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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3176939..3178589+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007712-T1 ID=KJC3_007712-T1|Name=KJC3_007712-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1651bp|location=Sequence derived from alignment at ch5:3176939..3178589+ (Aspergillus niger KJC3)
CAGCCAGCGCGTTGAGGGCTATATTGCCAGCGTATCTCCCCGAAAAGCTG
ACAGGCAGCCTCTTTGATCGTCAGTCCCGGGAACAATCCCCATGTCCACA
GATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGA
TGGACGAGGAACCTGGTCCATTCTCTCGAGTTGTCTACTGACTATTGTAT
TGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGCTCCGACCGA
TGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCT
GGGCCCTGAATTTCTTCTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGC
GAGCGTCTGTCAAGGTCTCGATTTCTGCTGTAATTCGATGCTCAGAGCAA
CCTAGTCTAATGCCCACGTTAGGAATTTGAGCGACTAGCGACAACGGAGA
CCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTATGCGGATATG
GGGGGATTCTTGGTGGATGGTCCGGGAACTGAACGTCCATTTCCAGTAAA
CGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCTA
TGATTGACGAAGACGACATCAACGATCGAAACAAATCCGACGCTTTCTCT
CGGTATGTACCACACTTACTCAGGTCTGTTGCCCATCGGCTTATTCGAAT
GTCCAGTGTGATCGCAGTCTGCCAGGCACTCTGGCTGCTCGTCAACTGCG
CCATGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCACCACC
ATCTCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAA
GCCATCAGACATCTCAAGTACACTGACTCTGCACTCTAACACCAATTTTG
ACATCATGCGGAAGCAGGTACGTTTGACCCTATCCCAGCTGATATTCAGC
GCCACTGACAGTATCCCGTTCCGGAGCAGCACTGCCCATATCCCTCGCAA
GAATGGCACGAGACTCCCCTTGACTTCGTGTGCAACGATGTATCTTTCTG
TGCAGTGCATTGGCGCTACTACACAGAAATCCTGCGCAAAATGCATATTC
CTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGCATTGTCAGT
GATAACTTTCCCGTCACCGACCGGAAGGCCGATTGTATTGCTACCCCTGT
TCTGCTCCTATTCGGTTCGATTTTCATGCTTGCTTGGAACTTCCACTTTC
CTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTG
ACATTCACCGTCATTGGTGGACTGCATGCTGGTTATTGCGACAAGATCTT
GCTGCCCAGGGAGTATAACCGGCGACTCCTTCTTCCCTTATCGAGACCAA
AAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCC
GCCAAGTTGAGAAATATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCC
CCTTCGCGTGTTATTTCCTACTTCTGTGCTCTGTGCAGCTTACTGCGTGG
GTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGCAGCCTGCCT
GCCAGTGCCTTTCAGACGGTCAGCTGGTCGGACTACGTCCCACATCTGTA
G back to topCoding sequence (CDS) from alignment at ch5:3176939..3178589+ >KJC3_007712-T1 ID=KJC3_007712-T1|Name=KJC3_007712-T1|organism=Aspergillus niger KJC3|type=CDS|length=5544bp|location=Sequence derived from alignment at ch5:3176939..3178589+ (Aspergillus niger KJC3)
ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGA
CGAGCCCGATGGACGAGGAACCTGGTCCATTCTCTCGAGTTGTCTACTGA
CTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC
TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCT
GGGGCTCCTGGGCCCTGAATTTCTTCTTATGCTGGCCTTGGGGCAGTGGT
CCTCAGCGCGAGCGTCTGTCAAGGAATTTGAGCGACTAGCGACAACGGAG
ACCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTATGCGGATAT
GGGGGGATTCTTGGTGGATGGTCCGGGAACTGAACGTCCATTTCCAGTAA
ACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCT
ATGATTGACGAAGACGACATCAACGATCGAAACAAATCCGACGCTTTCTC
TCGTGTGATCGCAGTCTGCCAGGCACTCTGGCTGCTCGTCAACTGCGCCA
TGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCACCACCATC
TCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAAGCC
ATCAGACATCTCAAGTACACTGACTCTGCACTCTAACACCAATTTTGACA
TCATGCGGAAGCAGCACTGCCCATATCCCTCGCAAGAATGGCACGAGACT
CCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCG
CTACTACACAGAAATCCTGCGCAAAATGCATATTCCTATGTTTTCACGCC
CCATGACCGCAAAACCACGCGATCGCATTGTCAGTGATAACTTTCCCGTC
ACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGG
TTCGATTTTCATGCTTGCTTGGAACTTCCACTTTCCTTCCCCCACCGAAC
ATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTGACATTCACCGTCATT
GGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTA
TAACCGGCGACTCCTTCTTCCCTTATCGAGACCAAAAACTTCCACCAACC
CATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCCGCCAAGTTGAGAAAT
ATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATT
TCCTACTTCTGTGCTCTGTGCAGCTTACTGCGTGGGTCGCGCGTACGTTC
TTACGGAGGACTTTATCGGATTGCGCAGCCTGCCTGCCAGTGCCTTTCAG
ACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAGATGTCCACAGATTC
CACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGAC
GAGGAACCTGGTCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGT
TGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGCTCCGACCGATGGTA
TCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCC
CTGAATTTCTTCTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCG
TCTGTCAAGGAATTTGAGCGACTAGCGACAACGGAGACCACCGAGCGACC
CATTTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGG
TGGATGGTCCGGGAACTGAACGTCCATTTCCAGTAAACGCGAAGCAGCTT
CGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCTATGATTGACGAAGA
CGACATCAACGATCGAAACAAATCCGACGCTTTCTCTCGTGTGATCGCAG
TCTGCCAGGCACTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCAG
GGGCTGGCACTGACTACGTTGGAGCTCACCACCATCTCCTTTGTGGTTGT
GTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAAGCCATCAGACATCTCAA
GTACACTGACTCTGCACTCTAACACCAATTTTGACATCATGCGGAAGCAG
CACTGCCCATATCCCTCGCAAGAATGGCACGAGACTCCCCTTGACTTCGT
GTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGCTACTACACAGAAA
TCCTGCGCAAAATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAA
CCACGCGATCGCATTGTCAGTGATAACTTTCCCGTCACCGACCGGAAGGC
CGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGTTCGATTTTCATGC
TTGCTTGGAACTTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGT
GTCGCTAGTATCTACAACTTGACATTCACCGTCATTGGTGGACTGCATGC
TGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTATAACCGGCGACTCC
TTCTTCCCTTATCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGG
TCGTGCCTACGAAACTTAGCCGCCAAGTTGAGAAATATCGACCCGTATCG
CGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTTCCTACTTCTGTGC
TCTGTGCAGCTTACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTT
ATCGGATTGCGCAGCCTGCCTGCCAGTGCCTTTCAGACGGTCAGCTGGTC
GGACTACGTCCCACATCTGTAGATGTCCACAGATTCCACATCTACCCCAG
CCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGGTCC
ATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGT
CATGCCCAACATCCCTGCCCGCTCCGACCGATGGTATCATGGCCTGCGCG
ACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTTCTT
ATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGAATT
TGAGCGACTAGCGACAACGGAGACCACCGAGCGACCCATTTGGACCTTAA
CTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCGGGA
ACTGAACGTCCATTTCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGA
GAAGGGGTACGTCAAGTACCCTATGATTGACGAAGACGACATCAACGATC
GAAACAAATCCGACGCTTTCTCTCGTGTGATCGCAGTCTGCCAGGCACTC
TGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCAGGGGCTGGCACTGAC
TACGTTGGAGCTCACCACCATCTCCTTTGTGGTTGTGTTCCTAGTGACGT
CTTTCTGCTGGCGGTTCAAGCCATCAGACATCTCAAGTACACTGACTCTG
CACTCTAACACCAATTTTGACATCATGCGGAAGCAGCACTGCCCATATCC
CTCGCAAGAATGGCACGAGACTCCCCTTGACTTCGTGTGCAACGATGTAT
CTTTCTGTGCAGTGCATTGGCGCTACTACACAGAAATCCTGCGCAAAATG
CATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGCAT
TGTCAGTGATAACTTTCCCGTCACCGACCGGAAGGCCGATTGTATTGCTA
CCCCTGTTCTGCTCCTATTCGGTTCGATTTTCATGCTTGCTTGGAACTTC
CACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTA
CAACTTGACATTCACCGTCATTGGTGGACTGCATGCTGGTTATTGCGACA
AGATCTTGCTGCCCAGGGAGTATAACCGGCGACTCCTTCTTCCCTTATCG
AGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAA
CTTAGCCGCCAAGTTGAGAAATATCGACCCGTATCGCGATCCGAAGAGGG
AGGTTCCCCTTCGCGTGTTATTTCCTACTTCTGTGCTCTGTGCAGCTTAC
TGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGCAG
CCTGCCTGCCAGTGCCTTTCAGACGGTCAGCTGGTCGGACTACGTCCCAC
ATCTGTAGATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGC
TGGATTGACGAGCCCGATGGACGAGGAACCTGGTCCATTCTCTCGAGTTG
TCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCC
CTGCCCGCTCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTG
GCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTTCTTATGCTGGCCTTGGG
GCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGAATTTGAGCGACTAGCGA
CAACGGAGACCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTAT
GCGGATATGGGGGGATTCTTGGTGGATGGTCCGGGAACTGAACGTCCATT
TCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCA
AGTACCCTATGATTGACGAAGACGACATCAACGATCGAAACAAATCCGAC
GCTTTCTCTCGTGTGATCGCAGTCTGCCAGGCACTCTGGCTGCTCGTCAA
CTGCGCCATGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCA
CCACCATCTCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGG
TTCAAGCCATCAGACATCTCAAGTACACTGACTCTGCACTCTAACACCAA
TTTTGACATCATGCGGAAGCAGCACTGCCCATATCCCTCGCAAGAATGGC
ACGAGACTCCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTG
CATTGGCGCTACTACACAGAAATCCTGCGCAAAATGCATATTCCTATGTT
TTCACGCCCCATGACCGCAAAACCACGCGATCGCATTGTCAGTGATAACT
TTCCCGTCACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTC
CTATTCGGTTCGATTTTCATGCTTGCTTGGAACTTCCACTTTCCTTCCCC
CACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTGACATTCA
CCGTCATTGGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCC
AGGGAGTATAACCGGCGACTCCTTCTTCCCTTATCGAGACCAAAAACTTC
CACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCCGCCAAGT
TGAGAAATATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGC
GTGTTATTTCCTACTTCTGTGCTCTGTGCAGCTTACTGCGTGGGTCGCGC
GTACGTTCTTACGGAGGACTTTATCGGATTGCGCAGCCTGCCTGCCAGTG
CCTTTCAGACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007712-T1.utr5p1 | KJC3_007712-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3176939..3178589 + |
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