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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3209322..3210566+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007727-T2 ID=KJC3_007727-T2|Name=KJC3_007727-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1245bp|location=Sequence derived from alignment at ch5:3209322..3210566+ (Aspergillus niger KJC3)
AGGATACCCAAAATGACTGTTGCCGACAAATCAGACGAAGTTTATCCCCC
GATCCCCGCATACGGTGGTGAGTCGCCCCAGGAATTTAGATGTAATGGTT
GAGCAAGCTTACACCACGATTTTACAGGCCGGTGGACTCCGCCAAAGCAC
CTTCTGGACTGCTACAACCACATGTGGATTGACACAGACGTGTGGGAGCT
TCCAGAAAATGTTATTTACGAGCTCTACAGCCAACCAACGCGCGGTCCTG
GAGCGCAGGGTTCCTATCTGGTCGTCCTACCACCGGGCTACGATGATCGT
GATGTAAACGGCGAGCGATACCCCGTACTATACTGGCTTCATGGGGGCTT
TTCATGCTCGCGCCATGCGATGTGGTCCCTCCAATTCTATGCACGCAAAA
TAGAGCTGGGCACTATGCCCAAGGTAATTCTGGTGGCACCGCAGGTACGT
TTGGAGTGGCGTAATTGGAGGAAAGAGATTATTGTTATCCATACCCTTGC
TGATACCGTTCATAGTCATTGCCAAAAGGCCGCTGGATCAACAGCTACGA
CGGCAGCCGCCGCCTTGGGGACATCATGCGCCATGATCTCGTCACAGCTA
TTGATGAGCGGTACAGGACCATTAGACATCCATCAGCACGTTGGCTAGAG
GGTCACTCAGCGGGCGGGTAGGTGGCTGAACACCCGTAGAACGTTTCTTT
TACTAAAGACAGTTGACCAGTTATGGTGCCTTCAACCTCGGTCTCAAGTA
TCCCGATGTTTTCGGAGGCGCCTTGTCGTCGCTTGCTGGCTCATTCCGAA
CCGAATTAGCCAAGGAAGGCCTCGAGGTCACCTACGACACTTACAACGGC
TCGCAGGCCTTTTTCACTTCTAATCATGCTCTCACGCTGCTGAAGGCCAT
CCTCCCTCGGGTCCATCGCGACAAGCCGGAGCTGCGGCTGCTCATTGGCG
GCGAGGACATTAGACTACGTGAAGCACACGAGCACATGTGGACCAGCTTG
GATGCTCTGGGCGTGCCATATATGAAAGCTATTGTCCCGGGAGCTCCCCA
CACCGCAGAGCATGTCCTGGGCGGCCTGAACAACGAAGGTCTCCAGTTCT
GGTGGAACGCACGGGCAAAGGTTATTGAGGCCTGATCCTAGGGCGTGCTG
GGCCCTTCTATTTTGAGTAGTATAGTACCTTAGTCTTGAAATTATACTAC
CTTATCGTCTACAAGCATTTAGAAGCACTTCACTATGAATGAAGC back to topCoding sequence (CDS) from alignment at ch5:3209322..3210566+ >KJC3_007727-T2 ID=KJC3_007727-T2|Name=KJC3_007727-T2|organism=Aspergillus niger KJC3|type=CDS|length=2520bp|location=Sequence derived from alignment at ch5:3209322..3210566+ (Aspergillus niger KJC3)
ATGTGGATTGACACAGACGTGTGGGAGCTTCCAGAAAATGTTATTTACGA
GCTCTACAGCCAACCAACGCGCGGTCCTGGAGCGCAGGGTTCCTATCTGG
TCGTCCTACCACCGGGCTACGATGATCGTGATGTAAACGGCGAGCGATAC
CCCGTACTATACTGGCTTCATGGGGGCTTTTCATGCTCGCGCCATGCGAT
GTGGTCCCTCCAATTCTATGCACGCAAAATAGAGCTGGGCACTATGCCCA
AGGTAATTCTGGTGGCACCGCAGTCATTGCCAAAAGGCCGCTGGATCAAC
AGCTACGACGGCAGCCGCCGCCTTGGGGACATCATGCGCCATGATCTCGT
CACAGCTATTGATGAGCGGTACAGGACCATTAGACATCCATCAGCACGTT
GGCTAGAGGGTCACTCAGCGGGCGGTTATGGTGCCTTCAACCTCGGTCTC
AAGTATCCCGATGTTTTCGGAGGCGCCTTGTCGTCGCTTGCTGGCTCATT
CCGAACCGAATTAGCCAAGGAAGGCCTCGAGGTCACCTACGACACTTACA
ACGGCTCGCAGGCCTTTTTCACTTCTAATCATGCTCTCACGCTGCTGAAG
GCCATCCTCCCTCGGGTCCATCGCGACAAGCCGGAGCTGCGGCTGCTCAT
TGGCGGCGAGGACATTAGACTACGTGAAGCACACGAGCACATGTGGACCA
GCTTGGATGCTCTGGGCGTGCCATATATGAAAGCTATTGTCCCGGGAGCT
CCCCACACCGCAGAGCATGTCCTGGGCGGCCTGAACAACGAAGGTCTCCA
GTTCTGGTGGAACGCACGGGCAAAGGTTATTGAGGCCTGAATGTGGATTG
ACACAGACGTGTGGGAGCTTCCAGAAAATGTTATTTACGAGCTCTACAGC
CAACCAACGCGCGGTCCTGGAGCGCAGGGTTCCTATCTGGTCGTCCTACC
ACCGGGCTACGATGATCGTGATGTAAACGGCGAGCGATACCCCGTACTAT
ACTGGCTTCATGGGGGCTTTTCATGCTCGCGCCATGCGATGTGGTCCCTC
CAATTCTATGCACGCAAAATAGAGCTGGGCACTATGCCCAAGGTAATTCT
GGTGGCACCGCAGTCATTGCCAAAAGGCCGCTGGATCAACAGCTACGACG
GCAGCCGCCGCCTTGGGGACATCATGCGCCATGATCTCGTCACAGCTATT
GATGAGCGGTACAGGACCATTAGACATCCATCAGCACGTTGGCTAGAGGG
TCACTCAGCGGGCGGTTATGGTGCCTTCAACCTCGGTCTCAAGTATCCCG
ATGTTTTCGGAGGCGCCTTGTCGTCGCTTGCTGGCTCATTCCGAACCGAA
TTAGCCAAGGAAGGCCTCGAGGTCACCTACGACACTTACAACGGCTCGCA
GGCCTTTTTCACTTCTAATCATGCTCTCACGCTGCTGAAGGCCATCCTCC
CTCGGGTCCATCGCGACAAGCCGGAGCTGCGGCTGCTCATTGGCGGCGAG
GACATTAGACTACGTGAAGCACACGAGCACATGTGGACCAGCTTGGATGC
TCTGGGCGTGCCATATATGAAAGCTATTGTCCCGGGAGCTCCCCACACCG
CAGAGCATGTCCTGGGCGGCCTGAACAACGAAGGTCTCCAGTTCTGGTGG
AACGCACGGGCAAAGGTTATTGAGGCCTGAATGTGGATTGACACAGACGT
GTGGGAGCTTCCAGAAAATGTTATTTACGAGCTCTACAGCCAACCAACGC
GCGGTCCTGGAGCGCAGGGTTCCTATCTGGTCGTCCTACCACCGGGCTAC
GATGATCGTGATGTAAACGGCGAGCGATACCCCGTACTATACTGGCTTCA
TGGGGGCTTTTCATGCTCGCGCCATGCGATGTGGTCCCTCCAATTCTATG
CACGCAAAATAGAGCTGGGCACTATGCCCAAGGTAATTCTGGTGGCACCG
CAGTCATTGCCAAAAGGCCGCTGGATCAACAGCTACGACGGCAGCCGCCG
CCTTGGGGACATCATGCGCCATGATCTCGTCACAGCTATTGATGAGCGGT
ACAGGACCATTAGACATCCATCAGCACGTTGGCTAGAGGGTCACTCAGCG
GGCGGTTATGGTGCCTTCAACCTCGGTCTCAAGTATCCCGATGTTTTCGG
AGGCGCCTTGTCGTCGCTTGCTGGCTCATTCCGAACCGAATTAGCCAAGG
AAGGCCTCGAGGTCACCTACGACACTTACAACGGCTCGCAGGCCTTTTTC
ACTTCTAATCATGCTCTCACGCTGCTGAAGGCCATCCTCCCTCGGGTCCA
TCGCGACAAGCCGGAGCTGCGGCTGCTCATTGGCGGCGAGGACATTAGAC
TACGTGAAGCACACGAGCACATGTGGACCAGCTTGGATGCTCTGGGCGTG
CCATATATGAAAGCTATTGTCCCGGGAGCTCCCCACACCGCAGAGCATGT
CCTGGGCGGCCTGAACAACGAAGGTCTCCAGTTCTGGTGGAACGCACGGG
CAAAGGTTATTGAGGCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007727-T2.utr5p1 | KJC3_007727-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007727-T2.utr3p1 | KJC3_007727-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:CE1 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000801 |
| DBxref | PFAM:PF00756 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3209322..3210566 + |
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