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KJC3_007790-T1, KJC3_007790-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007790-T1
Unique NameKJC3_007790-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:136880..139366+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007790-T1 ID=KJC3_007790-T1|Name=KJC3_007790-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2487bp|location=Sequence derived from alignment at ch6:136880..139366+ (Aspergillus niger KJC3)
TGAATAATTGAACCTTTCCCCTGTTCCCACTTTCCCCGAGCTCGTCTTTC
TTCCGCCGAGTAATAACTAGCTACTCAACCACACTCCCCGCATGGAGCAT
TCCGGAGCGTCCTCGCCTAGTATAGTATCTAGTCAAGATCCCAGCGCTAT
GTCGACAAGAGTGTGCGATAGGTGCATCCGGTAACCCGCCTCTCCCTCGG
CCTTTCATGTGTCACTAAGCTTCTGCGCAGGAAGAAGATCAAGTGTACGT
CGGCGCTTTCACTCGGTCTGGAGGTATTAGTCGCTAAACACCCGTAGGCA
ATTTGGCCCGGCCAACTTGCTCTCGTTGCTCCGACCTGGGCAAGACCTGC
ACTTATTCGCTGGTGAAACGGAGGCCCGGTCCTCCTCGTGGCTCTCGCTA
CACCACCCGCCGACCCAGATCGCGCACTCCCTCTGGTAGCTCCACCTTCA
TATTATGATTTTGGGAAATATTTAGTTACTGAGTAAATGATGATCCTGAC
AAAGCAACCCCGGAACGCAGCGTCACACTACAAGAGTCTGACCCGGTGAT
TTCCCCGCCAGGTGAATCGGTTTCCAGTGAGCAAGTGGCGCAGGGAGCCC
CTCTGCAACACCCAAGCACCACTAGCCCTTCATGTTCTCGTCACTTGCCT
TTCTCCTCGCAGGACGAGGAGCACCTGTATGTCACCTTCCTTGCCAGACA
GAGCCAAACTGACAAGTTTTGGTACCGCTGCAGAATTGAGTGTTTCTTTG
ACATCGCCCAAGATGCAAATCCTATCTACTCGAAGAAACGCTTTCTTCAT
CGATATAGAAGCTCACAATGCAGTCAAGACCTTATCACGGCAGTGGCTCT
CATTGCCGCAAATCTCACCCAGTTCTCCGTGGGTGATGGTGGTCCAAACT
TAGATGCAGAGCTTGACTCACTCCTCAGCTCAAGCCTGCTCGAAGATGAC
CTAGTCGGGGATACCCCATCCCTCGACCAGTTTCGCAAAGCCTACATACT
GGCCCTCTATGAGTTCCATCAGTTCCCAGGCCATCACTCCTGGCTGCGTA
TTGGACGGGTCACACGCATGGCCTATCGAATTGGCCTAGACCGACTCGAG
CACATCCGCGTGCTCTACGCCGACTGGAGCACGGTCAGCGACGAAGATAT
CCAGGAGTGGCGGGCTCTCTGGTGGCGCATCTACCGCCTCGACACCTACG
CCAATCTTGCCTCTGGCACACCGTATCTCATCGACGACACCTTAATCGAC
ACCTCTTTCAATCTCAGCCAAACAGCAAACCCTTCTCATGCAATCTTCCT
TCCTCCTAACTCAGCTGGTCTCGCCGAGCTCCTCCCCGCCATTACCTCAG
ACCCTGAAACCCTCCTAGACAATATCCACAACATCACCATCGCATCCATG
CGCCAAGCCGGTCTTATGATCCGCATCCACATGCTCCGCTGGCAAGCCGG
GATGCTATCACAGATCACTGCCGTCGATCGCCAACTAACAACCCTGCGCC
TCGCCCTACCACCCGGCTGGCTCAACCCGCACCGCAACGCCTTCATCAAC
GAGAGCCCGCTCGCCCACCACGCGCGGCTCATAACAGTCTACCACCTTCG
CATGGCGCAGCTGCTCCTCTCCGTTGCAGAGTGCAGCGCCCGGCGCGCAG
ACGACTGGCTCTCAGCCTGGCAGCGCGTCCTGGAGACATGTCAGGATATC
GCTGGGTTGGCGAGTCAGTGGGACAGCGCATATTGCATGACGGTCGACCC
GGCCATCACGTTTACCATCTTCACAACACTCATATTTCTTGATCTTCAAA
GGAAGTGCGAGCTAGTGGCAACCGATGATCTCCGTTCGAGCATTGACCAT
GACATCACCGTGCTGCATCTGCAGCTTAAACACTTCGGGACCATATGGAC
GCAGGCGAGGCTGCTTACTTGTAAGGTTCCCACCTCCTTCAGGCATGTAT
GGTAGTACCATGGGCTAACACTAGGGCGGCGTATAGTGTCATTCGAAAGC
TTCAGTGAATCAGTCACCGGACCGCTAGCACACAATCATATTGCGTTGAT
TCTTTCGCGCTTTGAGTCCCCGCTTCATCCGCGGTGGCTGCAGTTTCTTG
CATCGGCTCGGCCTGCTCTTGAGGCTTGTCACTGATGTTCTGATAAGCAT
ACAATCGTTCCAGCTACGTTGTTAAACCCGTTCTTAGCGGCCTACATTGA
CAGTAGGCGGAATGAAGCGCGAGTAATCTGTGAGTCTTTTGTAGATTCCA
CTTCTTAGTGCTGTGGTATTTGCAAGACAAACCATTTAAGCATATGGCTT
ACAAAACATGTATGAGATTATGCGTGATACACCAAACGATTATAACTGCT
ACTCTTCACCTCGACTTTACACCTGAGAGCGATGATCTCTATCAAGAGAC
CTTTCTGCTACCCACCAACCTTTAGGGAACCACATGCCAGCTCTAACTTC
TGACTAAAACAATGGAAGCTAAATCTATACCTAAGGA
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Coding sequence (CDS) from alignment at ch6:136880..139366+

>KJC3_007790-T1 ID=KJC3_007790-T1|Name=KJC3_007790-T1|organism=Aspergillus niger KJC3|type=CDS|length=2004bp|location=Sequence derived from alignment at ch6:136880..139366+ (Aspergillus niger KJC3)
ATGGCCTATCGAATTGGCCTAGACCGACTCGAGCACATCCGCGTGCTCTA
CGCCGACTGGAGCACGGTCAGCGACGAAGATATCCAGGAGTGGCGGGCTC
TCTGGTGGCGCATCTACCGCCTCGACACCTACGCCAATCTTGCCTCTGGC
ACACCGTATCTCATCGACGACACCTTAATCGACACCTCTTTCAATCTCAG
CCAAACAGCAAACCCTTCTCATGCAATCTTCCTTCCTCCTAACTCAGCTG
GTCTCGCCGAGCTCCTCCCCGCCATTACCTCAGACCCTGAAACCCTCCTA
GACAATATCCACAACATCACCATCGCATCCATGCGCCAAGCCGGTCTTAT
GATCCGCATCCACATGCTCCGCTGGCAAGCCGGGATGCTATCACAGATCA
CTGCCGTCGATCGCCAACTAACAACCCTGCGCCTCGCCCTACCACCCGGC
TGGCTCAACCCGCACCGCAACGCCTTCATCAACGAGAGCCCGCTCGCCCA
CCACGCGCGGCTCATAACAGTCTACCACCTTCGCATGGCGCAGCTGCTCC
TCTCCGTTGCAGAGTGCAGCGCCCGGCGCGCAGACGACTGGCTCTCAGCC
TGGCAGCGCGTCCTGGAGACATGTCAGGATATCGCTGGGTTGGCGAGTCA
GTGGGACAGCGCATATTGCATGACGGTCGACCCGGCCATCACGTTTACCA
TCTTCACAACACTCATATTTCTTGATCTTCAAAGGAAGTGCGAGCTAGTG
GCAACCGATGATCTCCGTTCGAGCATTGACCATGACATCACCGTGCTGCA
TCTGCAGCTTAAACACTTCGGGACCATATGGACGCAGGCGAGGCTGCTTA
CTTTGTCATTCGAAAGCTTCAGTGAATCAGTCACCGGACCGCTAGCACAC
AATCATATTGCGTTGATTCTTTCGCGCTTTGAGTCCCCGCTTCATCCGCG
GTGGCTGCAGTTTCTTGCATCGGCTCGGCCTGCTCTTGAGGCTTGTCACT
GAATGGCCTATCGAATTGGCCTAGACCGACTCGAGCACATCCGCGTGCTC
TACGCCGACTGGAGCACGGTCAGCGACGAAGATATCCAGGAGTGGCGGGC
TCTCTGGTGGCGCATCTACCGCCTCGACACCTACGCCAATCTTGCCTCTG
GCACACCGTATCTCATCGACGACACCTTAATCGACACCTCTTTCAATCTC
AGCCAAACAGCAAACCCTTCTCATGCAATCTTCCTTCCTCCTAACTCAGC
TGGTCTCGCCGAGCTCCTCCCCGCCATTACCTCAGACCCTGAAACCCTCC
TAGACAATATCCACAACATCACCATCGCATCCATGCGCCAAGCCGGTCTT
ATGATCCGCATCCACATGCTCCGCTGGCAAGCCGGGATGCTATCACAGAT
CACTGCCGTCGATCGCCAACTAACAACCCTGCGCCTCGCCCTACCACCCG
GCTGGCTCAACCCGCACCGCAACGCCTTCATCAACGAGAGCCCGCTCGCC
CACCACGCGCGGCTCATAACAGTCTACCACCTTCGCATGGCGCAGCTGCT
CCTCTCCGTTGCAGAGTGCAGCGCCCGGCGCGCAGACGACTGGCTCTCAG
CCTGGCAGCGCGTCCTGGAGACATGTCAGGATATCGCTGGGTTGGCGAGT
CAGTGGGACAGCGCATATTGCATGACGGTCGACCCGGCCATCACGTTTAC
CATCTTCACAACACTCATATTTCTTGATCTTCAAAGGAAGTGCGAGCTAG
TGGCAACCGATGATCTCCGTTCGAGCATTGACCATGACATCACCGTGCTG
CATCTGCAGCTTAAACACTTCGGGACCATATGGACGCAGGCGAGGCTGCT
TACTTTGTCATTCGAAAGCTTCAGTGAATCAGTCACCGGACCGCTAGCAC
ACAATCATATTGCGTTGATTCTTTCGCGCTTTGAGTCCCCGCTTCATCCG
CGGTGGCTGCAGTTTCTTGCATCGGCTCGGCCTGCTCTTGAGGCTTGTCA
CTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007790KJC3_007790Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007790-T1KJC3_007790-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007790-T1.utr5p1KJC3_007790-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_007790-T1.utr5p2KJC3_007790-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007790-T1.utr5p3KJC3_007790-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007790-T1.exon1KJC3_007790-T1.exon1Aspergillus niger KJC3exon
KJC3_007790-T1.exon2KJC3_007790-T1.exon2Aspergillus niger KJC3exon
KJC3_007790-T1.exon3KJC3_007790-T1.exon3Aspergillus niger KJC3exon
KJC3_007790-T1.exon4KJC3_007790-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007790-T1.cdsKJC3_007790-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007790-T1.utr3p1KJC3_007790-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:136880..139366 +
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