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KJC3_007623-T3, KJC3_007623-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007623-T3
Unique NameKJC3_007623-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2969129..2972202-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007623-T3 ID=KJC3_007623-T3|Name=KJC3_007623-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3074bp|location=Sequence derived from alignment at ch5:2969129..2972202- (Aspergillus niger KJC3)
GTCGCAATCCTTCCCAGAGTTGATGCCTCAATGCCTTAATCCTTCGTGCC
TTTTTGCCTTTTAATATGTTGATGCCTTGTAGCCATGTAGCCTTATGGCC
TTGTCGCCTGAGCTCCCCGCACGTGGCGGGCCCAGCCGCAGGTTCCTTTG
CGGCTTCGTTCTTCCCCGCACATTCTGGTCTTCCACCGGCAAACATAATC
ACTTTCTCTCCACTACCCCGGATCCTGTCTATCGCAGCCCAGAAATCTCC
ATCCGTTGCTTTCCCCCTCGCTCGTGACGTATTCTGCAGCCCCTAGTCCA
CTTGCTACATGCAGAAAGCCTCCAGGAGGTCGACTCCCCGGTCGCGAATA
TCCAAGGCTTGCGACCGTTGTCGTCGACAGAAGCTCAAGGTAGACTCCGA
CATTGGGGATAAGCTGGGAATAACCAACCGTGCACTATACTAATTGATTT
CAGTGTGACTCAGTTCGTCCATGTGTTCTATGCACCCGTGCTGGCCACAT
ATGCGAGACAACTACAGTATCACGTCGTCGTGTTTCCGAATACCAAACAC
CGGCCACTCCAGCGGCTTCCGCCGGATCTGAGACGCCGCAGGTCTTACCG
CGCAGAGCGTCCGAGGACCACCAACAATATGCAACGGGCACTTCAGCGAT
TGGTTTTGCCAGACAAGTTTATAATGAAGAGGAGACAGGCCGGACCTTGA
CTGAAGCTGCTGTGCCGGGTGATGTTGGCATGGCGGGTACTGATAATTCC
CTCTGGGGCCTCAAGGAGACATCCATGCCACCAAGGACTGTGATGCTAGC
ATTGATCAATGCCTACTTTGACCGAATGCAGTGGTTTATCTTGGTACTCC
ACGAGCCCTCATTCCGAGAAATGGCCCAGCCAATCATCTCTCAGCATGAA
TGGCAACGCCAGGATCTTGGTGCAGTCATGACTGTGCTTGCCGTCGCTGT
CATAAGCTTACAATCTGTCCTGCCAGACGCAGATTGGCCTGGTCATATCC
TCCTGGCTAGGCATTCGATTGATGCCCAGGATTTGCTGAACAAATTTCTG
GCCGAGATTCGTGCCCGTGTGCTTGACATGTTGGAGGACCGCCGTATCGA
AGGAGTCCAAGTCTGTCTCTTACTCTGTTGCTATTACATGTTCCACAGCT
CCCCAAACATGGCGTGGACCACGTGTGGTATGGCTTTCAGAGCTGCATAT
GCTCTGAACCTTCAAGAAACCAGTACATTGTCACAAACTTCTGTCGCTAA
TGAGACACGCTCTCGTTGTTGGAACCAGATCATCATCTCGGATACATTCT
GTTCCATTCTCTATGGACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGT
CACCTACAGCTCGTCGACGACCTGGCCATTGATCACTCGTTGTTAAACGA
TCTCTCGGTGGACAATAGCGACGGACTAACGTCGCGCGCCCCATTTCACG
TCTTGAAGACAGATGTGTATGCGATTGCTCGCGAAATTCTTATTCGATTC
CGTCGGCTTGACCTGACATCTGGAATAGACGAACAGGACTTGGAAGCTAT
CATTCGTATTACCGAAGAGTCCAACGCACTTCTCACTGACTGGTGGAAGT
CCGTCCCGAAACTGTATGACTTCGATTACTGGAAAGCAGACGGTCGATGG
GAAATGGTTGAAGGCCAGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACA
GGTGGAGACAATATATCTACAGGCTGCTGTTCTCCAGTTGACGTACGACG
GCATGGTCATCCAAGCAAATAGACCACTGTTGGAGCGAAGAATCAACAGG
CTAACATCTTCGCGGGCGATCATGGATGCGATGCATAGGGCGCTTGACCG
AGCCACGGCTGCTGCTCTCCGCATATCCCGTGTTCCAGTTCACAAGCTGA
AAAATCATTTTGCTATAGCAGTCGTATCGATGCAAGAGTTCACTGCTGGT
GTGATTCTCTGTATACCTCCCACGGTGAAGCCTTTAACGGCCACCGCTCA
TGAGGCGAAGGACGGGGTGGTAAGAATAATACGCGCCAGTCGAAGTCTCA
AGAGCCACGATCGAATAGCAAGGCAAACTGAACAACTTCTGACGGAGCTA
CTGAAAGTTACCACCCAACGCGAGATAACGCACGCCTTGGCCGATAATCT
CGACACCAATTTCCCCTCCGATACGCGGCTAACAGGCTCCGCTGTTGCCG
GCGCCTCAAATGACTCCTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGA
TCCGCAGCGCAGGCAGTTGTAGATCCTATCCAAGGAGCCTGGGACTCAGA
ATTTAATGCCCTCCCTGCCGTAACGGGACCTTATGATTTCCTCCCTGCTC
AAGCCTTTCAACAGCTGGACGATACATTTGGTGCCTTTGGAGAATGTAAT
GTCCCTTGATCACCCCAGACTCACATCCAGATTCTGACTGACCTCGTGCA
TAGCCATATTTAACTTGGTCCCTGATGATCAAAACAGTACATGGAACTGG
GGCCGAACATTTCCCTAGCCAAAGGAGCATCAAGGAGTTAACGTGATCAG
TACAGCCTTGTAGCTCGCTGTAACTGCCCTGGAGCCAAGCCAAAGCCTAG
ACCGCAAGGTGCATGGGCGAGCTTTGCGAGGATTTAGTTGTTATTTAGTA
TGCCAAGATTGAGCCACGCAGAATGGCTTATGGCCATAGTAGCAACAATG
GCCACGGAAAGTTCTTCCATGTGGTATGGGGAAAGCCGCCGGATATTTGG
GGAGGGCGTGATTGTTCCGGTGGCTATCTTCCCGGTGGAGATAACGGCGG
TGACCATCAAAACTCCTCAGCCCGGATGGCTCGGACTCCGCATCGTCAAT
TATCGGTTTCGTGACAACCATTCAACTACTTAGCAGACACAAATAGCAAT
CCCACTTACCCCGACCTTTAATAATAATTTTTAGCGGATCTATCGATCTC
AGAGACAATATTGCCATCGTTCTGTGTGGAAGGCCAGCGCCATGGTTTCA
CAATAATAATCCTCAAAATTGCCCAAAAGCTAAAGCGAAGGAAAGTCGAG
AAGCCCAGTCTAGACTGGCAGGCT
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Coding sequence (CDS) from alignment at ch5:2969129..2972202-

>KJC3_007623-T3 ID=KJC3_007623-T3|Name=KJC3_007623-T3|organism=Aspergillus niger KJC3|type=CDS|length=2766bp|location=Sequence derived from alignment at ch5:2969129..2972202- (Aspergillus niger KJC3)
CCATATTTAACTTGGTCCCTGATGATCAAAACAGTACATGGAACTGGGGC
CGAACATTTCCCTAGATGTTGGAGGACCGCCGTATCGAAGGAGTCCAAGT
CTGTCTCTTACTCTGTTGCTATTACATGTTCCACAGCTCCCCAAACATGG
CGTGGACCACGTGTGGTATGGCTTTCAGAGCTGCATATGCTCTGAACCTT
CAAGAAACCAGTACATTGTCACAAACTTCTGTCGCTAATGAGACACGCTC
TCGTTGTTGGAACCAGATCATCATCTCGGATACATTCTGTTCCATTCTCT
ATGGACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGTCACCTACAGCTC
GTCGACGACCTGGCCATTGATCACTCGTTGTTAAACGATCTCTCGGTGGA
CAATAGCGACGGACTAACGTCGCGCGCCCCATTTCACGTCTTGAAGACAG
ATGTGTATGCGATTGCTCGCGAAATTCTTATTCGATTCCGTCGGCTTGAC
CTGACATCTGGAATAGACGAACAGGACTTGGAAGCTATCATTCGTATTAC
CGAAGAGTCCAACGCACTTCTCACTGACTGGTGGAAGTCCGTCCCGAAAC
TGTATGACTTCGATTACTGGAAAGCAGACGGTCGATGGGAAATGGTTGAA
GGCCAGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACAGGTGGAGACAAT
ATATCTACAGGCTGCTGTTCTCCAGTTGACGTACGACGGCATGGTCATCC
AAGCAAATAGACCACTGTTGGAGCGAAGAATCAACAGGCTAACATCTTCG
CGGGCGATCATGGATGCGATGCATAGGGCGCTTGACCGAGCCACGGCTGC
TGCTCTCCGCATATCCCGTGTTCCAGTTCACAAGCTGAAAAATCATTTTG
CTATAGCAGTCGTATCGATGCAAGAGTTCACTGCTGGTGTGATTCTCTGT
ATACCTCCCACGGTGAAGCCTTTAACGGCCACCGCTCATGAGGCGAAGGA
CGGGGTGGTAAGAATAATACGCGCCAGTCGAAGTCTCAAGAGCCACGATC
GAATAGCAAGGCAAACTGAACAACTTCTGACGGAGCTACTGAAAGTTACC
ACCCAACGCGAGATAACGCACGCCTTGGCCGATAATCTCGACACCAATTT
CCCCTCCGATACGCGGCTAACAGGCTCCGCTGTTGCCGGCGCCTCAAATG
ACTCCTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGATCCGCAGCGCAG
GCAGTTGTAGATCCTATCCAAGGAGCCTGGGACTCAGAATTTAATGCCCT
CCCTGCCGTAACGGGACCTTATGATTTCCTCCCTGCTCAAGCCTTTCAAC
AGCTGGACGATACATTTGGTGCCTTTGGAGAATCCATATTTAACTTGGTC
CCTGATGATCAAAACAGTACATGGAACTGGGGCCGAACATTTCCCTAGAT
GTTGGAGGACCGCCGTATCGAAGGAGTCCAAGTCTGTCTCTTACTCTGTT
GCTATTACATGTTCCACAGCTCCCCAAACATGGCGTGGACCACGTGTGGT
ATGGCTTTCAGAGCTGCATATGCTCTGAACCTTCAAGAAACCAGTACATT
GTCACAAACTTCTGTCGCTAATGAGACACGCTCTCGTTGTTGGAACCAGA
TCATCATCTCGGATACATTCTGTTCCATTCTCTATGGACGTCCCGCTTCT
CTGCCTTCTGCCAATGTTCGTCACCTACAGCTCGTCGACGACCTGGCCAT
TGATCACTCGTTGTTAAACGATCTCTCGGTGGACAATAGCGACGGACTAA
CGTCGCGCGCCCCATTTCACGTCTTGAAGACAGATGTGTATGCGATTGCT
CGCGAAATTCTTATTCGATTCCGTCGGCTTGACCTGACATCTGGAATAGA
CGAACAGGACTTGGAAGCTATCATTCGTATTACCGAAGAGTCCAACGCAC
TTCTCACTGACTGGTGGAAGTCCGTCCCGAAACTGTATGACTTCGATTAC
TGGAAAGCAGACGGTCGATGGGAAATGGTTGAAGGCCAGCTGCAAAGGCT
TCCCTCCGAAGCAAGGCAACAGGTGGAGACAATATATCTACAGGCTGCTG
TTCTCCAGTTGACGTACGACGGCATGGTCATCCAAGCAAATAGACCACTG
TTGGAGCGAAGAATCAACAGGCTAACATCTTCGCGGGCGATCATGGATGC
GATGCATAGGGCGCTTGACCGAGCCACGGCTGCTGCTCTCCGCATATCCC
GTGTTCCAGTTCACAAGCTGAAAAATCATTTTGCTATAGCAGTCGTATCG
ATGCAAGAGTTCACTGCTGGTGTGATTCTCTGTATACCTCCCACGGTGAA
GCCTTTAACGGCCACCGCTCATGAGGCGAAGGACGGGGTGGTAAGAATAA
TACGCGCCAGTCGAAGTCTCAAGAGCCACGATCGAATAGCAAGGCAAACT
GAACAACTTCTGACGGAGCTACTGAAAGTTACCACCCAACGCGAGATAAC
GCACGCCTTGGCCGATAATCTCGACACCAATTTCCCCTCCGATACGCGGC
TAACAGGCTCCGCTGTTGCCGGCGCCTCAAATGACTCCTTAGGTGCAGGA
CGCTCCAGGCCAGTTCCCGGATCCGCAGCGCAGGCAGTTGTAGATCCTAT
CCAAGGAGCCTGGGACTCAGAATTTAATGCCCTCCCTGCCGTAACGGGAC
CTTATGATTTCCTCCCTGCTCAAGCCTTTCAACAGCTGGACGATACATTT
GGTGCCTTTGGAGAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007623KJC3_007623Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007623-T3KJC3_007623-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007623-T3.cdsKJC3_007623-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007623-T3.utr3p1KJC3_007623-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007623-T3.exon4KJC3_007623-T3.exon4Aspergillus niger KJC3exon
KJC3_007623-T3.exon3KJC3_007623-T3.exon3Aspergillus niger KJC3exon
KJC3_007623-T3.exon2KJC3_007623-T3.exon2Aspergillus niger KJC3exon
KJC3_007623-T3.exon1KJC3_007623-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007623-T3.utr5p3KJC3_007623-T3.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_007623-T3.utr5p2KJC3_007623-T3.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007623-T3.utr5p1KJC3_007623-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2969129..2972202 -
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