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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2710453..2712501+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007526-T1 ID=KJC3_007526-T1|Name=KJC3_007526-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2049bp|location=Sequence derived from alignment at ch5:2710453..2712501+ (Aspergillus niger KJC3)
ATCGGAATGTATTTTCAGGGCATTGGTATCAGATGGTGCCTGTCACAGCG
TTTTCCGGCCGGTGTCCATTGATCTCATCTCACTTGCACACATAGCACGG
TAAAGTATTAATTCTTGCATCTCCCCCACCACTTCATGATTGGATCTAAA
CACAATTCATCCATCCGCAATATGCGAGTCCACTCTCTCCTCCCCATGCT
GCCCTCTGCAGTGGCAGCCCTTCCCTCTTCCTCTTTTGCTTCTTTCTCCA
ACATCGTCAACCAAACCACCTGCGGCAGCACTACGTACAGCTACACGGGC
CTCGAAGGCTACGGCTTCGTGCCCTCCAACGCCACAGACAAATATGGCGA
CACAATGGGCGGCTTTGGCAGTTCCGCTGCCTTTGACCTCTCCACCTGGC
AACGAACCAGCCCCAATACTTACACCGGCATCATCTACTGTCTCCCAGAT
CGCGGCTGGTACATCCTCTCACCCCTCCCCTCTCATAACACACCTCACTA
ACGTCTCCCACACCAGGAACACCAACGGCACCCTCAACTTCCAACCACGC
ATCCACACGTTCAACCTCACCCTCCAACTATCCCCCAATGCATCCGCCAC
CCACCCATCCCCACCCAACATCCACCTGCACTACCTCGACACCCTCCTCC
TCACCGGCCCCGACAACGCACCCCTCACCGGCCTCGACGCTATCACCACC
ACCACCAACACAACTACCACAACCACCAAGTACCCCAACTTCCCCCCTCT
CCCAATAGCCACCTACCCCGGCGACGGCTTCGGCGGCCCGGGCCCAGGCG
GACACCGCATCCCCCTCGACGCCGAAGGGCTCGCCTTACCAGCCCACGAC
CCAGCGCACATCTGGGTGTCAGATGAATACGGACCCTACGTATACAAATT
CGACAAGCGGACCGGCCGCATGGTCTACGCCATTCAACCGCCCCAGGCGT
ATCTCCCTCGGAGGAATAACACACTCAGCTTCAGCGCGGATAGTCCGCCT
ATCTATGATGCGGAGCTTGTACCCATCCCTGAAGATCCCTCAACAGGGAG
GGATAATAATCAGGGATTCGAGGGATTGACTATCTCATCTGATGGGAAGA
AGTTGTATACTTTGCTACAATCCGCATTGAATCAGGAGGGTGGGCTGAAG
AAGAAATACCGCGATCAGGCTCGGTTACTGCAGTATGATATTTCGAATTC
CTCCGGAGTAGACGCTGTCTATGAAGCGGAGTATGTGGTAACCCTCCCGA
AATACTACAATCCCGAGAAAGGTCACGATATCGTCGCCGCACAATCGGAG
ATTCATCTCCTCCCGACAGGTGACTTCCTCGTATTAGCGAGAGACTCTGG
GTTCGGACATGGACAGAGTGATTCTCTGTCCGTGTATCGACATGCTGATA
TCTTTCACATCTCAACTAATACTACGACGGACCTGAAGAACCTGAGGGGT
GTGGATGCCCCTAATGGAACCATCGCCTCTGATAAAGGTATCCTACATGA
TGGTATCACATCCGCAGAGTACTGCCCCTTTCTGGATTATAATGTCCCAG
GGCAATTGGCGAAGTTTGGTTTGCATAATGGTGGAGAGCAGGATGAGTGG
CTGTTGAATGAGAAGTGGGAGAGTTTGGCCCTTGTTCCGGTGAATCCCGA
TACGGAGGATAGCAGTACTAATAGCGGTGGGGAGAAGGAGTATTTCTTGT
TCAGTATTAGTGATAATGATTTTATTACGCAGGATGGTGAGTTGATCTTC
TCTCTTTTTCTTGGTTCACTTCGCTGGTCTTCTGAGTTGGTTTAAGGTGG
CTAACAAGTAGTTGTCTAGGGTACATGAATTTCGGTCGGTTCAGGTATGC
AGACGGCTCGGGGTATAATCTTGATAACCAGGTGTTGGCGTTTAGAGTTC
GTTTCTAGATTCTAAGGTTCTACAAAAGTTGTGGGATGGTGAGTGGTGGT
CATACTATTTCCTATGAATATATATTTGCGGGTATATGACGATGACGGAC
ACGGTACTTCAGTAGTTATTATCATCACTACTACAACTACATTACAGCC back to topCoding sequence (CDS) from alignment at ch5:2710453..2712501+ >KJC3_007526-T1 ID=KJC3_007526-T1|Name=KJC3_007526-T1|organism=Aspergillus niger KJC3|type=CDS|length=4896bp|location=Sequence derived from alignment at ch5:2710453..2712501+ (Aspergillus niger KJC3)
ATGATTGGATCTAAACACAATTCATCCATCCGCAATATGCGAGTCCACTC
TCTCCTCCCCATGCTGCCCTCTGCAGTGGCAGCCCTTCCCTCTTCCTCTT
TTGCTTCTTTCTCCAACATCGTCAACCAAACCACCTGCGGCAGCACTACG
TACAGCTACACGGGCCTCGAAGGCTACGGCTTCGTGCCCTCCAACGCCAC
AGACAAATATGGCGACACAATGGGCGGCTTTGGCAGTTCCGCTGCCTTTG
ACCTCTCCACCTGGCAACGAACCAGCCCCAATACTTACACCGGCATCATC
TACTGTCTCCCAGATCGCGGCTGGAACACCAACGGCACCCTCAACTTCCA
ACCACGCATCCACACGTTCAACCTCACCCTCCAACTATCCCCCAATGCAT
CCGCCACCCACCCATCCCCACCCAACATCCACCTGCACTACCTCGACACC
CTCCTCCTCACCGGCCCCGACAACGCACCCCTCACCGGCCTCGACGCTAT
CACCACCACCACCAACACAACTACCACAACCACCAAGTACCCCAACTTCC
CCCCTCTCCCAATAGCCACCTACCCCGGCGACGGCTTCGGCGGCCCGGGC
CCAGGCGGACACCGCATCCCCCTCGACGCCGAAGGGCTCGCCTTACCAGC
CCACGACCCAGCGCACATCTGGGTGTCAGATGAATACGGACCCTACGTAT
ACAAATTCGACAAGCGGACCGGCCGCATGGTCTACGCCATTCAACCGCCC
CAGGCGTATCTCCCTCGGAGGAATAACACACTCAGCTTCAGCGCGGATAG
TCCGCCTATCTATGATGCGGAGCTTGTACCCATCCCTGAAGATCCCTCAA
CAGGGAGGGATAATAATCAGGGATTCGAGGGATTGACTATCTCATCTGAT
GGGAAGAAGTTGTATACTTTGCTACAATCCGCATTGAATCAGGAGGGTGG
GCTGAAGAAGAAATACCGCGATCAGGCTCGGTTACTGCAGTATGATATTT
CGAATTCCTCCGGAGTAGACGCTGTCTATGAAGCGGAGTATGTGGTAACC
CTCCCGAAATACTACAATCCCGAGAAAGGTCACGATATCGTCGCCGCACA
ATCGGAGATTCATCTCCTCCCGACAGGTGACTTCCTCGTATTAGCGAGAG
ACTCTGGGTTCGGACATGGACAGAGTGATTCTCTGTCCGTGTATCGACAT
GCTGATATCTTTCACATCTCAACTAATACTACGACGGACCTGAAGAACCT
GAGGGGTGTGGATGCCCCTAATGGAACCATCGCCTCTGATAAAGGTATCC
TACATGATGGTATCACATCCGCAGAGTACTGCCCCTTTCTGGATTATAAT
GTCCCAGGGCAATTGGCGAAGTTTGGTTTGCATAATGGTGGAGAGCAGGA
TGAGTGGCTGTTGAATGAGAAGTGGGAGAGTTTGGCCCTTGTTCCGGTGA
ATCCCGATACGGAGGATAGCAGTACTAATAGCGGTGGGGAGAAGGAGTAT
TTCTTGTTCAGTATTAGTGATAATGATTTTATTACGCAGGATGGGTACAT
GAATTTCGGTCGGTTCAGGTATGCAGACGGCTCGGGGTATAATCTTGATA
ACCAGGTGTTGGCGTTTAGAGTTCGTTTCTAGATGATTGGATCTAAACAC
AATTCATCCATCCGCAATATGCGAGTCCACTCTCTCCTCCCCATGCTGCC
CTCTGCAGTGGCAGCCCTTCCCTCTTCCTCTTTTGCTTCTTTCTCCAACA
TCGTCAACCAAACCACCTGCGGCAGCACTACGTACAGCTACACGGGCCTC
GAAGGCTACGGCTTCGTGCCCTCCAACGCCACAGACAAATATGGCGACAC
AATGGGCGGCTTTGGCAGTTCCGCTGCCTTTGACCTCTCCACCTGGCAAC
GAACCAGCCCCAATACTTACACCGGCATCATCTACTGTCTCCCAGATCGC
GGCTGGAACACCAACGGCACCCTCAACTTCCAACCACGCATCCACACGTT
CAACCTCACCCTCCAACTATCCCCCAATGCATCCGCCACCCACCCATCCC
CACCCAACATCCACCTGCACTACCTCGACACCCTCCTCCTCACCGGCCCC
GACAACGCACCCCTCACCGGCCTCGACGCTATCACCACCACCACCAACAC
AACTACCACAACCACCAAGTACCCCAACTTCCCCCCTCTCCCAATAGCCA
CCTACCCCGGCGACGGCTTCGGCGGCCCGGGCCCAGGCGGACACCGCATC
CCCCTCGACGCCGAAGGGCTCGCCTTACCAGCCCACGACCCAGCGCACAT
CTGGGTGTCAGATGAATACGGACCCTACGTATACAAATTCGACAAGCGGA
CCGGCCGCATGGTCTACGCCATTCAACCGCCCCAGGCGTATCTCCCTCGG
AGGAATAACACACTCAGCTTCAGCGCGGATAGTCCGCCTATCTATGATGC
GGAGCTTGTACCCATCCCTGAAGATCCCTCAACAGGGAGGGATAATAATC
AGGGATTCGAGGGATTGACTATCTCATCTGATGGGAAGAAGTTGTATACT
TTGCTACAATCCGCATTGAATCAGGAGGGTGGGCTGAAGAAGAAATACCG
CGATCAGGCTCGGTTACTGCAGTATGATATTTCGAATTCCTCCGGAGTAG
ACGCTGTCTATGAAGCGGAGTATGTGGTAACCCTCCCGAAATACTACAAT
CCCGAGAAAGGTCACGATATCGTCGCCGCACAATCGGAGATTCATCTCCT
CCCGACAGGTGACTTCCTCGTATTAGCGAGAGACTCTGGGTTCGGACATG
GACAGAGTGATTCTCTGTCCGTGTATCGACATGCTGATATCTTTCACATC
TCAACTAATACTACGACGGACCTGAAGAACCTGAGGGGTGTGGATGCCCC
TAATGGAACCATCGCCTCTGATAAAGGTATCCTACATGATGGTATCACAT
CCGCAGAGTACTGCCCCTTTCTGGATTATAATGTCCCAGGGCAATTGGCG
AAGTTTGGTTTGCATAATGGTGGAGAGCAGGATGAGTGGCTGTTGAATGA
GAAGTGGGAGAGTTTGGCCCTTGTTCCGGTGAATCCCGATACGGAGGATA
GCAGTACTAATAGCGGTGGGGAGAAGGAGTATTTCTTGTTCAGTATTAGT
GATAATGATTTTATTACGCAGGATGGGTACATGAATTTCGGTCGGTTCAG
GTATGCAGACGGCTCGGGGTATAATCTTGATAACCAGGTGTTGGCGTTTA
GAGTTCGTTTCTAGATGATTGGATCTAAACACAATTCATCCATCCGCAAT
ATGCGAGTCCACTCTCTCCTCCCCATGCTGCCCTCTGCAGTGGCAGCCCT
TCCCTCTTCCTCTTTTGCTTCTTTCTCCAACATCGTCAACCAAACCACCT
GCGGCAGCACTACGTACAGCTACACGGGCCTCGAAGGCTACGGCTTCGTG
CCCTCCAACGCCACAGACAAATATGGCGACACAATGGGCGGCTTTGGCAG
TTCCGCTGCCTTTGACCTCTCCACCTGGCAACGAACCAGCCCCAATACTT
ACACCGGCATCATCTACTGTCTCCCAGATCGCGGCTGGAACACCAACGGC
ACCCTCAACTTCCAACCACGCATCCACACGTTCAACCTCACCCTCCAACT
ATCCCCCAATGCATCCGCCACCCACCCATCCCCACCCAACATCCACCTGC
ACTACCTCGACACCCTCCTCCTCACCGGCCCCGACAACGCACCCCTCACC
GGCCTCGACGCTATCACCACCACCACCAACACAACTACCACAACCACCAA
GTACCCCAACTTCCCCCCTCTCCCAATAGCCACCTACCCCGGCGACGGCT
TCGGCGGCCCGGGCCCAGGCGGACACCGCATCCCCCTCGACGCCGAAGGG
CTCGCCTTACCAGCCCACGACCCAGCGCACATCTGGGTGTCAGATGAATA
CGGACCCTACGTATACAAATTCGACAAGCGGACCGGCCGCATGGTCTACG
CCATTCAACCGCCCCAGGCGTATCTCCCTCGGAGGAATAACACACTCAGC
TTCAGCGCGGATAGTCCGCCTATCTATGATGCGGAGCTTGTACCCATCCC
TGAAGATCCCTCAACAGGGAGGGATAATAATCAGGGATTCGAGGGATTGA
CTATCTCATCTGATGGGAAGAAGTTGTATACTTTGCTACAATCCGCATTG
AATCAGGAGGGTGGGCTGAAGAAGAAATACCGCGATCAGGCTCGGTTACT
GCAGTATGATATTTCGAATTCCTCCGGAGTAGACGCTGTCTATGAAGCGG
AGTATGTGGTAACCCTCCCGAAATACTACAATCCCGAGAAAGGTCACGAT
ATCGTCGCCGCACAATCGGAGATTCATCTCCTCCCGACAGGTGACTTCCT
CGTATTAGCGAGAGACTCTGGGTTCGGACATGGACAGAGTGATTCTCTGT
CCGTGTATCGACATGCTGATATCTTTCACATCTCAACTAATACTACGACG
GACCTGAAGAACCTGAGGGGTGTGGATGCCCCTAATGGAACCATCGCCTC
TGATAAAGGTATCCTACATGATGGTATCACATCCGCAGAGTACTGCCCCT
TTCTGGATTATAATGTCCCAGGGCAATTGGCGAAGTTTGGTTTGCATAAT
GGTGGAGAGCAGGATGAGTGGCTGTTGAATGAGAAGTGGGAGAGTTTGGC
CCTTGTTCCGGTGAATCCCGATACGGAGGATAGCAGTACTAATAGCGGTG
GGGAGAAGGAGTATTTCTTGTTCAGTATTAGTGATAATGATTTTATTACG
CAGGATGGGTACATGAATTTCGGTCGGTTCAGGTATGCAGACGGCTCGGG
GTATAATCTTGATAACCAGGTGTTGGCGTTTAGAGTTCGTTTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007526-T1.utr5p1 | KJC3_007526-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007526-T1.utr3p1 | KJC3_007526-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027372 |
| DBxref | PFAM:PF13449 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2710453..2712501 + |
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