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KJC3_007594-T1, KJC3_007594-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007594-T1
Unique NameKJC3_007594-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2884177..2885618+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007594-T1 ID=KJC3_007594-T1|Name=KJC3_007594-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1442bp|location=Sequence derived from alignment at ch5:2884177..2885618+ (Aspergillus niger KJC3)
CCAGAACAGTAGTCACTACGACCGTTGGAGCTAAACGCTTTCTGCTACCC
ACGCATCTACGTCTCAGGCAAAGGGCCGAACACGTCGTCGCCCGGTTACA
CACTCTCCCCAGCAGTCTTGTGAAGCTTGAGGTCTCCCAGATGGCCCAAA
GATAGAGCCAAAATGTGGGAATACATGCATGCTTCGCGGTTGCACATACC
CTTGAAACGCATGGCCCCAGACTGCCTCAACCATTTAGAGACGATCGGCC
AACGCCTCGACCACCCTGGGAATCTGAAGCTTCCGCTGAAATCTACAGGT
TCACGACAAGCCTGCGCCCCTCCGGCAAAATACTGCAGTTCTATAGAGGG
GAGCTGATCGGGATATTTCACGCGATCAGCTTGGTCCTCAAGCTGGCTCA
CAAAAGCCACGGATCAGCGGCCGTTGCGACGATCCGGGTAACGATGCAGC
TGACCGTCTCGCTAAAGGAGCGGTGGCCAATCCTATCCTACACCGTCTAT
ACCAAATAAGTTAGCACCGACAATCAGCGCCCCGGAATTCCGCAGGCGGG
GTATATGTCCGATATCGTCCTCCGAGTAAACCGCCTCCTCGGCCTATCCA
TCAGCATCATTCCTATCCATCAGCATTACCATCATCTTTATCATCGACAA
CATGACCACCACGCTCGAAGTCTGGGGCCGCCGCGACTCCTCCAACGTTC
AGGCGGTGATGTGGTGCATCGCCGAGCTCAACCTCCCCTACCTGCGCCAC
GACATCGGCCAACGCTTCGGCGGCAACAACACGCCTGAGTTCCTCGCCAT
GAACCCGAACGGCCGCATCCCTGTCCTCCGCGATGGCGCCAGCGAGCCCT
TATGGGAAAGCGGCGCCATCAACCGGTACCTGGCATCCGCTTACGGGTCC
GACGAGTTCTGGCCCCAGGATCCCCGGGCGCGCGCACAGATCGATAAATG
GGCCGAATGGGCCAAGGTCACCTTCACCCCGGCCTTCTCGCTGCGTATCT
GGTGGCAGCTGGTGCGGGTGGCCCCGTCGAAGCGGGATCCGATCGCGATT
CGCGAGGCAGTCGCCGGGCTCGATCCCATTCTGGATATCGCGGAGGCGCA
GCTGACGCGGCAGAAGTTTCTGGCTGGAGATGTGTTTACCCTTGCGGATG
TGCAGTTCGGGCACCTGCTGTTTCGGTACTTTAGTATTGACATTGAGCGG
AAGGAGAGGCCGGGTCTGCAGAGGTATTATGAGGCGCTGAAGGAGAGGCC
GGCGTATCGGGAGCACGTTATGGTTGATTTTGAGGCGCTTCGCGCCGTTG
ATTAATTGGGGAATAATAATACTATATAAGTACTAAAGTAAATAAATCTC
TAGAAAAGGGCGCTAATATTTTCATAACTACTATTCTCTATTTGGTTACT
CTGCAAGACGAAAGATCAATGTGAAAATGATCTTCGAAACTA
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Coding sequence (CDS) from alignment at ch5:2884177..2885618+

>KJC3_007594-T1 ID=KJC3_007594-T1|Name=KJC3_007594-T1|organism=Aspergillus niger KJC3|type=CDS|length=654bp|location=Sequence derived from alignment at ch5:2884177..2885618+ (Aspergillus niger KJC3)
ATGACCACCACGCTCGAAGTCTGGGGCCGCCGCGACTCCTCCAACGTTCA
GGCGGTGATGTGGTGCATCGCCGAGCTCAACCTCCCCTACCTGCGCCACG
ACATCGGCCAACGCTTCGGCGGCAACAACACGCCTGAGTTCCTCGCCATG
AACCCGAACGGCCGCATCCCTGTCCTCCGCGATGGCGCCAGCGAGCCCTT
ATGGGAAAGCGGCGCCATCAACCGGTACCTGGCATCCGCTTACGGGTCCG
ACGAGTTCTGGCCCCAGGATCCCCGGGCGCGCGCACAGATCGATAAATGG
GCCGAATGGGCCAAGGTCACCTTCACCCCGGCCTTCTCGCTGCGTATCTG
GTGGCAGCTGGTGCGGGTGGCCCCGTCGAAGCGGGATCCGATCGCGATTC
GCGAGGCAGTCGCCGGGCTCGATCCCATTCTGGATATCGCGGAGGCGCAG
CTGACGCGGCAGAAGTTTCTGGCTGGAGATGTGTTTACCCTTGCGGATGT
GCAGTTCGGGCACCTGCTGTTTCGGTACTTTAGTATTGACATTGAGCGGA
AGGAGAGGCCGGGTCTGCAGAGGTATTATGAGGCGCTGAAGGAGAGGCCG
GCGTATCGGGAGCACGTTATGGTTGATTTTGAGGCGCTTCGCGCCGTTGA
TTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007594KJC3_007594Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007594-T1.utr5p1KJC3_007594-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007594-T1.exon1KJC3_007594-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007594-T1.cdsKJC3_007594-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007594-T1.utr3p1KJC3_007594-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007594-T1KJC3_007594-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR036249
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2884177..2885618 +
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