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KJC3_007604-T1, KJC3_007604-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007604-T1
Unique NameKJC3_007604-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2905597..2907117-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007604-T1 ID=KJC3_007604-T1|Name=KJC3_007604-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1521bp|location=Sequence derived from alignment at ch5:2905597..2907117- (Aspergillus niger KJC3)
CCTCTTTACGCGCTACGCGTCTCTCGTGTATTTTGGATAGCTACAATCAC
TTTACTTTTCTTCGTTCAACATATTTCATAACGAGGCAAGCCTTTATATC
AGTGACTCGGCATACTGCTCCTCCAATATCAACATCATGTCCGACTACGA
GGACTCAATGGACGTGGACGTCCCCTCCAAGAGCGCAATTCAATTCAGCT
CCGACAACACAAGTGGAAAGGCAAAGCGAGTAGCAGCAGATTTGCCCGTT
GAAGCTCAAGATAACCTGCCTTGGTACATCCCCTATGTTTACAAAGCCTT
GCGACATTTTCTAACCATCAAAATACAGGGTAGAGAAATACCGCCCCAAC
ACCCTAGAAGATGTATCCGGCCACCAAGACATCCTCGCAACAATCAACAA
ATTCGTCGAAGCAAACGTACGTCTCTCCTCTCATTCCCTCAATGATATGC
TTAAGCTAACAGCGTTTATCAACTTAACAGCGCCTCCCCCACCTCCTCCT
CTACGGCCCCCCAGGAACGGGCAAAACATCCACCATCCTCGCCCTAGCCC
GCCGAATCTACGGCGCAAAGAACATGCGCCAAATGGTACTGGAACTAAAC
GCTAGTGACGATCGCGGTATCGACGTCGTTCGAGAACAAATCAAGACCTT
TGCCAGCACAAAACAGATTTTCTCCATGGCACCCTCATCCACCTCCACCT
CCTCCTCGACCCTCGCCTCCTACAAACTCATCATTCTCGACGAAGCCGAC
GCCATGACCGCAACGGCCCAAATGGCTCTCCGTCGCATCATGGAGAAATA
CACAGCCAACACGCGGTTCTGCATAATCGCCAACTACACACACAAGCTCT
CTCCGGCACTCTTGTCCCGATGTACACGATTCCGGTTCAGCCCGCTGAAA
GAGGCAGATATCCGGGTATTAGTGGACATAGTGATTGAGAAGGAACAAGT
GAATATCCAGCCGGAGGCGGTGGATAGTCTGGTGCGGTTGAGTAAGGGAG
ATATGCGACGGGCGTTGAATGTGCTGCAGGCTTGTTTTGCGAGTAGTATA
CCGTTGCCGATTAAGAATGCCCCGAAAGATCAGGAAGCTAAGGAGAAGCC
GGAGGCGGAGGTTATCACGAACGAGACGATATATGATTGCATTGCTGCGC
CTCATCCGTCGGATATCGAGGAGATTATGACGACGTTGTTGGCGACGAGT
GATGTTACTTCGTGTTTGAGTACGATTAATACGCTCAAGGCGAATAAGGG
GTTGGCCTTGGCGGATATTCTTGCTGCGCTTGGGGATCAGTTGCAGAGGC
TGGAGGTGCCGGCGCAGACGAGAGTGACGTGGTTGGAAGGGTTGGCGGAG
ATTGAGTGGCGGTTGGCCGGGGGAGGATCGGAGTCGATGCAGACGGGAGG
GTTGGTGGGTGTTGTGAGGAATGGGTGTGAGTTGATGGGGAAATAGATGC
CCTTGATGCGCAGAGGGTTCGGATGTGATGATATCGTACACAGTATTATC
AGTATACCAGACATGCATGCA
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Coding sequence (CDS) from alignment at ch5:2905597..2907117-

>KJC3_007604-T1 ID=KJC3_007604-T1|Name=KJC3_007604-T1|organism=Aspergillus niger KJC3|type=CDS|length=3573bp|location=Sequence derived from alignment at ch5:2905597..2907117- (Aspergillus niger KJC3)
CGCCTCCCCCACCTCCTCCTCTACGGCCCCCCAGGAACGGGCAAAACATC
CACCATCCTCGCCCTAGCCCGCCGAATCTACGGCGCAAAGAACATGCGCC
AAATGGTACTGGAACTAAACGCTAGTGACGATCGCGGTATCGACGTCGTT
CGAGAACAAATCAAGACCTTTGCCAGCACAAAACAGATTTTCTCCATGGC
ACCCTCATCCACCTCCACCTCCTCCTCGACCCTCGCCTCCTACAAACTCA
TCATTCTCGACGAAGCCGACGCCATGACCGCAACGGCCCAAATGGCTCTC
CGTCGCATCATGGAGAAATACACAGCCAACACGCGGTTCTGCATAATCGC
CAACTACACACACAAGCTCTCTCCGGCACTCTTGTCCCGATGTACACGAT
TCCGGTTCAGCCCGCTGAAAGAGGCAGATATCCGGGTATTAGTGGACATA
GTGATTGAGAAGGAACAAGTGAATATCCAGCCGGAGGCGGTGGATAGTCT
GGTGCGGTTGAGTAAGGGAGATATGCGACGGGCGTTGAATGTGCTGCAGG
CTTGTTTTGCGAGTAGTATACCGTTGCCGATTAAGAATGCCCCGAAAGAT
CAGGAAGCTAAGGAGAAGCCGGAGGCGGAGGTTATCACGAACGAGACGAT
ATATGATTGCATTGCTGCGCCTCATCCGTCGGATATCGAGGAGATTATGA
CGACGTTGTTGGCGACGAGTGATGTTACTTCGTGTTTGAGTACGATTAAT
ACGCTCAAGGCGAATAAGGGGTTGGCCTTGGCGGATATTCTTGCTGCGCT
TGGGGATCAGTTGCAGAGGCTGGAGGTGCCGGCGCAGACGAGAGTGACGT
GGTTGGAAGGGTTGGCGGAGATTGAGTGGCGGTTGGCCGGGGGAGGATCG
GAGTCGATGCAGACGGGAGGGTTGGTGGGTGTTGTGAGGAATGGGTGTGA
GTTGATGGGGAAATAGGGTAGAGAAATACCGCCCCAACACCCTAGAAGAT
GTATCCGGCCACCAAGACATCCTCGCAACAATCAACAAATTCGTCGAAGC
AAACATGTCCGACTACGAGGACTCAATGGACGTGGACGTCCCCTCCAAGA
GCGCAATTCAATTCAGCTCCGACAACACAAGTGGAAAGGCAAAGCGAGTA
GCAGCAGATTTGCCCGTTGAAGCTCAAGATAACCTGCCTTGCGCCTCCCC
CACCTCCTCCTCTACGGCCCCCCAGGAACGGGCAAAACATCCACCATCCT
CGCCCTAGCCCGCCGAATCTACGGCGCAAAGAACATGCGCCAAATGGTAC
TGGAACTAAACGCTAGTGACGATCGCGGTATCGACGTCGTTCGAGAACAA
ATCAAGACCTTTGCCAGCACAAAACAGATTTTCTCCATGGCACCCTCATC
CACCTCCACCTCCTCCTCGACCCTCGCCTCCTACAAACTCATCATTCTCG
ACGAAGCCGACGCCATGACCGCAACGGCCCAAATGGCTCTCCGTCGCATC
ATGGAGAAATACACAGCCAACACGCGGTTCTGCATAATCGCCAACTACAC
ACACAAGCTCTCTCCGGCACTCTTGTCCCGATGTACACGATTCCGGTTCA
GCCCGCTGAAAGAGGCAGATATCCGGGTATTAGTGGACATAGTGATTGAG
AAGGAACAAGTGAATATCCAGCCGGAGGCGGTGGATAGTCTGGTGCGGTT
GAGTAAGGGAGATATGCGACGGGCGTTGAATGTGCTGCAGGCTTGTTTTG
CGAGTAGTATACCGTTGCCGATTAAGAATGCCCCGAAAGATCAGGAAGCT
AAGGAGAAGCCGGAGGCGGAGGTTATCACGAACGAGACGATATATGATTG
CATTGCTGCGCCTCATCCGTCGGATATCGAGGAGATTATGACGACGTTGT
TGGCGACGAGTGATGTTACTTCGTGTTTGAGTACGATTAATACGCTCAAG
GCGAATAAGGGGTTGGCCTTGGCGGATATTCTTGCTGCGCTTGGGGATCA
GTTGCAGAGGCTGGAGGTGCCGGCGCAGACGAGAGTGACGTGGTTGGAAG
GGTTGGCGGAGATTGAGTGGCGGTTGGCCGGGGGAGGATCGGAGTCGATG
CAGACGGGAGGGTTGGTGGGTGTTGTGAGGAATGGGTGTGAGTTGATGGG
GAAATAGGGTAGAGAAATACCGCCCCAACACCCTAGAAGATGTATCCGGC
CACCAAGACATCCTCGCAACAATCAACAAATTCGTCGAAGCAAACATGTC
CGACTACGAGGACTCAATGGACGTGGACGTCCCCTCCAAGAGCGCAATTC
AATTCAGCTCCGACAACACAAGTGGAAAGGCAAAGCGAGTAGCAGCAGAT
TTGCCCGTTGAAGCTCAAGATAACCTGCCTTGCGCCTCCCCCACCTCCTC
CTCTACGGCCCCCCAGGAACGGGCAAAACATCCACCATCCTCGCCCTAGC
CCGCCGAATCTACGGCGCAAAGAACATGCGCCAAATGGTACTGGAACTAA
ACGCTAGTGACGATCGCGGTATCGACGTCGTTCGAGAACAAATCAAGACC
TTTGCCAGCACAAAACAGATTTTCTCCATGGCACCCTCATCCACCTCCAC
CTCCTCCTCGACCCTCGCCTCCTACAAACTCATCATTCTCGACGAAGCCG
ACGCCATGACCGCAACGGCCCAAATGGCTCTCCGTCGCATCATGGAGAAA
TACACAGCCAACACGCGGTTCTGCATAATCGCCAACTACACACACAAGCT
CTCTCCGGCACTCTTGTCCCGATGTACACGATTCCGGTTCAGCCCGCTGA
AAGAGGCAGATATCCGGGTATTAGTGGACATAGTGATTGAGAAGGAACAA
GTGAATATCCAGCCGGAGGCGGTGGATAGTCTGGTGCGGTTGAGTAAGGG
AGATATGCGACGGGCGTTGAATGTGCTGCAGGCTTGTTTTGCGAGTAGTA
TACCGTTGCCGATTAAGAATGCCCCGAAAGATCAGGAAGCTAAGGAGAAG
CCGGAGGCGGAGGTTATCACGAACGAGACGATATATGATTGCATTGCTGC
GCCTCATCCGTCGGATATCGAGGAGATTATGACGACGTTGTTGGCGACGA
GTGATGTTACTTCGTGTTTGAGTACGATTAATACGCTCAAGGCGAATAAG
GGGTTGGCCTTGGCGGATATTCTTGCTGCGCTTGGGGATCAGTTGCAGAG
GCTGGAGGTGCCGGCGCAGACGAGAGTGACGTGGTTGGAAGGGTTGGCGG
AGATTGAGTGGCGGTTGGCCGGGGGAGGATCGGAGTCGATGCAGACGGGA
GGGTTGGTGGGTGTTGTGAGGAATGGGTGTGAGTTGATGGGGAAATAGGG
TAGAGAAATACCGCCCCAACACCCTAGAAGATGTATCCGGCCACCAAGAC
ATCCTCGCAACAATCAACAAATTCGTCGAAGCAAACATGTCCGACTACGA
GGACTCAATGGACGTGGACGTCCCCTCCAAGAGCGCAATTCAATTCAGCT
CCGACAACACAAGTGGAAAGGCAAAGCGAGTAGCAGCAGATTTGCCCGTT
GAAGCTCAAGATAACCTGCCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007604KJC3_007604Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007604-T1KJC3_007604-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007604-T1.cdsKJC3_007604-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007604-T1.utr3p1KJC3_007604-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007604-T1.exon3KJC3_007604-T1.exon3Aspergillus niger KJC3exon
KJC3_007604-T1.exon2KJC3_007604-T1.exon2Aspergillus niger KJC3exon
KJC3_007604-T1.exon1KJC3_007604-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007604-T1.utr5p1KJC3_007604-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR013748
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08542
DBxrefPFAM:PF13177
DBxrefPFAM:PF07728
DBxrefPFAM:PF13604
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2905597..2907117 -
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