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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3217565..3219510+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007730-T2 ID=KJC3_007730-T2|Name=KJC3_007730-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1946bp|location=Sequence derived from alignment at ch5:3217565..3219510+ (Aspergillus niger KJC3)
CGTCCGAGCGTCTGGCTCAGTAGACAATCCCACTTTACTTTTATTACGGG
GCTTCCTAGGTGTAGTTTCCGTCAGACGACGGCGCCAAAGGTACAAGCCG
GGTCTTTATTGTTTTACTATCACTGCGCTTCCCTTAGGAGAGGAATACAT
ACATGAAAATGACTTCCTCGTTGCCGCCAGTCGTCGTCAATGGAGGGCTG
ATTGAGGGCAAGACAAGTGACGTGGATGCCTCAATCACCCTCTACCTCGG
GATCCCCTATGCCGCTCCGCCCACTGGGCCCCGTCGATTCCAACCTCCAC
AGCCTGTACTTCCATGGGATGGGGTCAAGCAATGCCATCAGATCGGACCC
ATCTGTCCACAGGCACCCCCTGACCCCCGCTGGATCAATGTTCTCCAAGG
TCATCCACAGTCTGAGGATTGTCTCTACCTCAACGTGTTCCAGCCCGGTG
AAGCGCATGAGAAGCCATATCCTGTGTTCGTCTGGTTCCATGGAGGTGGC
TTTCGGGAGGGTGGCAGTGCTGATCCTAACTTTGATGGCACGGCTCTAGC
AAAGAAGGGCCTTATTGTTGTGGTCCCTTCATTCCGACTTTGTAAGTGCA
CGCCTGAATATTTCTTGGGATAAGGAAGCTATGCGCGAGTTCTGACGTTC
AAACTACTAGCCATCTTCGGCTATTACGCCCATCCAGAACTGAGCGCCGA
GTCCCCGTCAGGCACGTCCGGAATGATGGGCATGCTCGATGCGATCGAGG
TGCTTCGCTGGGTGCAGTCCAATATTGCAGCATTTGGGGGAAATCCCAAC
CAAGTGACGATAGGAGGACAGTCGGCAGGTAATGCCATGTGTCACACCCT
ACTTGTGTCGCCTCTGGCGAGGAATCTCCTTCATGGTGTTATTCTGCAGT
CCGGACCTCGGTCACTTCAGGAGCCGGCCGTGGCTAATGGACCCATGTCA
TATCGTACCCTACAGCAGGCAGAGGAGGATGGCGTGCAGCTGCTCAGGGA
GCTGGGGTTGCAGTCAATCGAAGAGCTCCGGGAATTCAATGACATAGACA
AGCTGTGCGAGTTGTCCACCAGAAGAGATCATCGCTGCTGGGGCCCCCCG
CCACTATTTCGGTTGACCCTCGATGGACATGTCATCCCAAAGCCCTGGCA
CCAGATGCTGGCAGAGGGTCCGTCTAATGACGTCCCGATCCTAGCTGGCA
TGAACAGCGAAGAGGGCGGTACCTACAATGAGCCCCGCTTCACGTACGAT
GATTTCGTTGAATGTGTTGAGAGTCGTTTTGGACCGCATTCGACATACGG
TCAAGGGGACTCGAAGTGGGTGAAACGATTCCATGAACTCTACAGCCCTA
CAGACCATGAAACCGGGAAGGGTCCTCTGGACGCGTGGAACAGGGCTGCT
CGGGATAACACGCGCAACAATATTGCGCTCTGGGCCCAGGAGTATCATCA
GAAAACAGCCTCGCCCGTGTACGGGTACTACTTCACCCATCCCATCCCCC
CCTGGAACAACTGGCAGCCAGATTACTCGCAGCCAAAGGTTCCTGGATTT
ACGAACCAGAAAGGCCCTGTTACGGGGGCTTATCATGGTGCGGAATTTGC
ATACACATTCAACAGCCTCACTACCAATAACCTCCGACCCTGGAGCAACA
CCGATCGCATTGTCGGCGAAAAAGTGTCCACGCTTTGGGCCAACTTTGTC
AAGCACGGCAATCCAAACGGTCCTCCTGGGGAGAATAAGGGTCCAGAAGG
CGTTGCCTTCTGGCCAAACCTCAATGACCACCCCCACACTTTGTTGGAGC
TAGGTGGGGAGTGGCAGACAATACGGACCACGGACCCGGAAAACGAACAA
TTCTGGACAAGCTATGTTCGATCTCAGAAGGCCTGGTAGACGCAATTTAT
CCGCAAATCAAATTAGCGCGCACGTAGGACTTACTACCGAGCCCGG back to topCoding sequence (CDS) from alignment at ch5:3217565..3219510+ >KJC3_007730-T2 ID=KJC3_007730-T2|Name=KJC3_007730-T2|organism=Aspergillus niger KJC3|type=CDS|length=4563bp|location=Sequence derived from alignment at ch5:3217565..3219510+ (Aspergillus niger KJC3)
ATGCCTCAATCACCCTCTACCTCGGGATCCCCTATGCCGCTCCGCCCACT
GGGCCCCGTCGATTCCAACCTCCACAGCCTGTACTTCCATGGGATGGGGT
CAAGCAATGCCATCAGATCGGACCCATCTGTCCACAGGCACCCCCTGACC
CCCGCTGGATCAATGTTCTCCAAGGTCATCCACAGTCTGAGGATTGTCTC
TACCTCAACGTGTTCCAGCCCGGTGAAGCGCATGAGAAGCCATATCCTGT
CAAAGAAGGGCCTTATTGTTGTGGTCCCTTCATTCCGACTTTCCATCTTC
GGCTATTACGCCCATCCAGAACTGAGCGCCGAGTCCCCGTCAGGCACGTC
CGGAATGATGGGCATGCTCGATGCGATCGAGGTGCTTCGCTGGGTGCAGT
CCAATATTGCAGCATTTGGGGGAAATCCCAACCAAGTGACGATAGGAGGA
CAGTCGGCAGGTAATGCCATGTGTCACACCCTACTTGTGTCGCCTCTGGC
GAGGAATCTCCTTCATGGTGTTATTCTGCAGTCCGGACCTCGGTCACTTC
AGGAGCCGGCCGTGGCTAATGGACCCATGTCATATCGTACCCTACAGCAG
GCAGAGGAGGATGGCGTGCAGCTGCTCAGGGAGCTGGGGTTGCAGTCAAT
CGAAGAGCTCCGGGAATTCAATGACATAGACAAGCTGTGCGAGTTGTCCA
CCAGAAGAGATCATCGCTGCTGGGGCCCCCCGCCACTATTTCGGTTGACC
CTCGATGGACATGTCATCCCAAAGCCCTGGCACCAGATGCTGGCAGAGGG
TCCGTCTAATGACGTCCCGATCCTAGCTGGCATGAACAGCGAAGAGGGCG
GTACCTACAATGAGCCCCGCTTCACGTACGATGATTTCGTTGAATGTGTT
GAGAGTCGTTTTGGACCGCATTCGACATACGGTCAAGGGGACTCGAAGTG
GGTGAAACGATTCCATGAACTCTACAGCCCTACAGACCATGAAACCGGGA
AGGGTCCTCTGGACGCGTGGAACAGGGCTGCTCGGGATAACACGCGCAAC
AATATTGCGCTCTGGGCCCAGGAGTATCATCAGAAAACAGCCTCGCCCGT
GTACGGGTACTACTTCACCCATCCCATCCCCCCCTGGAACAACTGGCAGC
CAGATTACTCGCAGCCAAAGGTTCCTGGATTTACGAACCAGAAAGGCCCT
GTTACGGGGGCTTATCATGGTGCGGAATTTGCATACACATTCAACAGCCT
CACTACCAATAACCTCCGACCCTGGAGCAACACCGATCGCATTGTCGGCG
AAAAAGTGTCCACGCTTTGGGCCAACTTTGTCAAGCACGGCAATCCAAAC
GGTCCTCCTGGGGAGAATAAGGGTCCAGAAGGCGTTGCCTTCTGGCCAAA
CCTCAATGACCACCCCCACACTTTGTTGGAGCTAGGTGGGGAGTGGCAGA
CAATACGGACCACGGACCCGGAAAACGAACAATTCTGGACAAGCTATGTT
CGATCTCAGAAGGCCTGGTAGATGCCTCAATCACCCTCTACCTCGGGATC
CCCTATGCCGCTCCGCCCACTGGGCCCCGTCGATTCCAACCTCCACAGCC
TGTACTTCCATGGGATGGGGTCAAGCAATGCCATCAGATCGGACCCATCT
GTCCACAGGCACCCCCTGACCCCCGCTGGATCAATGTTCTCCAAGGTCAT
CCACAGTCTGAGGATTGTCTCTACCTCAACGTGTTCCAGCCCGGTGAAGC
GCATGAGAAGCCATATCCTGTCAAAGAAGGGCCTTATTGTTGTGGTCCCT
TCATTCCGACTTTCCATCTTCGGCTATTACGCCCATCCAGAACTGAGCGC
CGAGTCCCCGTCAGGCACGTCCGGAATGATGGGCATGCTCGATGCGATCG
AGGTGCTTCGCTGGGTGCAGTCCAATATTGCAGCATTTGGGGGAAATCCC
AACCAAGTGACGATAGGAGGACAGTCGGCAGGTAATGCCATGTGTCACAC
CCTACTTGTGTCGCCTCTGGCGAGGAATCTCCTTCATGGTGTTATTCTGC
AGTCCGGACCTCGGTCACTTCAGGAGCCGGCCGTGGCTAATGGACCCATG
TCATATCGTACCCTACAGCAGGCAGAGGAGGATGGCGTGCAGCTGCTCAG
GGAGCTGGGGTTGCAGTCAATCGAAGAGCTCCGGGAATTCAATGACATAG
ACAAGCTGTGCGAGTTGTCCACCAGAAGAGATCATCGCTGCTGGGGCCCC
CCGCCACTATTTCGGTTGACCCTCGATGGACATGTCATCCCAAAGCCCTG
GCACCAGATGCTGGCAGAGGGTCCGTCTAATGACGTCCCGATCCTAGCTG
GCATGAACAGCGAAGAGGGCGGTACCTACAATGAGCCCCGCTTCACGTAC
GATGATTTCGTTGAATGTGTTGAGAGTCGTTTTGGACCGCATTCGACATA
CGGTCAAGGGGACTCGAAGTGGGTGAAACGATTCCATGAACTCTACAGCC
CTACAGACCATGAAACCGGGAAGGGTCCTCTGGACGCGTGGAACAGGGCT
GCTCGGGATAACACGCGCAACAATATTGCGCTCTGGGCCCAGGAGTATCA
TCAGAAAACAGCCTCGCCCGTGTACGGGTACTACTTCACCCATCCCATCC
CCCCCTGGAACAACTGGCAGCCAGATTACTCGCAGCCAAAGGTTCCTGGA
TTTACGAACCAGAAAGGCCCTGTTACGGGGGCTTATCATGGTGCGGAATT
TGCATACACATTCAACAGCCTCACTACCAATAACCTCCGACCCTGGAGCA
ACACCGATCGCATTGTCGGCGAAAAAGTGTCCACGCTTTGGGCCAACTTT
GTCAAGCACGGCAATCCAAACGGTCCTCCTGGGGAGAATAAGGGTCCAGA
AGGCGTTGCCTTCTGGCCAAACCTCAATGACCACCCCCACACTTTGTTGG
AGCTAGGTGGGGAGTGGCAGACAATACGGACCACGGACCCGGAAAACGAA
CAATTCTGGACAAGCTATGTTCGATCTCAGAAGGCCTGGTAGATGCCTCA
ATCACCCTCTACCTCGGGATCCCCTATGCCGCTCCGCCCACTGGGCCCCG
TCGATTCCAACCTCCACAGCCTGTACTTCCATGGGATGGGGTCAAGCAAT
GCCATCAGATCGGACCCATCTGTCCACAGGCACCCCCTGACCCCCGCTGG
ATCAATGTTCTCCAAGGTCATCCACAGTCTGAGGATTGTCTCTACCTCAA
CGTGTTCCAGCCCGGTGAAGCGCATGAGAAGCCATATCCTGTCAAAGAAG
GGCCTTATTGTTGTGGTCCCTTCATTCCGACTTTCCATCTTCGGCTATTA
CGCCCATCCAGAACTGAGCGCCGAGTCCCCGTCAGGCACGTCCGGAATGA
TGGGCATGCTCGATGCGATCGAGGTGCTTCGCTGGGTGCAGTCCAATATT
GCAGCATTTGGGGGAAATCCCAACCAAGTGACGATAGGAGGACAGTCGGC
AGGTAATGCCATGTGTCACACCCTACTTGTGTCGCCTCTGGCGAGGAATC
TCCTTCATGGTGTTATTCTGCAGTCCGGACCTCGGTCACTTCAGGAGCCG
GCCGTGGCTAATGGACCCATGTCATATCGTACCCTACAGCAGGCAGAGGA
GGATGGCGTGCAGCTGCTCAGGGAGCTGGGGTTGCAGTCAATCGAAGAGC
TCCGGGAATTCAATGACATAGACAAGCTGTGCGAGTTGTCCACCAGAAGA
GATCATCGCTGCTGGGGCCCCCCGCCACTATTTCGGTTGACCCTCGATGG
ACATGTCATCCCAAAGCCCTGGCACCAGATGCTGGCAGAGGGTCCGTCTA
ATGACGTCCCGATCCTAGCTGGCATGAACAGCGAAGAGGGCGGTACCTAC
AATGAGCCCCGCTTCACGTACGATGATTTCGTTGAATGTGTTGAGAGTCG
TTTTGGACCGCATTCGACATACGGTCAAGGGGACTCGAAGTGGGTGAAAC
GATTCCATGAACTCTACAGCCCTACAGACCATGAAACCGGGAAGGGTCCT
CTGGACGCGTGGAACAGGGCTGCTCGGGATAACACGCGCAACAATATTGC
GCTCTGGGCCCAGGAGTATCATCAGAAAACAGCCTCGCCCGTGTACGGGT
ACTACTTCACCCATCCCATCCCCCCCTGGAACAACTGGCAGCCAGATTAC
TCGCAGCCAAAGGTTCCTGGATTTACGAACCAGAAAGGCCCTGTTACGGG
GGCTTATCATGGTGCGGAATTTGCATACACATTCAACAGCCTCACTACCA
ATAACCTCCGACCCTGGAGCAACACCGATCGCATTGTCGGCGAAAAAGTG
TCCACGCTTTGGGCCAACTTTGTCAAGCACGGCAATCCAAACGGTCCTCC
TGGGGAGAATAAGGGTCCAGAAGGCGTTGCCTTCTGGCCAAACCTCAATG
ACCACCCCCACACTTTGTTGGAGCTAGGTGGGGAGTGGCAGACAATACGG
ACCACGGACCCGGAAAACGAACAATTCTGGACAAGCTATGTTCGATCTCA
GAAGGCCTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007730-T2.utr5p1 | KJC3_007730-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007730-T2.utr3p1 | KJC3_007730-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0034727 |
| DBxref | InterPro:IPR019826 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR002018 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3217565..3219510 + |
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