTGAGATTTATCTTGATCGGTCGAAAAGTACACTACGGGCTGACC
GGGATCGTACAACTTGGCCGGAGTATCTGAGCTTCAAACATGTCAATGGG
GAACATTTTCTCGCTATATCGGAGCATGTTGGAGACTTGGGGGCTTTCTT
TCCTGATGTGTATGCGGCGGAATTTCGAATTGGGGAAAAGGGGAAGCCGT
CCGCGCTTGGAGTGGCGTGGGAGAAGACTATGAAGGAGAAGATATGGTTT
ACGCGGTCGGATTAAGGGTACGGCATTGCGACCTTCCCCTCTGAGCCCGT
AACCCCTTCAACGCTCTTCTATGCCGGAAGCACCACGAAAGCTTTCACCG
CAGCCTTGATGGCCACCTTCGTCGAAGACAACGACACCCATCCCCAAGTA
CACTGGGACACGCCCATCAGCCACCTCATCCGCGACGACTTCGTCCTACA
CGACGAGCACACAACCGAACACACCACCATCGAAGATGCCCTATCCCATC
GCTCAGGCCTCCCCCGTCACGATCAAGCCTACGGCAACCGTCTCACCCGC
GACAAAGCCGTACGAACAATAGTGCGTCAGTTGCGCCATCTCCCACTAAC
CGCTCCTCCGCGCACCAAACTCCAATACTGCAATCTCATGTACGTCGTCG
TCTCTCACGTCATCGAGACCCTCACCGGCGGAGAATGGCTAGGCGACACC
CTAGCTCGCACCATCTGGCAACCCCTTGACATGAAATCCACATTCTTTGA
CCTCAACAACGCCAAAGCATCCCCTCACCACCTAGCACACGGATATTACC
ATACCCCAAGCGACAAGGGCAGCGACAGCCACTACCACGAAGTCCCCTGG
ATGCCACTAGACGAAATCTCCGGCGCCGGAAGCATCATCACCAACGTCCT
CGATTACGCAAAATGGGCGCGCGCACTACTTAACCAAACCGAGCCTTTAT
CGCCCGCCGTATACAAAGCAATCTTCGAACCGCGAACTGTTCTGCCTCCC
GAGGCGCCGTTCACGGGCCCGCGAGCATACGCTCTGGGCTGGTATACGGG
CGTATACCAAGGCGTGCAGTTCTTCGAGCATACAGGGGGGATGAATGCGT
TCGGGGCCGAGATAATCTTATTCCCGAGCTTGAAGTATGCGGTTGTCATG
TTGGCGAATACAGCCGGGACGTCGAATTACGCGCAGAAGGCGCTGGCATT
TCGGTTGGTGGATGAGAAACTTGGTGTGCCGGTTGAGAGGAGGTTTGACT
GGAATGCGAAATGGCAGCAGACCACACCAACACCAACCCGTTAGATGAGC
GGTTCGAAACCCTCGTCCAGGAGACATTGAATTACTGGCACGTTCCAGGC
ATTTCAATCGCAGTAGTCGATGGAGACAACACCTGGGCCAAGGAATATGG
CACACATAGAAGAGGAGAAGAAAAAGGCCCTCGATGCTATTCATAAGGTC
CCCGCGCATGTGATTCCGCACTCGTTAGACCTACACGAATATGTTGGGAC
GTATGTGCATCCGGGCTATCAGACTGTTGAGATTTATCTTGATCGGTCGA
AAAGTACACTACGGGCTGACCGGGATCGTACAACTTGGCCGGAGTATCTG
AGCTTCAAACATGTCAATGGGGAACATTTTCTCGCTATATCGGAGCATGT
TGGAGACTTGGGGGCTTTCTTTCCTGATGTGTATGCGGCGGAATTTCGAA
TTGGGGAAAAGGGGAAGCCGTCCGCGCTTGGAGTGGCGTGGGAGAAGACT
ATGAAGGAGAAGATATGGTTTACGCGGTCGGATTAAGGGTACGGCATTGC
GACCTTCCCCTCTGAGCCCGTAACCCCTTCAACGCTCTTCTATGCCGGAA
GCACCACGAAAGCTTTCACCGCAGCCTTGATGGCCACCTTCGTCGAAGAC
AACGACACCCATCCCCAAGTACACTGGGACACGCCCATCAGCCACCTCAT
CCGCGACGACTTCGTCCTACACGACGAGCACACAACCGAACACACCACCA
TCGAAGATGCCCTATCCCATCGCTCAGGCCTCCCCCGTCACGATCAAGCC
TACGGCAACCGTCTCACCCGCGACAAAGCCGTACGAACAATAGTGCGTCA
GTTGCGCCATCTCCCACTAACCGCTCCTCCGCGCACCAAACTCCAATACT
GCAATCTCATGTACGTCGTCGTCTCTCACGTCATCGAGACCCTCACCGGC
GGAGAATGGCTAGGCGACACCCTAGCTCGCACCATCTGGCAACCCCTTGA
CATGAAATCCACATTCTTTGACCTCAACAACGCCAAAGCATCCCCTCACC
ACCTAGCACACGGATATTACCATACCCCAAGCGACAAGGGCAGCGACAGC
CACTACCACGAAGTCCCCTGGATGCCACTAGACGAAATCTCCGGCGCCGG
AAGCATCATCACCAACGTCCTCGATTACGCAAAATGGGCGCGCGCACTAC
TTAACCAAACCGAGCCTTTATCGCCCGCCGTATACAAAGCAATCTTCGAA
CCGCGAACTGTTCTGCCTCCCGAGGCGCCGTTCACGGGCCCGCGAGCATA
CGCTCTGGGCTGGTATACGGGCGTATACCAAGGCGTGCAGTTCTTCGAGC
ATACAGGGGGGATGAATGCGTTCGGGGCCGAGATAATCTTATTCCCGAGC
TTGAAGTATGCGGTTGTCATGTTGGCGAATACAGCCGGGACGTCGAATTA
CGCGCAGAAGGCGCTGGCATTTCGGTTGGTGGATGAGAAACTTGGTGTGC
CGGTTGAGAGGAGGTTTGACTGGAATGCGAAATGGCAGCAGACCACACCA
ACACCAACCCGTTAGATGAGCGGTTCGAAACCCTCGTCCAGGAGACATTG
AATTACTGGCACGTTCCAGGCATTTCAATCGCAGTAGTCGATGGAGACAA
CACCTGGGCCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007514-T1.utr5p1 | KJC3_007514-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0219770 |
| DBxref | InterPro:IPR012338 |
| DBxref | InterPro:IPR021860 |
| DBxref | InterPro:IPR001466 |
| DBxref | PFAM:PF11954 |
| DBxref | PFAM:PF00144 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2680250..2681937 - |
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