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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2732732..2734821+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007535-T1 ID=KJC3_007535-T1|Name=KJC3_007535-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2090bp|location=Sequence derived from alignment at ch5:2732732..2734821+ (Aspergillus niger KJC3)
CAATGAGAAAATGGAATACCCCAAGACACGCTCTCATATTTCTGAACTAT
TTATCCCTCAGATTACTACTTCCAAGACCGTTGAGCATGCTACCCACCTT
GCCCTGATTAATACCACAAAGACCAAATATATCACTGCTATACGGAGCTG
GACATCTTTAGGGGTCCTCCTTCTCGCGCCAGGAGAGCTTGACGCGCGCC
ACCATCTCTGCCGTGATGCCACCCCCGGATTGTTCGCGGCGACAGATTGC
ACCGAAAGCAGATGGCTGTAGAGCCGATCTTGGAAACGTACCGATCACAC
TAGACGAGCTCGAAATCGATTCCTACTTCGCATCGTGCCCTCGTACCGAA
GGTTGATATGCATATGTCCTTGAACCTATTAACTGAGACCTATCCACTCA
CTCATCATGACACACAGGCCCAAGCTCTACTCAAGAGAGCGTGATTGTCA
CGTGGAACGGAGAGGATGACCCCAAAGATCCATACAACTGGCCCCTTTCG
AAGAAATGGCGCGCCACGGGCATTGGCTTGCTTGCGAGCTTTGTCTGCTC
GATGAATGGGACCATCCTAACGGTGGCTCACACGGCCATTGGGGACGAAT
TTCACATTTCTGATGCGACGTTCCCCAATACCTACTGGCTAACAACATCT
TGGGGTATCGGGGCCGCGCTTTGCCCGCTTCTTCTGTTTCCTGTAATGGA
GGACTTTGGCGTTCGACCTGTCCTTCTGACCACCTATTTTTGCTTTATTT
CTTTTTTGATTCCTGTGGGGCTGGCACCAAACTTTGCCACCCTGATTGTG
GTTCGATTCTTCAGCGGGGGATGTGTTCCGCTGATAAGCGACGCCGTTGC
CGGTATTACATCGAATGTCTTTCACGGCGATCGAGCTCGGAGTGTCCCAA
TTTGTCTGTACGTGACCATCTATCTGGCGGCGACAAGTCTGGGCCCGGTG
GTTGGCTCTGCCATCCTGCAATTCCTGTCATGGCGCTGGATTGCGTACAT
CGAACTGATCTGGACCGCTGCCCTATATCCGATTCTGATCTTCGGTCTGC
CAGAGAGCCGCGGGCCGGCGATCTTGCGCGCTAAGGCCAAACGACTGCGC
CGCGAGGGGACGAACGCGTACACGACCGAGAAGATCGATCGGGTAGCATT
GCCTCAGCTTATCCTGCAGAGCGTTCAACGGCCTCTGTACATGCTATGTA
CTGAAGGGGTCGTGTTCGTTGCGACGGTGTGGGCTGCCTTCAGCTTGGGA
ACAATCTATCTTTTTACGCAATCAGTCGAGCAGGTATACAAGGAGCTATA
TAGGTGGGATCCCATCCAGTGTGGATATGTCCAAGTTGCGATTGTGATCG
GGGAACTTCTGGGCGGTGGATTTTGCATCTTAACCGATCCCTGGTACTAT
GCATCTGCGACCCGCAATACCGAGGCACCGGGCACGCCGATCCCGGAGGC
TCGGCTTCATGCATCGATTATTGGTGGACTCTTTGGTGTCACGAGCGGCA
TGTTCGTGTATGGGTGGACATCGTACACTTCCATACACTGGATGGCACCC
ACCGTCGGCCTGGCGATGGTGGGGTTTGAGACGACGGCGGTCATCGTTGG
CAATGCCAACTATCTCATCGACGCGTACAGCAAGTATGCTGCGAGCGCCC
TCGGGGCGGTGGGTTTCGTCGAGAACATCTCTATCGCCTTTCTCCCTCTG
GCCGCAGCAGCCATGTACACGAATATCGGGTTTCAGTGGGCCAGCTCGCT
GCTTGCATTTGTGTCCTTGGCCCTGGTGGCGACTCCTTTTGTGGTCCTCC
AATGGGGCAAAGAAATCAGATCTTACAGCCCATTCATGCAGGAGGCCACT
GTAGAGCGGAGGAGAGACTGTGCCGCGGCCGCAGGTGTATAGACAGCAAG
GGCCTTCAGGTGCTGTCCTCTGCGCAGCGCCCCCTCTTAGATTAATAAAC
ATTAGATTACGTGAATCTTTCTAAAGATTCCTATGATATGAATAATTGTC
GGACTAAACTGGCTAGTTAGCCGGAGTTGGCCAGTTAACCGATAGATAGA
TGTATATTTATACATTTATTGTTCAGGTCTAGCTAGCTAG back to topCoding sequence (CDS) from alignment at ch5:2732732..2734821+ >KJC3_007535-T1 ID=KJC3_007535-T1|Name=KJC3_007535-T1|organism=Aspergillus niger KJC3|type=CDS|length=1341bp|location=Sequence derived from alignment at ch5:2732732..2734821+ (Aspergillus niger KJC3)
ATGAATGGGACCATCCTAACGGTGGCTCACACGGCCATTGGGGACGAATT
TCACATTTCTGATGCGACGTTCCCCAATACCTACTGGCTAACAACATCTT
GGGGTATCGGGGCCGCGCTTTGCCCGCTTCTTCTGTTTCCTGTAATGGAG
GACTTTGGCGTTCGACCTGTCCTTCTGACCACCTATTTTTGCTTTATTTC
TTTTTTGATTCCTGTGGGGCTGGCACCAAACTTTGCCACCCTGATTGTGG
TTCGATTCTTCAGCGGGGGATGTGTTCCGCTGATAAGCGACGCCGTTGCC
GGTATTACATCGAATGTCTTTCACGGCGATCGAGCTCGGAGTGTCCCAAT
TTGTCTGTACGTGACCATCTATCTGGCGGCGACAAGTCTGGGCCCGGTGG
TTGGCTCTGCCATCCTGCAATTCCTGTCATGGCGCTGGATTGCGTACATC
GAACTGATCTGGACCGCTGCCCTATATCCGATTCTGATCTTCGGTCTGCC
AGAGAGCCGCGGGCCGGCGATCTTGCGCGCTAAGGCCAAACGACTGCGCC
GCGAGGGGACGAACGCGTACACGACCGAGAAGATCGATCGGGTAGCATTG
CCTCAGCTTATCCTGCAGAGCGTTCAACGGCCTCTGTACATGCTATGTAC
TGAAGGGGTCGTGTTCGTTGCGACGGTGTGGGCTGCCTTCAGCTTGGGAA
CAATCTATCTTTTTACGCAATCAGTCGAGCAGGTATACAAGGAGCTATAT
AGGTGGGATCCCATCCAGTGTGGATATGTCCAAGTTGCGATTGTGATCGG
GGAACTTCTGGGCGGTGGATTTTGCATCTTAACCGATCCCTGGTACTATG
CATCTGCGACCCGCAATACCGAGGCACCGGGCACGCCGATCCCGGAGGCT
CGGCTTCATGCATCGATTATTGGTGGACTCTTTGGTGTCACGAGCGGCAT
GTTCGTGTATGGGTGGACATCGTACACTTCCATACACTGGATGGCACCCA
CCGTCGGCCTGGCGATGGTGGGGTTTGAGACGACGGCGGTCATCGTTGGC
AATGCCAACTATCTCATCGACGCGTACAGCAAGTATGCTGCGAGCGCCCT
CGGGGCGGTGGGTTTCGTCGAGAACATCTCTATCGCCTTTCTCCCTCTGG
CCGCAGCAGCCATGTACACGAATATCGGGTTTCAGTGGGCCAGCTCGCTG
CTTGCATTTGTGTCCTTGGCCCTGGTGGCGACTCCTTTTGTGGTCCTCCA
ATGGGGCAAAGAAATCAGATCTTACAGCCCATTCATGCAGGAGGCCACTG
TAGAGCGGAGGAGAGACTGTGCCGCGGCCGCAGGTGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007535-T1.utr5p1 | KJC3_007535-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007535-T1.utr3p1 | KJC3_007535-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2732732..2734821 + |
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