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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3169686..3173452+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007709-T1 ID=KJC3_007709-T1|Name=KJC3_007709-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3767bp|location=Sequence derived from alignment at ch5:3169686..3173452+ (Aspergillus niger KJC3)
GGAACGGAGGCCCATGCTCACAATGGCTACTTATAATGGTTGCATCTGAT
GCACGAAGTATAAGCGACTGCAACATGACGGCTTCTTACTACCTCAACCG
CACCACATCTTCGCTACAGCCTAATCGGGCAATCTCAAATCTGTCAGCGT
TGTTTCCCAATTTGCATCAGATAGCCCGTCAGCAAACAGCCAATACCCAG
CTACAAACATACTCATGTACTCTTTGAGATGCTTGTGGAAGCGCCCTTCT
TGAGTGAGAGCTGAATGTACATTGCACCCTCTCCAGTGCATGATTCAAGA
TGACGCTGTTGTGAAACTCTTGCCTTAGGGGTGATATTAGTATGTTTAAA
GACAGTGATACTTCCTACTTAAAGGTGACTGTCCGCAGCGCCACTGGCTT
GAATGAACTAAATATCGTCAGTAACCTACCTGCACTGCCCATGAGTCACG
ACTCCTCGGTCCAGTGCATGAATGCGTCATTCCTTCATAGCAGGATTCGA
GGGTGTAGTCCACCAACGAGCAGCAAATTGCGAAACAGCCAGCCTTTTAC
CAAATCACTAAAGCTGCTATCCATGGCCTCCTTGCATCGGCTCACTGTGT
GAGTCAGGCGCACGTCACGAGGGGGAAAGTTCTATAACTGGGGATATTTG
CCACTGGTGCACGATAGACACTGTCAAAACAAATATAGTCACCGATGGGA
AAGGTGGGTCCACGGACAAGATCGTGCGTGAGGCTGCAAAGTGCTCGCTC
GCTATGAGTCAGGGCAAGAAGGGAAGCGCCGCCGATTCCGGGGATCCGCC
AGATGGGAGCACGTGGCATGGATGGGGGAAAATGGGATCCAGGCCCATTG
GGATCATGGCTAGTTTGGCTGGAGCTGTCACGGGTCGGCAAACCGGGCTG
TAGACGAACGAGTCAGATCGGCTTCGCGGGCTTCTTCAGAAACTTCGATT
TCTCCAGGTTCGACAAATTCAACGGGAGGCAAGCCGGAGTGCTGCCAGGG
AGCCCCGAAGTATCGGCAGGCGCCATGCCTCAGAACCCAGAACCTTAACC
TGATTGGGCAAGGCCTCCGTCTGGCCACCAGCCCTAACCAAGAACGCCGC
GGGAGAAGGCGGAAAAGTGGAAAACCTTGAGATGGGGAACCTGGAATCCG
CCACCGCGTCGCTGCATAAGGTTTAGTGGCTACGATTCTCCCTCCGGCGG
CCGGATTGCAAAGGAAAAGAGGGGACGCAAGTTGCATTTCCGGGGCTGAG
CTTAATTTGATCCTCATGCTTCCCCCAGGTCCGGTGCCGGACCAGCATGC
TCCTGCTGCATCTTGTGCAATCGAGGTCTAAAAACAGTGCAGGATGTTCG
TCGATCATCTTTAGATAGTCCCTGGACGTTTTTTTAGCTCGAATAGAGTC
TTTTTGTGCCTGAACGATGCATGGTGCGACCGGTGGAGCCGCGAGGCCCA
GCAGGAGCCCGATGTCGGAGCAGGATTCTGCGGGCGGCAAAGTTTGTGTC
ACACCAGCAGAGATTGCATTGAGGCGCCCTCTGATTTGCCAATGCGACCC
TTCTATTAACTAAGAAAAACCTCCTCGCCATGCGTCAATGCTTTTCAGGC
CGTGGCCATATATGGTTGACGCCCGCGTCGTGCGGGCGTGCCTGGGTTTA
GTTCCGCTACTCCTTTACTTGTCGTTGTTGCTGCTGCTGCTGCTGCCGCT
GAGATTTGAGATTTGAGACGGGTGCTTGTTCAACACTATTTTCCATCCAT
CTCATTCTACTCGTGGAGTCAGCCTGCCAACCGTCCCTAAAGAGCAACCA
TGTCGACCTTGGACGTGAAGGATATTGAGAATGGACCGGCTCGCCGGGTT
GAGGAAGAGGGGGGCATGTGGGAGAATGATATGGAGAAGACGCCTTCCGT
GGAGAGGGATCCTTTTGGAAATGAAGCTGTGGGAGAGGTTCACTATAAGA
CTCTCGACTGGTGGTATGTTTGAGCCCCATGAACTATACCCGACCGTTGA
TACTAGGCGGCATATACTTGATGGCAGAGACTAACCAACTATTCTTTCTC
GTTTATAGGCAATCTGGCATGCGTATGCTCTCCCCCACTTTGATATCAAT
ATTGTCTCTTTGTGCATGTAACCTAACATCCTTTCTCTCCAGTGATGATC
GCCGAGACTGTATCCCTGGGTGTTCTGTCTCTGCCCGCCACCGTGGCTGA
GGTTGGCCTGATTCCGTAAGTAGCATACGATCGCGTGCCTTCAACGTCGC
CCGCCCAGTCTGTCGCTAACCAGTAATGCAATCAGTGCCATCATCCTCAT
CGTGGGCATGGGCATCATTGCCACCTACTCCGGCTACGTCATTGGACAGT
TCCGGGCCAGATACCCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTC
TTGTGCGGCCGCTACGGTCGCATGTTCACGGAATTCGCTCAGCTGGTGTT
CTTCATGTTTGCATCTGGCAGTCACTTGGTGACCTTCACCGTTATGATGA
ACACCCTTACCAACCATGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGC
TTGGTGCTTTCCTTCGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTC
ATGGCTGGCTGTCACTTGTCAGTATCTCATTGGGTTCATCCCCAGTCTCC
TTATATTGTGCTAACACTTTCACACAGCCTTCCTCAGTATTTTCACGGCC
GTCTTGATCACCATGATTGGTGTCGCCGTTGAACATCCGAACCCTCCGCC
CATGCAGCTTACCCGCTCAACTTCTTTCGTCAAGGGTTTCTCGGCTGTCA
CTAACATCGCTTTCGCCTACTGTTCGTCTCCCTTTCCTATGTCCACTGTC
ATCCGGTCGCATCTGAGTAACTAACCCCTTCTCCAGGTGGTCACCCGGCT
TTCTTTGGTTTCATCGCCGAAATGAAGGAGCCCAAGGACTTCCCCAAGTC
CCTCTGTATGTTGCAGGGTTTCGAGATCGTCTTCTATACGGTCGCCTCCG
CCGTCATCTACCGCTACGCCGGTCAGAACGTCACCTCCCCCGCCCTGGGC
TCTGCCGGTATCGTCGTTCGCAAGGTCGCCTACGGCATTGCCATCCCCAC
CATCGTCATCGCGGGTGTCGTCCTGGGACACGTGGCCATCAAGAACGTCT
ATGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAAGCGCAGTGCCCTG
GGTATCGGTGCCTGGATTGGGCTCGCTGCGGGCTACTGGATTATTGCCTG
GGTGATTGCCGAGGCCATTCCTGTCTTTAGCGATCTCGTCAGCTTGGTCA
GCGCATTGTTTGCCAGTTGGTTTTCATGTGAGTCTCCCATACAGTCTGAC
TACTCCTACTTCGTCATTGAACTCGGTCACTAATAATTTTCTAGTTGGTC
TGCCCGGTGTCTTCTGGCTGTACATGTACTGGGGCAACTACTTCACCTCT
ATTCGCAAAACGCTCCTTACTCTCGCCAATTTGGCGTTGTTCGGCATTGG
CGCTACCATCTGTGTCTGTGGTCTGTGGGTCTCTGGCCTCTCGATCTCTA
GTGACAGCTCTGGCAGCAGCTTTTCGTGCGCCAATAATGCCTAATTTGGG
TCATGAGCTACTGCTTCCTCATGACCGGGTTGTATATATGTATAGATTTG
TATTATAGATAGACTTTTATTTAATATACCCCTTTGCGTTCGTTGTTCAC
TATCAGATTCGTACATATATATGCGCCAAACCCACATATTAAAGCTAATG
CCTAGTACTATTTCCTG back to topCoding sequence (CDS) from alignment at ch5:3169686..3173452+ >KJC3_007709-T1 ID=KJC3_007709-T1|Name=KJC3_007709-T1|organism=Aspergillus niger KJC3|type=CDS|length=5940bp|location=Sequence derived from alignment at ch5:3169686..3173452+ (Aspergillus niger KJC3)
ATGATCGCCGAGACTGTATCCCTGGGTGTTCTGTCTCTGCCCGCCACCGT
GGCTGAGGTTGGCCTGATTCCTGCCATCATCCTCATCGTGGGCATGGGCA
TCATTGCCACCTACTCCGGCTACGTCATTGGACAGTTCCGGGCCAGATAC
CCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTCTTGTGCGGCCGCTA
CGGTCGCATGTTCACGGAATTCGCTCAGCTGGTGTTCTTCATGTTTGCAT
CTGGCAGTCACTTGGTGACCTTCACCGTTATGATGAACACCCTTACCAAC
CATGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGCTTGGTGCTTTCCTT
CGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTCATGGCTGGCTGTCA
CTTCCTTCCTCAGTATTTTCACGGCCGTCTTGATCACCATGATTGGTGTC
GCCGTTGAACATCCGAACCCTCCGCCCATGCAGCTTACCCGCTCAACTTC
TTTCGTCAAGGGTTTCTCGGCTGTCACTAACATCGCTTTCGCCTACTGTG
GTCACCCGGCTTTCTTTGGTTTCATCGCCGAAATGAAGGAGCCCAAGGAC
TTCCCCAAGTCCCTCTGTATGTTGCAGGGTTTCGAGATCGTCTTCTATAC
GGTCGCCTCCGCCGTCATCTACCGCTACGCCGGTCAGAACGTCACCTCCC
CCGCCCTGGGCTCTGCCGGTATCGTCGTTCGCAAGGTCGCCTACGGCATT
GCCATCCCCACCATCGTCATCGCGGGTGTCGTCCTGGGACACGTGGCCAT
CAAGAACGTCTATGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAAGC
GCAGTGCCCTGGGTATCGGTGCCTGGATTGGGCTCGCTGCGGGCTACTGG
ATTATTGCCTGGGTGATTGCCGAGGCCATTCCTGTCTTTAGCGATCTCGT
CAGCTTGGTCAGCGCATTGTTTGCCAGTTGGTTTTCATTTGGTCTGCCCG
GTGTCTTCTGGCTGTACATGTACTGGGGCAACTACTTCACCTCTATTCGC
AAAACGCTCCTTACTCTCGCCAATTTGGCGTTGTTCGGCATTGGCGCTAC
CATCTGTGTCTGTGGTCTGTGGGTCTCTGGCCTCTCGATCTCTAGTGACA
GCTCTGGCAGCAGCTTTTCGTGCGCCAATAATGCCTAAATGATCGCCGAG
ACTGTATCCCTGGGTGTTCTGTCTCTGCCCGCCACCGTGGCTGAGGTTGG
CCTGATTCCTGCCATCATCCTCATCGTGGGCATGGGCATCATTGCCACCT
ACTCCGGCTACGTCATTGGACAGTTCCGGGCCAGATACCCCTTCATCCAC
AGCATGGCGGATGCCGGCGAGGTCTTGTGCGGCCGCTACGGTCGCATGTT
CACGGAATTCGCTCAGCTGGTGTTCTTCATGTTTGCATCTGGCAGTCACT
TGGTGACCTTCACCGTTATGATGAACACCCTTACCAACCATGGAACCTGC
TCTGTCGTGTTTGGTGTCGTCGGCTTGGTGCTTTCCTTCGCCTGCTCTCT
TCCTCGTACCATGAAGAACGTCTCATGGCTGGCTGTCACTTCCTTCCTCA
GTATTTTCACGGCCGTCTTGATCACCATGATTGGTGTCGCCGTTGAACAT
CCGAACCCTCCGCCCATGCAGCTTACCCGCTCAACTTCTTTCGTCAAGGG
TTTCTCGGCTGTCACTAACATCGCTTTCGCCTACTGTGGTCACCCGGCTT
TCTTTGGTTTCATCGCCGAAATGAAGGAGCCCAAGGACTTCCCCAAGTCC
CTCTGTATGTTGCAGGGTTTCGAGATCGTCTTCTATACGGTCGCCTCCGC
CGTCATCTACCGCTACGCCGGTCAGAACGTCACCTCCCCCGCCCTGGGCT
CTGCCGGTATCGTCGTTCGCAAGGTCGCCTACGGCATTGCCATCCCCACC
ATCGTCATCGCGGGTGTCGTCCTGGGACACGTGGCCATCAAGAACGTCTA
TGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAAGCGCAGTGCCCTGG
GTATCGGTGCCTGGATTGGGCTCGCTGCGGGCTACTGGATTATTGCCTGG
GTGATTGCCGAGGCCATTCCTGTCTTTAGCGATCTCGTCAGCTTGGTCAG
CGCATTGTTTGCCAGTTGGTTTTCATTTGGTCTGCCCGGTGTCTTCTGGC
TGTACATGTACTGGGGCAACTACTTCACCTCTATTCGCAAAACGCTCCTT
ACTCTCGCCAATTTGGCGTTGTTCGGCATTGGCGCTACCATCTGTGTCTG
TGGTCTGTGGGTCTCTGGCCTCTCGATCTCTAGTGACAGCTCTGGCAGCA
GCTTTTCGTGCGCCAATAATGCCTAAATGATCGCCGAGACTGTATCCCTG
GGTGTTCTGTCTCTGCCCGCCACCGTGGCTGAGGTTGGCCTGATTCCTGC
CATCATCCTCATCGTGGGCATGGGCATCATTGCCACCTACTCCGGCTACG
TCATTGGACAGTTCCGGGCCAGATACCCCTTCATCCACAGCATGGCGGAT
GCCGGCGAGGTCTTGTGCGGCCGCTACGGTCGCATGTTCACGGAATTCGC
TCAGCTGGTGTTCTTCATGTTTGCATCTGGCAGTCACTTGGTGACCTTCA
CCGTTATGATGAACACCCTTACCAACCATGGAACCTGCTCTGTCGTGTTT
GGTGTCGTCGGCTTGGTGCTTTCCTTCGCCTGCTCTCTTCCTCGTACCAT
GAAGAACGTCTCATGGCTGGCTGTCACTTCCTTCCTCAGTATTTTCACGG
CCGTCTTGATCACCATGATTGGTGTCGCCGTTGAACATCCGAACCCTCCG
CCCATGCAGCTTACCCGCTCAACTTCTTTCGTCAAGGGTTTCTCGGCTGT
CACTAACATCGCTTTCGCCTACTGTGGTCACCCGGCTTTCTTTGGTTTCA
TCGCCGAAATGAAGGAGCCCAAGGACTTCCCCAAGTCCCTCTGTATGTTG
CAGGGTTTCGAGATCGTCTTCTATACGGTCGCCTCCGCCGTCATCTACCG
CTACGCCGGTCAGAACGTCACCTCCCCCGCCCTGGGCTCTGCCGGTATCG
TCGTTCGCAAGGTCGCCTACGGCATTGCCATCCCCACCATCGTCATCGCG
GGTGTCGTCCTGGGACACGTGGCCATCAAGAACGTCTATGTCCGTCTCTT
CCGCGGCACGGATGTCATGCACAAGCGCAGTGCCCTGGGTATCGGTGCCT
GGATTGGGCTCGCTGCGGGCTACTGGATTATTGCCTGGGTGATTGCCGAG
GCCATTCCTGTCTTTAGCGATCTCGTCAGCTTGGTCAGCGCATTGTTTGC
CAGTTGGTTTTCATTTGGTCTGCCCGGTGTCTTCTGGCTGTACATGTACT
GGGGCAACTACTTCACCTCTATTCGCAAAACGCTCCTTACTCTCGCCAAT
TTGGCGTTGTTCGGCATTGGCGCTACCATCTGTGTCTGTGGTCTGTGGGT
CTCTGGCCTCTCGATCTCTAGTGACAGCTCTGGCAGCAGCTTTTCGTGCG
CCAATAATGCCTAAATGATCGCCGAGACTGTATCCCTGGGTGTTCTGTCT
CTGCCCGCCACCGTGGCTGAGGTTGGCCTGATTCCTGCCATCATCCTCAT
CGTGGGCATGGGCATCATTGCCACCTACTCCGGCTACGTCATTGGACAGT
TCCGGGCCAGATACCCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTC
TTGTGCGGCCGCTACGGTCGCATGTTCACGGAATTCGCTCAGCTGGTGTT
CTTCATGTTTGCATCTGGCAGTCACTTGGTGACCTTCACCGTTATGATGA
ACACCCTTACCAACCATGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGC
TTGGTGCTTTCCTTCGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTC
ATGGCTGGCTGTCACTTCCTTCCTCAGTATTTTCACGGCCGTCTTGATCA
CCATGATTGGTGTCGCCGTTGAACATCCGAACCCTCCGCCCATGCAGCTT
ACCCGCTCAACTTCTTTCGTCAAGGGTTTCTCGGCTGTCACTAACATCGC
TTTCGCCTACTGTGGTCACCCGGCTTTCTTTGGTTTCATCGCCGAAATGA
AGGAGCCCAAGGACTTCCCCAAGTCCCTCTGTATGTTGCAGGGTTTCGAG
ATCGTCTTCTATACGGTCGCCTCCGCCGTCATCTACCGCTACGCCGGTCA
GAACGTCACCTCCCCCGCCCTGGGCTCTGCCGGTATCGTCGTTCGCAAGG
TCGCCTACGGCATTGCCATCCCCACCATCGTCATCGCGGGTGTCGTCCTG
GGACACGTGGCCATCAAGAACGTCTATGTCCGTCTCTTCCGCGGCACGGA
TGTCATGCACAAGCGCAGTGCCCTGGGTATCGGTGCCTGGATTGGGCTCG
CTGCGGGCTACTGGATTATTGCCTGGGTGATTGCCGAGGCCATTCCTGTC
TTTAGCGATCTCGTCAGCTTGGTCAGCGCATTGTTTGCCAGTTGGTTTTC
ATTTGGTCTGCCCGGTGTCTTCTGGCTGTACATGTACTGGGGCAACTACT
TCACCTCTATTCGCAAAACGCTCCTTACTCTCGCCAATTTGGCGTTGTTC
GGCATTGGCGCTACCATCTGTGTCTGTGGTCTGTGGGTCTCTGGCCTCTC
GATCTCTAGTGACAGCTCTGGCAGCAGCTTTTCGTGCGCCAATAATGCCT
AAATGATCGCCGAGACTGTATCCCTGGGTGTTCTGTCTCTGCCCGCCACC
GTGGCTGAGGTTGGCCTGATTCCTGCCATCATCCTCATCGTGGGCATGGG
CATCATTGCCACCTACTCCGGCTACGTCATTGGACAGTTCCGGGCCAGAT
ACCCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTCTTGTGCGGCCGC
TACGGTCGCATGTTCACGGAATTCGCTCAGCTGGTGTTCTTCATGTTTGC
ATCTGGCAGTCACTTGGTGACCTTCACCGTTATGATGAACACCCTTACCA
ACCATGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGCTTGGTGCTTTCC
TTCGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTCATGGCTGGCTGT
CACTTCCTTCCTCAGTATTTTCACGGCCGTCTTGATCACCATGATTGGTG
TCGCCGTTGAACATCCGAACCCTCCGCCCATGCAGCTTACCCGCTCAACT
TCTTTCGTCAAGGGTTTCTCGGCTGTCACTAACATCGCTTTCGCCTACTG
TGGTCACCCGGCTTTCTTTGGTTTCATCGCCGAAATGAAGGAGCCCAAGG
ACTTCCCCAAGTCCCTCTGTATGTTGCAGGGTTTCGAGATCGTCTTCTAT
ACGGTCGCCTCCGCCGTCATCTACCGCTACGCCGGTCAGAACGTCACCTC
CCCCGCCCTGGGCTCTGCCGGTATCGTCGTTCGCAAGGTCGCCTACGGCA
TTGCCATCCCCACCATCGTCATCGCGGGTGTCGTCCTGGGACACGTGGCC
ATCAAGAACGTCTATGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAA
GCGCAGTGCCCTGGGTATCGGTGCCTGGATTGGGCTCGCTGCGGGCTACT
GGATTATTGCCTGGGTGATTGCCGAGGCCATTCCTGTCTTTAGCGATCTC
GTCAGCTTGGTCAGCGCATTGTTTGCCAGTTGGTTTTCATTTGGTCTGCC
CGGTGTCTTCTGGCTGTACATGTACTGGGGCAACTACTTCACCTCTATTC
GCAAAACGCTCCTTACTCTCGCCAATTTGGCGTTGTTCGGCATTGGCGCT
ACCATCTGTGTCTGTGGTCTGTGGGTCTCTGGCCTCTCGATCTCTAGTGA
CAGCTCTGGCAGCAGCTTTTCGTGCGCCAATAATGCCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007709-T1.utr3p1 | KJC3_007709-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3169686..3173452 + |
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