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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:141862..144267+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007792-T1 ID=KJC3_007792-T1|Name=KJC3_007792-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2406bp|location=Sequence derived from alignment at ch6:141862..144267+ (Aspergillus niger KJC3)
TCAATCACAAGCCATAGAAGAGCGACCCATTAAAACCTATCAATAGAATA
ACCCAGGCCGATAGAAACCAGATGGTTGCGCTTCGATCGTTGTTCATGGA
CGCTATCAACAACAGGAAGATGCGCTAGCCACACGGCGATTCATGAAGAC
GGTCCTGGAAGCGGGAACTCTTTTCCTAACGTCTCCTAGCATGATTCCTT
GTCAGGTAATTGAATGAGTTTAGATGCTGAGCATGAGCGGGCAGTATCAA
TTATGGCAAAGTTAGAACATTATAGCGCACCAAACGGACTACATCGCGTT
CCTGGGCATAGAATGTGTGGTAGGGCTGGCAATCTCTATCCTGCTCTGTG
CCTAAGTGCTTCCATCAGGGGAGATGAGAGCATAACCAAGGGTTCCGCTG
TCATTGAGGCGTGTTGATACGTTATCTACCATGGCGTGCTGGCGTGCTAG
TAAGCACTTAGCCCAAAGCGGATGTGCCGAAGATACCCAGAGAGATAAAC
AACCCAAGGGAGCTGCTGCCTGTGAGCGGAAACCCATTTATCAAGCACCT
AGGCTCAGGAAATGTGGTGGTCTTGGTTTGACTGATCGCATTGTTGTCTC
AAAGCCACCAGAACGCTTCACAGAAAGATGGATGAATGGAACGTCCTAAG
CGCAACGGCAACTCAACTTGGCCAGCTGCTGCGAGGAGGCCACACAAATA
GTGTGGATATCGTCAAGGCCTACCTCGCTCAAATCGACCGGCACAACAAA
GCTGGCCTGAAGCTACATGCAATCATCTCCGTCAATGCTGAGACTGCTCT
TGCTCAAGCAGCGACCCGCGACAACGAAAGATCAGAGGGCAAAGTCCGCA
GCCCACTTCATGGAATCCCGATCATCGTAAAAGATGCGATCATCACGTCC
GAGTCCCTAGGTTTACCAACCACGGTCGGCGCTTTCGCTTTCAAAGATAC
CTATGGACTGAAGAACGCATCTATCATAGATATCCTCCTGGAGCATGGCA
TGATCATCCTTGCAAAAGCCAGTTTGACGGAATTTTGCGGTCTGAAGGCG
ACTTGTATAACCGCCGGCTGGTCGGCAATCAACGGACAAACTCAGTCCGC
TTATATCGAGGGTGGTTTCCGATCGGACGATCTCTTCATCGGTCGCTCTG
GGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTGGGGTTTCAGCCGGCTTT
GCGCCGTTATCGCTGGGGACGGAAACTTCGGGCTCAGTCTGCATGCCGGC
AAATCGGGCAGGGCTGTACTCCATCACTGCGAGTCGAGGGAGTGTCCCCA
TAGAAGGAATCTTTCGCTTGAGCAAAGACTTTGATAAGTTGGGTGCTATG
GCCAAATGTCCCGAGGACCTCGGCCTGTTGATGCCGCTGCTCAATGGTTC
GCATTTGGAGCCTGTGACGTGGAGCGACATTTCGGTCGGTTTTGTCGATC
CGATTGTATGGGATGCATTTGGATTCCAAAAGAGCCAAGACAAAAATATA
GAAAGTCAGATTGTAAGTTATCTTATCATTGATTTCCAGGCGGGCTACAC
CTGACGCTTTATAGCTCGAGCGATACGAATGGGCAAAGGCAGAAATTACT
CGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTTACCGACGATGGAGAG
CCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCGTTGCATGTGCGCTCA
TCACTTCTTACGACATGTGATCGATAATAGCTGATGAAAGTATAGTTCAT
GAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTGGTAGATCCCGA
AGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACAGCATGCCTCTT
CTGCCATGCCCCAGCGTAAGTAATTATCATGGCATCTAAAGAAGTCCAAA
TACTTATACCTCGTAGCACATACCGATCAAACTGATCTTAAGGAGACGCT
CAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAGGCCTACGCTC
AGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACAAAGTAGTCGC
ATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCGCAGTGGCTGC
TTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGCTTGGAAGGTC
CTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGCCAGCGCGGGG
GGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAACAGATTGTGGG
TGATTGGAAGATTCCCCCTCTGCTGTTCTGATGAAATTTATTGTGACCAT
TCCCGTCTTGATTGCCCGACTTTAATATGTGCTATGCGGGACTTTTGTAT
CTATTTAACATGTTGAGGGTCATAATAAGCCTATATGAAAAGCGACTTCA
TCGAAG back to topCoding sequence (CDS) from alignment at ch6:141862..144267+ >KJC3_007792-T1 ID=KJC3_007792-T1|Name=KJC3_007792-T1|organism=Aspergillus niger KJC3|type=CDS|length=5988bp|location=Sequence derived from alignment at ch6:141862..144267+ (Aspergillus niger KJC3)
ATGGATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCT
GCTGCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCG
CTCAAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATC
TCCGTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGA
AAGATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCG
TAAAAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTC
GGCGCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCAT
AGATATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGA
CGGAATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCA
ATCAACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGA
CGATCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCG
CAGTTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACT
TCGGGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCAC
TGCGAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAG
ACTTTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTG
TTGATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGA
CATTTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCC
AAAAGAGCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAA
TGGGCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGT
AGGTTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACT
ACTCCGTTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCT
CTCCTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAA
TGAACAGCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTG
ATCTTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCA
GCCAAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGC
GCTACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAA
TCTGCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTC
GATCGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCT
GATTGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGT
GGAAACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATG
GATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCT
GCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTC
AAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCC
GTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAG
ATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAA
AAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGC
GCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGA
TATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGG
AATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATC
AACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGA
TCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAG
TTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCG
GGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGC
GAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACT
TTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTG
ATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACAT
TTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAA
AGAGCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGG
GCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGG
TTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACT
CCGTTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTC
CTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGA
ACAGCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATC
TTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCC
AAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCT
ACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCT
GCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGAT
CGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGAT
TGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGA
AACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATGGAT
GAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCTGCG
AGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTCAAA
TCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCCGTC
AATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAGATC
AGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAAAAG
ATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGCGCT
TTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGATAT
CCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGGAAT
TTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATCAAC
GGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGATCT
CTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTG
GGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCGGGC
TCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGCGAG
TCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACTTTG
ATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTGATG
CCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACATTTC
GGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAAAGA
GCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGGGCA
AAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTT
ACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCG
TTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTG
GTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACA
GCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATCTTA
AGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAG
GCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACA
AAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCG
CAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGC
TTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGC
CAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAAC
AGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATGGATGAA
TGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCTGCGAGG
AGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTCAAATCG
ACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCCGTCAAT
GCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAGATCAGA
GGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAAAAGATG
CGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGCGCTTTC
GCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGATATCCT
CCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGGAATTTT
GCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATCAACGGA
CAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGATCTCTT
CATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTGGGG
TTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCGGGCTCA
GTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGCGAGTCG
AGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACTTTGATA
AGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTGATGCCG
CTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACATTTCGGT
CGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAAAGAGCC
AAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGGGCAAAG
GCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTTACC
GACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCGTTG
CATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTGGTA
GATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACAGCA
TGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATCTTAAGG
AGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAGGCC
TACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACAAAG
TAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCGCAG
TGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGCTTG
GAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGCCAG
CGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAACAGA
TTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007792-T1.utr5p1 | KJC3_007792-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007792-T1.utr3p1 | KJC3_007792-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036928 |
| DBxref | InterPro:IPR023631 |
| DBxref | PFAM:PF01425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:141862..144267 + |
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