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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2903537..2905705+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007603-T1 ID=KJC3_007603-T1|Name=KJC3_007603-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2169bp|location=Sequence derived from alignment at ch5:2903537..2905705+ (Aspergillus niger KJC3) GGACATTTAGACAACCCACTTAATTCTCATCTCTGCTATGAGGGGTATGA
GTGCATCTATGCGCCATGGCTACGATGACAGAGGAGATTGTCTTGACTGA
AAGGGTGGAAGAGGCCGCTCCAGCATCGAAGATCGATTCCAATGCCCAAG
TTAGAGATGGAGGTTCTCATGAAGAGCAGCCAGTATACCCACATGGATTC
CACTTCGCTCTAATCTCTGCTTCCCTGGTGCTCACTGTGTTCTTGACGGG
ACTGGTAAGTCCATCCTTCCTGATAGAGCACAGCTGGTCTCTAAAAGGTC
TTAGGATGAAACTATCATAACAACTGCAGTGCCCAAAATCACGGATGAAT
TCCACTCCATCGCTGATGTTGGGTGGTATGGGTCTGCGTTGTGAGTCGTA
ACAATCACCATTGCTTAGATTACTCATGTTACCAGCAGCTGACAATATCC
AACAGTCGGCTGGCATCCAGCATGTCCCAGCTTCTTCAAGGCAGAGTATT
CGATCAGTTCTCCGTAAAATGGGCATTTCTACTTCACCTCATCGTTTTTG
AAGCTGGCGCTATCATCTCCGGCGCTGCCCCTTCCTCGCTGGTCTTCATC
ATCGGGCGCGTCATCAGCGGACTTGGCTTTTCGGGTATAAGCCAGGGCTG
CATGGTGTCAGTATTTACATCTCACACAAGTTCACAGTCTAACAAGCAGC
AGGATCATTTCCATGACTAGACCCTTAAACAAACGTCCCATCTACATCGG
AGCCATCAGCGCAAGCGAGTTCTGCGCGACTGCCATCGCCCCTATCATCG
GCGGTGCCATCACTTCCTCCTTATCATGGCGATGGTGTTTCTACCTTAAC
GTGATAGGCTCCATCCTGCCTGCCATTACCACTCTGGTGATATTCAAGAG
CCCCTCGGGCAGGATCACCCATGGCGTAAGCCACGTTCAACGCCTCAAGC
AAATAGATTTCGCCGGAATGGTTCTCTTCGCAGCAGGCCTACTAACCCTT
CTCTTATCGATTCAATGGGGCGGAGACACCTACAGTTGGAGCAATGACCG
CATCATTGCATTGCTAACGATATCACCCATCTTCTTTGTCGTTTTCTTGC
TCGTACAGGTGAAGAAGCAAGACTTCGCTATGCTTCCTTTACGACTCCTA
AAACAGCGCTCAATCCTCTTCGGAGCCCTGTTCAGTCTAGCCCTTCAGGC
CGTGAACGGCATTGCCTCCTACTACGTGAGATCCCCCCTCCACCGTCGTT
CTTACCCATCCACCCACTCACAATTCTCACAGCTCTCCCTCTGGTTCCAA
GTAGTCAGATCCGCTACCCCCCTGCAATCCGGCCTCATGCTCCTCCCAAT
GGTAATATCCATCCTCCTCGCCAGCGTCATCTCCGGCTACGCCATAACAT
ACATAGGATATTACGTGATCTTCATGATCCCTGCCGGACTCATCACCCTG
GCAGGTGCCATCATGACGACCTACTTCGAAAAGGACACCCCAGCCACATT
CTGGATCCCTGCTCTCGCTCTCCTCGGCTTTGGGATCGGCCTGGGAATCT
CCGGACCCTTTCTAGCTGTCCAAGCTATCCTCCCGGAGAAAGACACGTCC
GTCGGACTAGCTATCATGTCTTTCTCGCAGGAGTTTGGCATCGCGCTGTC
CCTGGGTATCGCGCAGTGTTTGTTCTTGAATAAATTGAAGGAGAGTATTG
AAGCTATCACGCCGTATCTGGATCCAGAGAGTGTGATTAATGCGGGGGCA
ACGAGTTTGGTGGGGACCGGGTTGGAGAAGTATGCAAGTCTCATTGCAGA
GGAATATAGTAAGGGGTTGAGGGTCACATTTGTATTTGGGGCGGGGATGG
CGGGCGTGGTGTTTGTTATGGCTTGTTGTATGGAGGTTAGATCGGTCAAG
TAGTTGACTTATATTTGCTGTGGGGGTGGGAGAGTCGAGCTGGAGTGTTC
AGGATTTATACCTGTATATGAATGTCCTAGGTCAAGTCCCATTCACCGCC
GCCAATTTTGGGCCTTTGGCTCTGTTCTAGCGCTTGGAGGGGGTTACAGC
TAATGAGAAATGCATGCATGTCTGGTATACTGATAATACTGTGTACGATA
TCATCACATCCGAACCCTCTGCGCATCAAGGGCATCTATTTCCCCATCAA
CTCACACCCATTCCTCACA back to topCoding sequence (CDS) from alignment at ch5:2903537..2905705+ >KJC3_007603-T1 ID=KJC3_007603-T1|Name=KJC3_007603-T1|organism=Aspergillus niger KJC3|type=CDS|length=8100bp|location=Sequence derived from alignment at ch5:2903537..2905705+ (Aspergillus niger KJC3) ATGGCTACGATGACAGAGGAGATTGTCTTGACTGAAAGGGTGGAAGAGGC CGCTCCAGCATCGAAGATCGATTCCAATGCCCAAGTTAGAGATGGAGGTT CTCATGAAGAGCAGCCAGTATACCCACATGGATTCCACTTCGCTCTAATC TCTGCTTCCCTGGTGCTCACTGTGTTCTTGACGGGACTGGATGAAACTAT CATAACAACTGCAGTGCCCAAAATCACGGATGAATTCCACTCCATCGCTG ATGTTGGGTGGTATGGGTCTGCGTTTCGGCTGGCATCCAGCATGTCCCAG CTTCTTCAAGGCAGAGTATTCGATCAGTTCTCCGTAAAATGGGCATTTCT ACTTCACCTCATCGTTTTTGAAGCTGGCGCTATCATCTCCGGCGCTGCCC CTTCCTCGCTGGTCTTCATCATCGGGCGCGTCATCAGCGGACTTGGCTTT TCGGGTATAAGCCAGGGCTGCATGGTGATCATTTCCATGACTAGACCCTT AAACAAACGTCCCATCTACATCGGAGCCATCAGCGCAAGCGAGTTCTGCG CGACTGCCATCGCCCCTATCATCGGCGGTGCCATCACTTCCTCCTTATCA TGGCGATGGTGTTTCTACCTTAACGTGATAGGCTCCATCCTGCCTGCCAT TACCACTCTGGTGATATTCAAGAGCCCCTCGGGCAGGATCACCCATGGCG TAAGCCACGTTCAACGCCTCAAGCAAATAGATTTCGCCGGAATGGTTCTC TTCGCAGCAGGCCTACTAACCCTTCTCTTATCGATTCAATGGGGCGGAGA CACCTACAGTTGGAGCAATGACCGCATCATTGCATTGCTAACGATATCAC CCATCTTCTTTGTCGTTTTCTTGCTCGTACAGGTGAAGAAGCAAGACTTC GCTATGCTTCCTTTACGACTCCTAAAACAGCGCTCAATCCTCTTCGGAGC CCTGTTCAGTCTAGCCCTTCAGGCCGTGAACGGCATTGCCTCCTACTACC TCTCCCTCTGGTTCCAAGTAGTCAGATCCGCTACCCCCCTGCAATCCGGC CTCATGCTCCTCCCAATGGTAATATCCATCCTCCTCGCCAGCGTCATCTC CGGCTACGCCATAACATACATAGGATATTACGTGATCTTCATGATCCCTG CCGGACTCATCACCCTGGCAGGTGCCATCATGACGACCTACTTCGAAAAG GACACCCCAGCCACATTCTGGATCCCTGCTCTCGCTCTCCTCGGCTTTGG GATCGGCCTGGGAATCTCCGGACCCTTTCTAGCTGTCCAAGCTATCCTCC CGGAGAAAGACACGTCCGTCGGACTAGCTATCATGTCTTTCTCGCAGGAG TTTGGCATCGCGCTGTCCCTGGGTATCGCGCAGTGTTTGTTCTTGAATAA ATTGAAGGAGAGTATTGAAGCTATCACGCCGTATCTGGATCCAGAGAGTG TGATTAATGCGGGGGCAACGAGTTTGGTGGGGACCGGGTTGGAGAAGTAT GCAAGTCTCATTGCAGAGGAATATAGTAAGGGGTTGAGGGTCACATTTGT ATTTGGGGCGGGGATGGCGGGCGTGGTGTTTGTTATGGCTTGTTGTATGG AGGTTAGATCGGTCAAGTAGATGGCTACGATGACAGAGGAGATTGTCTTG ACTGAAAGGGTGGAAGAGGCCGCTCCAGCATCGAAGATCGATTCCAATGC CCAAGTTAGAGATGGAGGTTCTCATGAAGAGCAGCCAGTATACCCACATG GATTCCACTTCGCTCTAATCTCTGCTTCCCTGGTGCTCACTGTGTTCTTG ACGGGACTGGATGAAACTATCATAACAACTGCAGTGCCCAAAATCACGGA TGAATTCCACTCCATCGCTGATGTTGGGTGGTATGGGTCTGCGTTTCGGC TGGCATCCAGCATGTCCCAGCTTCTTCAAGGCAGAGTATTCGATCAGTTC TCCGTAAAATGGGCATTTCTACTTCACCTCATCGTTTTTGAAGCTGGCGC TATCATCTCCGGCGCTGCCCCTTCCTCGCTGGTCTTCATCATCGGGCGCG TCATCAGCGGACTTGGCTTTTCGGGTATAAGCCAGGGCTGCATGGTGATC ATTTCCATGACTAGACCCTTAAACAAACGTCCCATCTACATCGGAGCCAT CAGCGCAAGCGAGTTCTGCGCGACTGCCATCGCCCCTATCATCGGCGGTG CCATCACTTCCTCCTTATCATGGCGATGGTGTTTCTACCTTAACGTGATA GGCTCCATCCTGCCTGCCATTACCACTCTGGTGATATTCAAGAGCCCCTC GGGCAGGATCACCCATGGCGTAAGCCACGTTCAACGCCTCAAGCAAATAG ATTTCGCCGGAATGGTTCTCTTCGCAGCAGGCCTACTAACCCTTCTCTTA TCGATTCAATGGGGCGGAGACACCTACAGTTGGAGCAATGACCGCATCAT TGCATTGCTAACGATATCACCCATCTTCTTTGTCGTTTTCTTGCTCGTAC AGGTGAAGAAGCAAGACTTCGCTATGCTTCCTTTACGACTCCTAAAACAG CGCTCAATCCTCTTCGGAGCCCTGTTCAGTCTAGCCCTTCAGGCCGTGAA CGGCATTGCCTCCTACTACCTCTCCCTCTGGTTCCAAGTAGTCAGATCCG CTACCCCCCTGCAATCCGGCCTCATGCTCCTCCCAATGGTAATATCCATC CTCCTCGCCAGCGTCATCTCCGGCTACGCCATAACATACATAGGATATTA CGTGATCTTCATGATCCCTGCCGGACTCATCACCCTGGCAGGTGCCATCA TGACGACCTACTTCGAAAAGGACACCCCAGCCACATTCTGGATCCCTGCT CTCGCTCTCCTCGGCTTTGGGATCGGCCTGGGAATCTCCGGACCCTTTCT AGCTGTCCAAGCTATCCTCCCGGAGAAAGACACGTCCGTCGGACTAGCTA TCATGTCTTTCTCGCAGGAGTTTGGCATCGCGCTGTCCCTGGGTATCGCG CAGTGTTTGTTCTTGAATAAATTGAAGGAGAGTATTGAAGCTATCACGCC GTATCTGGATCCAGAGAGTGTGATTAATGCGGGGGCAACGAGTTTGGTGG GGACCGGGTTGGAGAAGTATGCAAGTCTCATTGCAGAGGAATATAGTAAG GGGTTGAGGGTCACATTTGTATTTGGGGCGGGGATGGCGGGCGTGGTGTT TGTTATGGCTTGTTGTATGGAGGTTAGATCGGTCAAGTAGATGGCTACGA TGACAGAGGAGATTGTCTTGACTGAAAGGGTGGAAGAGGCCGCTCCAGCA TCGAAGATCGATTCCAATGCCCAAGTTAGAGATGGAGGTTCTCATGAAGA GCAGCCAGTATACCCACATGGATTCCACTTCGCTCTAATCTCTGCTTCCC TGGTGCTCACTGTGTTCTTGACGGGACTGGATGAAACTATCATAACAACT GCAGTGCCCAAAATCACGGATGAATTCCACTCCATCGCTGATGTTGGGTG GTATGGGTCTGCGTTTCGGCTGGCATCCAGCATGTCCCAGCTTCTTCAAG GCAGAGTATTCGATCAGTTCTCCGTAAAATGGGCATTTCTACTTCACCTC ATCGTTTTTGAAGCTGGCGCTATCATCTCCGGCGCTGCCCCTTCCTCGCT GGTCTTCATCATCGGGCGCGTCATCAGCGGACTTGGCTTTTCGGGTATAA GCCAGGGCTGCATGGTGATCATTTCCATGACTAGACCCTTAAACAAACGT CCCATCTACATCGGAGCCATCAGCGCAAGCGAGTTCTGCGCGACTGCCAT CGCCCCTATCATCGGCGGTGCCATCACTTCCTCCTTATCATGGCGATGGT GTTTCTACCTTAACGTGATAGGCTCCATCCTGCCTGCCATTACCACTCTG GTGATATTCAAGAGCCCCTCGGGCAGGATCACCCATGGCGTAAGCCACGT TCAACGCCTCAAGCAAATAGATTTCGCCGGAATGGTTCTCTTCGCAGCAG GCCTACTAACCCTTCTCTTATCGATTCAATGGGGCGGAGACACCTACAGT TGGAGCAATGACCGCATCATTGCATTGCTAACGATATCACCCATCTTCTT TGTCGTTTTCTTGCTCGTACAGGTGAAGAAGCAAGACTTCGCTATGCTTC CTTTACGACTCCTAAAACAGCGCTCAATCCTCTTCGGAGCCCTGTTCAGT CTAGCCCTTCAGGCCGTGAACGGCATTGCCTCCTACTACCTCTCCCTCTG GTTCCAAGTAGTCAGATCCGCTACCCCCCTGCAATCCGGCCTCATGCTCC TCCCAATGGTAATATCCATCCTCCTCGCCAGCGTCATCTCCGGCTACGCC ATAACATACATAGGATATTACGTGATCTTCATGATCCCTGCCGGACTCAT CACCCTGGCAGGTGCCATCATGACGACCTACTTCGAAAAGGACACCCCAG CCACATTCTGGATCCCTGCTCTCGCTCTCCTCGGCTTTGGGATCGGCCTG GGAATCTCCGGACCCTTTCTAGCTGTCCAAGCTATCCTCCCGGAGAAAGA CACGTCCGTCGGACTAGCTATCATGTCTTTCTCGCAGGAGTTTGGCATCG CGCTGTCCCTGGGTATCGCGCAGTGTTTGTTCTTGAATAAATTGAAGGAG AGTATTGAAGCTATCACGCCGTATCTGGATCCAGAGAGTGTGATTAATGC GGGGGCAACGAGTTTGGTGGGGACCGGGTTGGAGAAGTATGCAAGTCTCA TTGCAGAGGAATATAGTAAGGGGTTGAGGGTCACATTTGTATTTGGGGCG GGGATGGCGGGCGTGGTGTTTGTTATGGCTTGTTGTATGGAGGTTAGATC GGTCAAGTAGATGGCTACGATGACAGAGGAGATTGTCTTGACTGAAAGGG TGGAAGAGGCCGCTCCAGCATCGAAGATCGATTCCAATGCCCAAGTTAGA GATGGAGGTTCTCATGAAGAGCAGCCAGTATACCCACATGGATTCCACTT CGCTCTAATCTCTGCTTCCCTGGTGCTCACTGTGTTCTTGACGGGACTGG ATGAAACTATCATAACAACTGCAGTGCCCAAAATCACGGATGAATTCCAC TCCATCGCTGATGTTGGGTGGTATGGGTCTGCGTTTCGGCTGGCATCCAG CATGTCCCAGCTTCTTCAAGGCAGAGTATTCGATCAGTTCTCCGTAAAAT GGGCATTTCTACTTCACCTCATCGTTTTTGAAGCTGGCGCTATCATCTCC GGCGCTGCCCCTTCCTCGCTGGTCTTCATCATCGGGCGCGTCATCAGCGG ACTTGGCTTTTCGGGTATAAGCCAGGGCTGCATGGTGATCATTTCCATGA CTAGACCCTTAAACAAACGTCCCATCTACATCGGAGCCATCAGCGCAAGC GAGTTCTGCGCGACTGCCATCGCCCCTATCATCGGCGGTGCCATCACTTC CTCCTTATCATGGCGATGGTGTTTCTACCTTAACGTGATAGGCTCCATCC TGCCTGCCATTACCACTCTGGTGATATTCAAGAGCCCCTCGGGCAGGATC ACCCATGGCGTAAGCCACGTTCAACGCCTCAAGCAAATAGATTTCGCCGG AATGGTTCTCTTCGCAGCAGGCCTACTAACCCTTCTCTTATCGATTCAAT GGGGCGGAGACACCTACAGTTGGAGCAATGACCGCATCATTGCATTGCTA ACGATATCACCCATCTTCTTTGTCGTTTTCTTGCTCGTACAGGTGAAGAA GCAAGACTTCGCTATGCTTCCTTTACGACTCCTAAAACAGCGCTCAATCC TCTTCGGAGCCCTGTTCAGTCTAGCCCTTCAGGCCGTGAACGGCATTGCC TCCTACTACCTCTCCCTCTGGTTCCAAGTAGTCAGATCCGCTACCCCCCT GCAATCCGGCCTCATGCTCCTCCCAATGGTAATATCCATCCTCCTCGCCA GCGTCATCTCCGGCTACGCCATAACATACATAGGATATTACGTGATCTTC ATGATCCCTGCCGGACTCATCACCCTGGCAGGTGCCATCATGACGACCTA CTTCGAAAAGGACACCCCAGCCACATTCTGGATCCCTGCTCTCGCTCTCC TCGGCTTTGGGATCGGCCTGGGAATCTCCGGACCCTTTCTAGCTGTCCAA GCTATCCTCCCGGAGAAAGACACGTCCGTCGGACTAGCTATCATGTCTTT CTCGCAGGAGTTTGGCATCGCGCTGTCCCTGGGTATCGCGCAGTGTTTGT TCTTGAATAAATTGAAGGAGAGTATTGAAGCTATCACGCCGTATCTGGAT CCAGAGAGTGTGATTAATGCGGGGGCAACGAGTTTGGTGGGGACCGGGTT GGAGAAGTATGCAAGTCTCATTGCAGAGGAATATAGTAAGGGGTTGAGGG TCACATTTGTATTTGGGGCGGGGATGGCGGGCGTGGTGTTTGTTATGGCT TGTTGTATGGAGGTTAGATCGGTCAAGTAGATGGCTACGATGACAGAGGA GATTGTCTTGACTGAAAGGGTGGAAGAGGCCGCTCCAGCATCGAAGATCG ATTCCAATGCCCAAGTTAGAGATGGAGGTTCTCATGAAGAGCAGCCAGTA TACCCACATGGATTCCACTTCGCTCTAATCTCTGCTTCCCTGGTGCTCAC TGTGTTCTTGACGGGACTGGATGAAACTATCATAACAACTGCAGTGCCCA AAATCACGGATGAATTCCACTCCATCGCTGATGTTGGGTGGTATGGGTCT GCGTTTCGGCTGGCATCCAGCATGTCCCAGCTTCTTCAAGGCAGAGTATT CGATCAGTTCTCCGTAAAATGGGCATTTCTACTTCACCTCATCGTTTTTG AAGCTGGCGCTATCATCTCCGGCGCTGCCCCTTCCTCGCTGGTCTTCATC ATCGGGCGCGTCATCAGCGGACTTGGCTTTTCGGGTATAAGCCAGGGCTG CATGGTGATCATTTCCATGACTAGACCCTTAAACAAACGTCCCATCTACA TCGGAGCCATCAGCGCAAGCGAGTTCTGCGCGACTGCCATCGCCCCTATC ATCGGCGGTGCCATCACTTCCTCCTTATCATGGCGATGGTGTTTCTACCT TAACGTGATAGGCTCCATCCTGCCTGCCATTACCACTCTGGTGATATTCA AGAGCCCCTCGGGCAGGATCACCCATGGCGTAAGCCACGTTCAACGCCTC AAGCAAATAGATTTCGCCGGAATGGTTCTCTTCGCAGCAGGCCTACTAAC CCTTCTCTTATCGATTCAATGGGGCGGAGACACCTACAGTTGGAGCAATG ACCGCATCATTGCATTGCTAACGATATCACCCATCTTCTTTGTCGTTTTC TTGCTCGTACAGGTGAAGAAGCAAGACTTCGCTATGCTTCCTTTACGACT CCTAAAACAGCGCTCAATCCTCTTCGGAGCCCTGTTCAGTCTAGCCCTTC AGGCCGTGAACGGCATTGCCTCCTACTACCTCTCCCTCTGGTTCCAAGTA GTCAGATCCGCTACCCCCCTGCAATCCGGCCTCATGCTCCTCCCAATGGT AATATCCATCCTCCTCGCCAGCGTCATCTCCGGCTACGCCATAACATACA TAGGATATTACGTGATCTTCATGATCCCTGCCGGACTCATCACCCTGGCA GGTGCCATCATGACGACCTACTTCGAAAAGGACACCCCAGCCACATTCTG GATCCCTGCTCTCGCTCTCCTCGGCTTTGGGATCGGCCTGGGAATCTCCG GACCCTTTCTAGCTGTCCAAGCTATCCTCCCGGAGAAAGACACGTCCGTC GGACTAGCTATCATGTCTTTCTCGCAGGAGTTTGGCATCGCGCTGTCCCT GGGTATCGCGCAGTGTTTGTTCTTGAATAAATTGAAGGAGAGTATTGAAG CTATCACGCCGTATCTGGATCCAGAGAGTGTGATTAATGCGGGGGCAACG AGTTTGGTGGGGACCGGGTTGGAGAAGTATGCAAGTCTCATTGCAGAGGA ATATAGTAAGGGGTTGAGGGTCACATTTGTATTTGGGGCGGGGATGGCGG GCGTGGTGTTTGTTATGGCTTGTTGTATGGAGGTTAGATCGGTCAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_007603-T1.utr5p1 | KJC3_007603-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_007603-T1.utr3p1 | KJC3_007603-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch5 | supercontig | ch5:2903537..2905705 + |
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