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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2744497..2747350- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007540-T1 ID=KJC3_007540-T1|Name=KJC3_007540-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2854bp|location=Sequence derived from alignment at ch5:2744497..2747350- (Aspergillus niger KJC3)
CGCTAGTTCACTGATCATCCCGCTCTTTCCCTTTTCAGCACCCACTTATG
CATCCATATGACGGAGCTGAGAGGCTAGATAGTAGATATCTCAGATTCTG
GGATTGCGAGCTAAGCAATCTCTTTTCTTTTTGCTTGAGGGGCCAATGAG
ATGCACTGGGAGCCGCAGCCTCCATTTTCTGTGGCGCATGTCCCTCTTCA
GCTAGCCTTCCTGTGGAATCTCGACATCAGGTCTGAAATCCGGCAGTTGT
AACTGGGGTTTCCTGCTATTAAGTGTTGCGACTCAATCCTCCAAATAGAG
GGTGACAGTGAAGAAAATAATAAAGAAATCCCAAGTCACATTCTCAACGT
TACCTAATGGATCCTATATCTGCCTTGAGCGTGGCATGCGCTGTTTTTCA
GTTTGCCGACCTCGGCGCCAAAATTCTGACGAAAGGGCGTGAGCTCTACC
AGTCTCACTCAGGGGCTTTAGACAGGCACGCTGAGCTCGAGAAATGCGCT
GAGCAGTTGAGCGCCTTGGTCAATGAATATTCCAAGGGGGCAAATGCGCT
TCCTGAAGCCCTGGGGAAAGGTATGGAGGATATCATCGATGAGTGCAATT
TGACTGCTGGGTTATTGTCAAGTCTATTGAATGGCTTGAAAATTCCAGAG
AAGTCTAAGGGTATCTTGAGGGTATTTAGAGCCGGGCGACAGGCGGTCCG
AACGGCGGTCAGACAACCGCAAATCGATGAACTTAATGACAAGATGATGG
ATTTACGGGAGAAGTTACCAGCCTATATGTTGGCAGTACTACAGTAAGAT
TTACCCCTCCAACGAGCTTATATGTTGTAGTTGGGCTGATGGGCCTTGTA
AGAAATCAATCATCTGCGACACAAGAGACGCTCAAGAAGCTTTCGTCAGA
TAGCGCACAAAGGGAAAACAATATTGCATCCCAGCTGAACGACATGAGAA
GGGAGATGCTCAGTATTCTCCAAAAGCCAGATAGCTCGCTCTTTCTTGCC
TCAGATCTTGAGAAGCTTGTCCCAGTCCTTTCCAACCTAGTGGACGAAAG
CCGAGCAGTGACTTGCAAAACTGAGATCCTGTCGAGCCTTTACTTCCCGG
AGATGAAGGAAAGATATGATCAAATCAGAGACTCAGAATACTCCTTTGAG
TGGATTCTTGGGTCAGGCAGATGCAACGATACATCGGTACCCAGGGTGTA
CTTTGTGGATTGGTTACATAGCCAGAAGGCAAACGATAACACATACTGGA
TAAGTGGGAAACCAGGTTCTGGGAAATCGACTCTAATGAAGTTCTTATAC
AATCACGATCAGACACGAGCAATTCTCAAAGAGTGGGCTGGCCAGCAAAA
GCTTGTCATCAGTGGGTTTTACTTCTGGATATCTGGCGGATCACGGCTAC
TGAAGTCCCAGCTAGGCCTTCTCCGATCACTCGTTTTCGAAGTGTTCTGG
CATATGCCAGAGGTTATCGAGTACGCGTGTCCGGAAAGATACGCTAATGG
TCTCAAGCCGATGCAATATGGCTCGCTAGCATGGACACTCAATGAGCTAC
TAGAAGCTCTAAAAAGAGCCACAACAAATGCTCAGAGTAACACCCGCTTC
TGCTTCTTCATTGATGGACTGGATGAGTGTGACGGTTATCCTCAGGCAAT
GGTTGACCTAATCCGAGACCGCTTTCCAAAGTCGCCGGACATAAAATTCT
GCCTTGCCAGTCGAAAGTGGAATGCTTTCATCGACGAGTATGGTGACGTA
CTAGGAGAAAGGGAGATCCCCAGACATCTCTATCTAGAAGATTTGACACA
AACAGATATCCGAAGATACGTTCAACGGCGACTCCAAGCCCAGCGGCGCT
TCCAGCAATGGCATAGGGAGGACCCTGTTTCGAGCAAAAGACTCATTGAA
GACGTCGTTAAAAAGGCGGAAGGAGTGTTTCTTTGGGTCACTCTTGTGGT
CGAGTCTCTTATAAGAGGGGTGCAGAACAAAGATCATCTGGCCACACTGC
AAGACAGGCTGGATAAAATCCCCAGTGAACTGCCGGATTACTTCGCCCAC
ATGCTGTGTAACGTTGAGGAAATATATAAGGTGGACGCAGCTAAGATATA
TCAAATCATGCTGAATACGACAGAGCAACCATATCTTCTCCTATTCTCGT
ACCTGTGGGAGCGTGATCCACAATTTGGGACCGTCATGGAAACCAAGCCA
TTCTCATTACGCGACATAAGCAGGATGAATGATGATTTACGTGTTCGACT
TAATGCACGCTGTACCGACTTGCTTGACATTGTCGAAGTCCCCAGGGTCC
ACCCCATGTGGAAATACAAAGTGGCTTTCTTGCATCGGACAGTGCGTGAT
TACATGAGAAGTGCGGAAGCACAGGAGATTCTGGGAAAGTGGCTCAGCCA
ATCCAAGGCTCATACAAGCTTCAACCCAGATGCGTATATCTGCCAATCGG
CTGTAGCGCATATTAAACGTGCCCCACGGAAACCGCAGTATCTCTCTGAA
CAGGGACGTGCCAGTCAGCTCGTGAATCAGTTCGCTTACTCCGCCAAGAG
AATTCAAAAATCATTGGGAGACCCTCAGATCGAACTTATGAACTCATTGG
AAACAACACTACATGACTATCGCCAGTCACAACGTCTCCATGCAACTACT
TACCATACATCCTTCTGGTATAGCAAAGCGAGCTTCCTTCAATGGGCGGA
GAAAGAACAATTAGACCTATATGTCTCGTATAGACTTAGCAAGGATCCGG
CCGGAGAAGAGGATCTAAATGAACCAAGATTACTAAGACGAAGGCAGACC
TTTGACGAGCCTGAACCAAAGAACAACCGAACAAAGTCTCAGCGGAGAAT
GTAA back to topCoding sequence (CDS) from alignment at ch5:2744497..2747350- >KJC3_007540-T1 ID=KJC3_007540-T1|Name=KJC3_007540-T1|organism=Aspergillus niger KJC3|type=CDS|length=4878bp|location=Sequence derived from alignment at ch5:2744497..2747350- (Aspergillus niger KJC3)
AAATCAATCATCTGCGACACAAGAGACGCTCAAGAAGCTTTCGTCAGATA
GCGCACAAAGGGAAAACAATATTGCATCCCAGCTGAACGACATGAGAAGG
GAGATGCTCAGTATTCTCCAAAAGCCAGATAGCTCGCTCTTTCTTGCCTC
AGATCTTGAGAAGCTTGTCCCAGTCCTTTCCAACCTAGTGGACGAAAGCC
GAGCAGTGACTTGCAAAACTGAGATCCTGTCGAGCCTTTACTTCCCGGAG
ATGAAGGAAAGATATGATCAAATCAGAGACTCAGAATACTCCTTTGAGTG
GATTCTTGGGTCAGGCAGATGCAACGATACATCGGTACCCAGGGTGTACT
TTGTGGATTGGTTACATAGCCAGAAGGCAAACGATAACACATACTGGATA
AGTGGGAAACCAGGTTCTGGGAAATCGACTCTAATGAAGTTCTTATACAA
TCACGATCAGACACGAGCAATTCTCAAAGAGTGGGCTGGCCAGCAAAAGC
TTGTCATCAGTGGGTTTTACTTCTGGATATCTGGCGGATCACGGCTACTG
AAGTCCCAGCTAGGCCTTCTCCGATCACTCGTTTTCGAAGTGTTCTGGCA
TATGCCAGAGGTTATCGAGTACGCGTGTCCGGAAAGATACGCTAATGGTC
TCAAGCCGATGCAATATGGCTCGCTAGCATGGACACTCAATGAGCTACTA
GAAGCTCTAAAAAGAGCCACAACAAATGCTCAGAGTAACACCCGCTTCTG
CTTCTTCATTGATGGACTGGATGAGTGTGACGGTTATCCTCAGGCAATGG
TTGACCTAATCCGAGACCGCTTTCCAAAGTCGCCGGACATAAAATTCTGC
CTTGCCAGTCGAAAGTGGAATGCTTTCATCGACGAGTATGGTGACGTACT
AGGAGAAAGGGAGATCCCCAGACATCTCTATCTAGAAGATTTGACACAAA
CAGATATCCGAAGATACGTTCAACGGCGACTCCAAGCCCAGCGGCGCTTC
CAGCAATGGCATAGGGAGGACCCTGTTTCGAGCAAAAGACTCATTGAAGA
CGTCGTTAAAAAGGCGGAAGGAGTGTTTCTTTGGGTCACTCTTGTGGTCG
AGTCTCTTATAAGAGGGGTGCAGAACAAAGATCATCTGGCCACACTGCAA
GACAGGCTGGATAAAATCCCCAGTGAACTGCCGGATTACTTCGCCCACAT
GCTGTGTAACGTTGAGGAAATATATAAGGTGGACGCAGCTAAGATATATC
AAATCATGCTGAATACGACAGAGCAACCATATCTTCTCCTATTCTCGTAC
CTGTGGGAGCGTGATCCACAATTTGGGACCGTCATGGAAACCAAGCCATT
CTCATTACGCGACATAAGCAGGATGAATGATGATTTACGTGTTCGACTTA
ATGCACGCTGTACCGACTTGCTTGACATTGTCGAAGTCCCCAGGGTCCAC
CCCATGTGGAAATACAAAGTGGCTTTCTTGCATCGGACAGTGCGTGATTA
CATGAGAAGTGCGGAAGCACAGGAGATTCTGGGAAAGTGGCTCAGCCAAT
CCAAGGCTCATACAAGCTTCAACCCAGATGCGTATATCTGCCAATCGGCT
GTAGCGCATATTAAACGTGCCCCACGGAAACCGCAGTATCTCTCTGAACA
GGGACGTGCCAGTCAGCTCGTGAATCAGTTCGCTTACTCCGCCAAGAGAA
TTCAAAAATCATTGGGAGACCCTCAGATCGAACTTATGAACTCATTGGAA
ACAACACTACATGACTATCGCCAGTCACAACGTCTCCATGCAACTACTTA
CCATACATCCTTCTGGTATAGCAAAGCGAGCTTCCTTCAATGGGCGGAGA
AAGAACAATTAGACCTATATGTCTCGTATAGACTTAGCAAGGATCCGGCC
GGAGAAGAGGATCTAAATGAACCAAGATTACTAAGACGAAGGCAGACCTT
TGACGAGCCTGAACCAAAGAACAACCGAACAAAGTCTCAGCGGAGAATGT
AAATGGATCCTATATCTGCCTTGAGCGTGGCATGCGCTGTTTTTCAGTTT
GCCGACCTCGGCGCCAAAATTCTGACGAAAGGGCGTGAGCTCTACCAGTC
TCACTCAGGGGCTTTAGACAGGCACGCTGAGCTCGAGAAATGCGCTGAGC
AGTTGAGCGCCTTGGTCAATGAATATTCCAAGGGGGCAAATGCGCTTCCT
GAAGCCCTGGGGAAAGGTATGGAGGATATCATCGATGAGTGCAATTTGAC
TGCTGGGTTATTGTCAAGTCTATTGAATGGCTTGAAAATTCCAGAGAAGT
CTAAGGGTATCTTGAGGGTATTTAGAGCCGGGCGACAGGCGGTCCGAACG
GCGGTCAGACAACCGCAAATCGATGAACTTAATGACAAGATGATGGATTT
ACGGGAGAAGTTACCAGCCTATATGTTGGCAGTACTACAAAATCAATCAT
CTGCGACACAAGAGACGCTCAAGAAGCTTTCGTCAGATAGCGCACAAAGG
GAAAACAATATTGCATCCCAGCTGAACGACATGAGAAGGGAGATGCTCAG
TATTCTCCAAAAGCCAGATAGCTCGCTCTTTCTTGCCTCAGATCTTGAGA
AGCTTGTCCCAGTCCTTTCCAACCTAGTGGACGAAAGCCGAGCAGTGACT
TGCAAAACTGAGATCCTGTCGAGCCTTTACTTCCCGGAGATGAAGGAAAG
ATATGATCAAATCAGAGACTCAGAATACTCCTTTGAGTGGATTCTTGGGT
CAGGCAGATGCAACGATACATCGGTACCCAGGGTGTACTTTGTGGATTGG
TTACATAGCCAGAAGGCAAACGATAACACATACTGGATAAGTGGGAAACC
AGGTTCTGGGAAATCGACTCTAATGAAGTTCTTATACAATCACGATCAGA
CACGAGCAATTCTCAAAGAGTGGGCTGGCCAGCAAAAGCTTGTCATCAGT
GGGTTTTACTTCTGGATATCTGGCGGATCACGGCTACTGAAGTCCCAGCT
AGGCCTTCTCCGATCACTCGTTTTCGAAGTGTTCTGGCATATGCCAGAGG
TTATCGAGTACGCGTGTCCGGAAAGATACGCTAATGGTCTCAAGCCGATG
CAATATGGCTCGCTAGCATGGACACTCAATGAGCTACTAGAAGCTCTAAA
AAGAGCCACAACAAATGCTCAGAGTAACACCCGCTTCTGCTTCTTCATTG
ATGGACTGGATGAGTGTGACGGTTATCCTCAGGCAATGGTTGACCTAATC
CGAGACCGCTTTCCAAAGTCGCCGGACATAAAATTCTGCCTTGCCAGTCG
AAAGTGGAATGCTTTCATCGACGAGTATGGTGACGTACTAGGAGAAAGGG
AGATCCCCAGACATCTCTATCTAGAAGATTTGACACAAACAGATATCCGA
AGATACGTTCAACGGCGACTCCAAGCCCAGCGGCGCTTCCAGCAATGGCA
TAGGGAGGACCCTGTTTCGAGCAAAAGACTCATTGAAGACGTCGTTAAAA
AGGCGGAAGGAGTGTTTCTTTGGGTCACTCTTGTGGTCGAGTCTCTTATA
AGAGGGGTGCAGAACAAAGATCATCTGGCCACACTGCAAGACAGGCTGGA
TAAAATCCCCAGTGAACTGCCGGATTACTTCGCCCACATGCTGTGTAACG
TTGAGGAAATATATAAGGTGGACGCAGCTAAGATATATCAAATCATGCTG
AATACGACAGAGCAACCATATCTTCTCCTATTCTCGTACCTGTGGGAGCG
TGATCCACAATTTGGGACCGTCATGGAAACCAAGCCATTCTCATTACGCG
ACATAAGCAGGATGAATGATGATTTACGTGTTCGACTTAATGCACGCTGT
ACCGACTTGCTTGACATTGTCGAAGTCCCCAGGGTCCACCCCATGTGGAA
ATACAAAGTGGCTTTCTTGCATCGGACAGTGCGTGATTACATGAGAAGTG
CGGAAGCACAGGAGATTCTGGGAAAGTGGCTCAGCCAATCCAAGGCTCAT
ACAAGCTTCAACCCAGATGCGTATATCTGCCAATCGGCTGTAGCGCATAT
TAAACGTGCCCCACGGAAACCGCAGTATCTCTCTGAACAGGGACGTGCCA
GTCAGCTCGTGAATCAGTTCGCTTACTCCGCCAAGAGAATTCAAAAATCA
TTGGGAGACCCTCAGATCGAACTTATGAACTCATTGGAAACAACACTACA
TGACTATCGCCAGTCACAACGTCTCCATGCAACTACTTACCATACATCCT
TCTGGTATAGCAAAGCGAGCTTCCTTCAATGGGCGGAGAAAGAACAATTA
GACCTATATGTCTCGTATAGACTTAGCAAGGATCCGGCCGGAGAAGAGGA
TCTAAATGAACCAAGATTACTAAGACGAAGGCAGACCTTTGACGAGCCTG
AACCAAAGAACAACCGAACAAAGTCTCAGCGGAGAATGTAAATGGATCCT
ATATCTGCCTTGAGCGTGGCATGCGCTGTTTTTCAGTTTGCCGACCTCGG
CGCCAAAATTCTGACGAAAGGGCGTGAGCTCTACCAGTCTCACTCAGGGG
CTTTAGACAGGCACGCTGAGCTCGAGAAATGCGCTGAGCAGTTGAGCGCC
TTGGTCAATGAATATTCCAAGGGGGCAAATGCGCTTCCTGAAGCCCTGGG
GAAAGGTATGGAGGATATCATCGATGAGTGCAATTTGACTGCTGGGTTAT
TGTCAAGTCTATTGAATGGCTTGAAAATTCCAGAGAAGTCTAAGGGTATC
TTGAGGGTATTTAGAGCCGGGCGACAGGCGGTCCGAACGGCGGTCAGACA
ACCGCAAATCGATGAACTTAATGACAAGATGATGGATTTACGGGAGAAGT
TACCAGCCTATATGTTGGCAGTACTACA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007540-T1.utr5p1 | KJC3_007540-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2744497..2747350 - |
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