|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:98404..101023- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007771-T1 ID=KJC3_007771-T1|Name=KJC3_007771-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2620bp|location=Sequence derived from alignment at ch6:98404..101023- (Aspergillus niger KJC3)
TGAGAGTACCACTTTTCTCCCTCTACCAAGCCTTGAAATAGGTCAGGGCC
GTTCATGGGACCCTGACCTCCACCCCTTCGGAAGCCAGCCGGATTGCTTC
TAAGACATCCTGAAGTGGGCCACCATCCGGCTCTCACCATTCCTATGTTC
TGCCAAGCGACTCGACCTCGTTCTTCACCGGAGTTCCCGGGTCCGCCCTG
AACTCAAGGTCTGCATGGGAAGAGATTTCCGGCTGTTCCCCCCAACGGCG
TCTAGGCAGATAGGCTAGGCGTTTTGTTCCTGGCTTGATCAGCAAGGTTT
ATCATAGTCCTCATGACTCGTAAAACCCAAGAAGATAAAATGAAGATGTT
GGGTCCGCGAGTCCGGTGATGTCTGGGCAGCAGTAGTAACACTCTAAAAT
ATAAGCCACCACACCCACTGACAGGTTAATCTCCGGTAGAAGAACCAAGA
CCTGCCTGCCAAGCCACATTGATTGGGTTCTCATCCATTTCAGGTCCTGT
CCCCGGTCCTCTCGTGTCATTCCAGAACATGGTCGAGAAATCAAACGGCC
ACTGTCTGACTGCCAGCTCCACCATCATGTAATCCGGCTTCTCTATATAA
ACTTGGAAATGTTCCCCTCTCCTGTGGCTCTAGAAGAAGACATCACCCTC
TTTGCTTCTACAAGCCTGTCACTCTTTCCAGGCAGTCGTTCTTTGATCAT
TCTTACTAAACGTTCATTCTTTTGGGATTTTCTTTTTGTTTTCCTTTAAA
TCTTCGGTACTTTGAGAGTCCAACATGCACTACAAGCTGCTTTTCGCTGC
TGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGCGTTGTTGGCG
CCGCCGAGGGTTTCGCCCACGGTGTCACTGGTGGTGGCAGCGCTTCCCCC
GTCTATCCCACGACTACTGATGAGCTGGTCTCTTACCTCGGTGATAACGA
ACCTCGGGTGATCATCCTGGACAGAACGTAGGTCCATCAAACCGAGATTC
AGGGGCAGAAATTTGACTAATATGTTGATATTTCAGCTTCGACTTTACCG
GCACCGAGGGTACCGAGACTACCACCGGATGTGCCCCCTGGGGAACTGCT
TCCCAATGCCAGGTGGCGATCAACCTGCACAGCTGGTGTGACAACTACCA
GGCCAGCGCCCCCAAGGTATCCGTGACTTAGTATGTTGCCCTCGTTCAAT
TGATGGCCAAGTCTTTTCATGCTGAGAGCCGTGTAGTGACAAGGCGGGTA
TCCTCCCCATCACGGTCAACTCCAACAAGAGTATTGTTGGTCAGGGCACC
AAGGGTGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGAA
CGTCATCATCCAGTGAGTGCAGCCCCTCGGTTGAGGGATATGAATCCACC
CTTGCTAATAACGGCCAGGAACATTGCCGTCACCGACATCAACCCCAAGT
ATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGGTCTGG
ATCGACCATGTGACAACTGCTCGCATTGGTCGCCAGCACATCGTCCTGGG
CACCAGCGCCGACAACCGCGTCACCATCTCCTATTCCCTCATCGATGGTC
GCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCGTGTAC
CTGGACGGCAGCAACGACATGGTAACCCTCAAGGGCAACTATTTCTACAA
CCTCAGTGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCG
TATGTCGCCTCGAGCCTCCTATACAATCTGCACATTACTGACTACTCTAA
CTACAGGTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCGAGAT
CGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTA
ACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGAT
GCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCT
CAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCA
TCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAAC
ATTGCCCAGTGGACCATGAAGAACGCTGGCCAGGGCAAATAAGGTTTTCA
AAGCAGAACAATTCTGTGAAGGAGGCCGGCCAAAGTTCAGATGGAGATAG
AGGGCACCTGCTTCGACATCTATAGTTCAATAGTCCAGGATCATAGACGA
ATGATTATCACTCCAGAATGGTGAAACACTCTTAAGCAGACCATGACGCG
CACGCAACATAGCCCGCTCCATGTTACTGACTGCGACTGTATTTGGAGAA
TTAAGGAAAGCTAAATGAAAGTATATACTACAAAACCGCCATAACAGCAA
CCGACGCCCTGAGTCACAGTGGCATCAATGCCGGGTAGGCTTCTTGGTAC
GGTGAGCCAGATGCCTTCGATCCAACGCGGGCGAACTAGTCAATCAATGT
ACGTACGTAAAGTGATCGAGCGTGTGAGTCCATATCTTTCAGGGCGCCTA
GGGTAACGCCACAATTGAATTTACTCCCAGCATAGAAGGAGACTTCGCAT
GAGACATCAATTTATCTGCA back to topCoding sequence (CDS) from alignment at ch6:98404..101023- >KJC3_007771-T1 ID=KJC3_007771-T1|Name=KJC3_007771-T1|organism=Aspergillus niger KJC3|type=CDS|length=5700bp|location=Sequence derived from alignment at ch6:98404..101023- (Aspergillus niger KJC3)
GTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCGAGATCGGCAC
TGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAACACTG
TGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGATGCCAAC
ACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGC
CTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATCAGCA
AGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAACATTGCC
CAGTGGACCATGAAGAACGCTGGCCAGGGCAAATAAGAACATTGCCGTCA
CCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGAT
GACTCTGATCTGGTCTGGATCGACCATGTGACAACTGCTCGCATTGGTCG
CCAGCACATCGTCCTGGGCACCAGCGCCGACAACCGCGTCACCATCTCCT
ATTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCAC
CACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTAACCCTCAA
GGGCAACTATTTCTACAACCTCAGTGGCCGCATGCCCAAGGTTCAGGGTA
ACACTCTGCTGCACGCCTGACAAGGCGGGTATCCTCCCCATCACGGTCAA
CTCCAACAAGAGTATTGTTGGTCAGGGCACCAAGGGTGTCATCAAGGGCA
AGGGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCATCCACTTCGAC
TTTACCGGCACCGAGGGTACCGAGACTACCACCGGATGTGCCCCCTGGGG
AACTGCTTCCCAATGCCAGGTGGCGATCAACCTGCACAGCTGGTGTGACA
ACTACCAGGCCAGCGCCCCCAAGGTATCCGTGACTTAATGCACTACAAGC
TGCTTTTCGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCC
GGCGTTGTTGGCGCCGCCGAGGGTTTCGCCCACGGTGTCACTGGTGGTGG
CAGCGCTTCCCCCGTCTATCCCACGACTACTGATGAGCTGGTCTCTTACC
TCGGTGATAACGAACCTCGGGTGATCATCCTGGACAGAACGTGAACAACC
TCTTCCACAACTTTGACGGCCACGCCTTCGAGATCGGCACTGGTGGCTAC
GTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAACACTGTGGTGGAGAC
GCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGATGCCAACACCAACCAGC
AGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAAC
TCCGGCTCGATGTCCGGATCGGACACCAGCATCATCAGCAAGTTCGCTGG
CAAGACCATTGCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGGACCA
TGAAGAACGCTGGCCAGGGCAAATAAGAACATTGCCGTCACCGACATCAA
CCCCAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATC
TGGTCTGGATCGACCATGTGACAACTGCTCGCATTGGTCGCCAGCACATC
GTCCTGGGCACCAGCGCCGACAACCGCGTCACCATCTCCTATTCCCTCAT
CGATGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGG
GCGTGTACCTGGACGGCAGCAACGACATGGTAACCCTCAAGGGCAACTAT
TTCTACAACCTCAGTGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCT
GCACGCCTGACAAGGCGGGTATCCTCCCCATCACGGTCAACTCCAACAAG
AGTATTGTTGGTCAGGGCACCAAGGGTGTCATCAAGGGCAAGGGTCTCCG
TGTGGTCAGCGGTGCCAAGAACGTCATCATCCACTTCGACTTTACCGGCA
CCGAGGGTACCGAGACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCC
CAATGCCAGGTGGCGATCAACCTGCACAGCTGGTGTGACAACTACCAGGC
CAGCGCCCCCAAGGTATCCGTGACTTAATGCACTACAAGCTGCTTTTCGC
TGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGCGTTGTTG
GCGCCGCCGAGGGTTTCGCCCACGGTGTCACTGGTGGTGGCAGCGCTTCC
CCCGTCTATCCCACGACTACTGATGAGCTGGTCTCTTACCTCGGTGATAA
CGAACCTCGGGTGATCATCCTGGACAGAACGTGAACAACCTCTTCCACAA
CTTTGACGGCCACGCCTTCGAGATCGGCACTGGTGGCTACGTCCTGGCCG
AGGGTAACGTCTTCCAGGACGTTAACACTGTGGTGGAGACGCCCATCAGC
GGCCAGCTCTTCAGCTCCCCCGATGCCAACACCAACCAGCAGTGCGCCTC
CGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGA
TGTCCGGATCGGACACCAGCATCATCAGCAAGTTCGCTGGCAAGACCATT
GCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGGACCATGAAGAACGC
TGGCCAGGGCAAATAAGAACATTGCCGTCACCGACATCAACCCCAAGTAT
GTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGGTCTGGAT
CGACCATGTGACAACTGCTCGCATTGGTCGCCAGCACATCGTCCTGGGCA
CCAGCGCCGACAACCGCGTCACCATCTCCTATTCCCTCATCGATGGTCGC
TCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCGTGTACCT
GGACGGCAGCAACGACATGGTAACCCTCAAGGGCAACTATTTCTACAACC
TCAGTGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCTGA
CAAGGCGGGTATCCTCCCCATCACGGTCAACTCCAACAAGAGTATTGTTG
GTCAGGGCACCAAGGGTGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGC
GGTGCCAAGAACGTCATCATCCACTTCGACTTTACCGGCACCGAGGGTAC
CGAGACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGG
TGGCGATCAACCTGCACAGCTGGTGTGACAACTACCAGGCCAGCGCCCCC
AAGGTATCCGTGACTTAATGCACTACAAGCTGCTTTTCGCTGCTGCCGCA
GCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGCGTTGTTGGCGCCGCCGA
GGGTTTCGCCCACGGTGTCACTGGTGGTGGCAGCGCTTCCCCCGTCTATC
CCACGACTACTGATGAGCTGGTCTCTTACCTCGGTGATAACGAACCTCGG
GTGATCATCCTGGACAGAACGTGAACAACCTCTTCCACAACTTTGACGGC
CACGCCTTCGAGATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGT
CTTCCAGGACGTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCT
TCAGCTCCCCCGATGCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGT
CGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATC
GGACACCAGCATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTC
ACCCCCCGGGTAACATTGCCCAGTGGACCATGAAGAACGCTGGCCAGGGC
AAATAAGAACATTGCCGTCACCGACATCAACCCCAAGTATGTCTGGGGTG
GTGATGCCATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTG
ACAACTGCTCGCATTGGTCGCCAGCACATCGTCCTGGGCACCAGCGCCGA
CAACCGCGTCACCATCTCCTATTCCCTCATCGATGGTCGCTCCGACTACT
CTGCCACCTGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGC
AACGACATGGTAACCCTCAAGGGCAACTATTTCTACAACCTCAGTGGCCG
CATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCTGACAAGGCGGGT
ATCCTCCCCATCACGGTCAACTCCAACAAGAGTATTGTTGGTCAGGGCAC
CAAGGGTGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGA
ACGTCATCATCCACTTCGACTTTACCGGCACCGAGGGTACCGAGACTACC
ACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCGATCAA
CCTGCACAGCTGGTGTGACAACTACCAGGCCAGCGCCCCCAAGGTATCCG
TGACTTAATGCACTACAAGCTGCTTTTCGCTGCTGCCGCAGCATCCTTGG
CCAGCGCTGTCAGTGCCGCCGGCGTTGTTGGCGCCGCCGAGGGTTTCGCC
CACGGTGTCACTGGTGGTGGCAGCGCTTCCCCCGTCTATCCCACGACTAC
TGATGAGCTGGTCTCTTACCTCGGTGATAACGAACCTCGGGTGATCATCC
TGGACAGAACGTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCG
AGATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGAC
GTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCC
CGATGCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCC
AGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGC
ATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGG
TAACATTGCCCAGTGGACCATGAAGAACGCTGGCCAGGGCAAATAAGAAC
ATTGCCGTCACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCCAT
TACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACAACTGCTC
GCATTGGTCGCCAGCACATCGTCCTGGGCACCAGCGCCGACAACCGCGTC
ACCATCTCCTATTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACCTG
CAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGG
TAACCCTCAAGGGCAACTATTTCTACAACCTCAGTGGCCGCATGCCCAAG
GTTCAGGGTAACACTCTGCTGCACGCCTGACAAGGCGGGTATCCTCCCCA
TCACGGTCAACTCCAACAAGAGTATTGTTGGTCAGGGCACCAAGGGTGTC
ATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCAT
CCACTTCGACTTTACCGGCACCGAGGGTACCGAGACTACCACCGGATGTG
CCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCGATCAACCTGCACAGC
TGGTGTGACAACTACCAGGCCAGCGCCCCCAAGGTATCCGTGACTTAATG
CACTACAAGCTGCTTTTCGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGT
CAGTGCCGCCGGCGTTGTTGGCGCCGCCGAGGGTTTCGCCCACGGTGTCA
CTGGTGGTGGCAGCGCTTCCCCCGTCTATCCCACGACTACTGATGAGCTG
GTCTCTTACCTCGGTGATAACGAACCTCGGGTGATCATCCTGGACAGAAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007771-T1.utr3p1 | KJC3_007771-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007771-T1.utr5p1 | KJC3_007771-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_4 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:98404..101023 - |
|
