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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:153373..155220+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007798-T1 ID=KJC3_007798-T1|Name=KJC3_007798-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1848bp|location=Sequence derived from alignment at ch6:153373..155220+ (Aspergillus niger KJC3)
CCGAGGATGTTCGGAGCACGAAGGAAGCCTGGCAAACCTTGCTTTCGCTG
CCAAGGCTCTCCTTTGTGGGAGTAGAAATTTTCAATGGCTGCAGAACTCC
TGTTTCTGCCTGGGCTATAGGAGGCTTCGCTTCTTCCCGATCGGCGTGAT
AAGAGGGGAGAATTGTCCTGGATATTGCAACTACGCCTGCCTGCATTGCA
GGGCGGACTCCGCCTGTTCAAGACATGTGGACGGCCATTGAACAGAGGGA
TGAGGCATCAAAAGCAGCCTATAACAGCAATGTCCAACTATGGACCCTCT
ATGCGATCGGCTGTGCGGTGACGCTACTTAGAACTTATTCACAATGCAAG
GATCTGGGTTGGAGAAGGTTGCGCCTTGACGATTATCTGATATGGGTCGC
AATAGTAGGTACATTCCCAACCTAACCGTTTCTTATGTGGACATATGCTG
ATACACTCGCTCTCTGTAGTTATTTTACACCGCACAAGTGGCACTGGCGT
ATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAGCATGACAGAG
GCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATCGAGAAAGGTC
AGTCATTCAACCCCGATCCGGTGACTGGACATTGACGGACGCGGTCAATA
GAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATATACAGCG
TTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCGACTGAT
GGTATGTTTGTTGGGGATGGTCATTCTGCTTTAGCAGGAGAGGGCTGACC
GTACTATAGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGG
GTTCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTG
CGGCATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGT
AGTAAGTTTGCGCTTCGCGACCCTAAACCATAATAGTCGCTCATGGTTTT
CTACTAGATTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAAC
CTTCGCCGCAAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCC
CGATGCTTTGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACG
ATAGTACTTGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAG
TGTTTTTCTGTTGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATA
CATGCAGAGCCATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGT
CGATAGCAGACGAATGGGGCACACGAGAGACATTCGTCGCCGTGATCACC
ACAAATCTCCCTATGGTGTTCCACCTGCTACGGACCTGGCTGGCCCGGGG
ATTTGGCAGCGCCTTCCAATCGTCGCAGCGAACCTACCAGCTTCCATCAG
GAGGACTTCAGAACACCGGTGGCGGTACTACTCGGAGAAGAGGCCGAGGA
GGTACCAGCAGCCGGGATCCGATCACCGTCGGCTTGACGTTTACCGAGAG
TGAAGAACGAATGATGCAGGACATTAAGCTGCAGACACTGGAGCCACATG
AAGCCCCCACAGCTGGTGCCATCATGGTCTCGAATCAGATCGAAGTCACC
CATCAGACGCGAAACAGTCATGCCGAGGAGCCGTCTGCACCGAGAGAAAA
TGCAAATTGGTAGCATTCGGTCCGCAGCCGAGGATTTTCATACCTAGTTT
GTTCTTATAATAATAAGATTTGGAAATGCGTAATTTTCAGTACAAGCGGG
GTGCTCTTGATTAAGCAGGACAGGCTGACTAGTAAGGACATTTGGCCC back to topCoding sequence (CDS) from alignment at ch6:153373..155220+ >KJC3_007798-T1 ID=KJC3_007798-T1|Name=KJC3_007798-T1|organism=Aspergillus niger KJC3|type=CDS|length=7146bp|location=Sequence derived from alignment at ch6:153373..155220+ (Aspergillus niger KJC3)
ATGTGGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAA
CAGCAATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGC
TACTTAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGC
CTTGACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGT
GGCACTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACA
GCATGACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATAT
CGAGAAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATA
TACAGCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTC
GACTGATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGG
TTCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGC
GGCATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTA
ATTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCC
GCAAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCT
TTGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTAC
TTGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTT
CTGTTGGTGGAACCCAACAATGGAGCGTCGATAGCAGACGAATGGGGCAC
ACGAGAGACATTCGTCGCCGTGATCACCACAAATCTCCCTATGGTGTTCC
ACCTGCTACGGACCTGGCTGGCCCGGGGATTTGGCAGCGCCTTCCAATCG
TCGCAGCGAACCTACCAGCTTCCATCAGGAGGACTTCAGAACACCGGTGG
CGGTACTACTCGGAGAAGAGGCCGAGGAGGTACCAGCAGCCGGGATCCGA
TCACCGTCGGCTTGACGTTTACCGAGAGTGAAGAACGAATGATGCAGGAC
ATTAAGCTGCAGACACTGGAGCCACATGAAGCCCCCACAGCTGGTGCCAT
CATGGTCTCGAATCAGATCGAAGTCACCCATCAGACGCGAAACAGTCATG
CCGAGGAGCCGTCTGCACCGAGAGAAAATGCAAATTGGTAGATGTGGACG
GCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAACAGCAATGT
CCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGCTACTTAGAA
CTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGCCTTGACGAT
TATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGTGGCACTGGC
GTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAGCATGACAG
AGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATCGAGAAAGA
ATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATATACAGCGTT
GATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCGACTGATGG
ATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGGTTCGCCCTC
GTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGCGGCATGCCG
GCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTAATTCCTGTC
AACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCCGCAAATCTC
GCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCTTTGGAAATC
CAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTACTTGGTGCGG
GGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTTCTGTTGGTG
GAACCCAACAATGGAGCGTCGATAGCAGACGAATGGGGCACACGAGAGAC
ATTCGTCGCCGTGATCACCACAAATCTCCCTATGGTGTTCCACCTGCTAC
GGACCTGGCTGGCCCGGGGATTTGGCAGCGCCTTCCAATCGTCGCAGCGA
ACCTACCAGCTTCCATCAGGAGGACTTCAGAACACCGGTGGCGGTACTAC
TCGGAGAAGAGGCCGAGGAGGTACCAGCAGCCGGGATCCGATCACCGTCG
GCTTGACGTTTACCGAGAGTGAAGAACGAATGATGCAGGACATTAAGCTG
CAGACACTGGAGCCACATGAAGCCCCCACAGCTGGTGCCATCATGGTCTC
GAATCAGATCGAAGTCACCCATCAGACGCGAAACAGTCATGCCGAGGAGC
CGTCTGCACCGAGAGAAAATGCAAATTGGTAGATGTGGACGGCCATTGAA
CAGAGGGATGAGGCATCAAAAGCAGCCTATAACAGCAATGTCCAACTATG
GACCCTCTATGCGATCGGCTGTGCGGTGACGCTACTTAGAACTTATTCAC
AATGCAAGGATCTGGGTTGGAGAAGGTTGCGCCTTGACGATTATCTGATA
TGGGTCGCAATATTATTTTACACCGCACAAGTGGCACTGGCGTATAGTGT
CGGCAATGTAGCCCATGGACTCGCAAACAACAGCATGACAGAGGCCCAGA
GAGCTACGTTGGATCCAGGTAGCGCAGAATATCGAGAAAGAATAATTGGC
TCCAAGATACAAATTGCCGGCTGGGCCACATATACAGCGTTGATCAACTC
GCTCAAGTTGTCAATGCTGGTCTTCTACACTCGACTGATGGATGGTCTCG
GCCGTCGTTATCGCGTGCCCATCTGGATTGGGTTCGCCCTCGTCATCGGA
AGTTTTGTCGCCTGTATGATCACTATCCTTGCGGCATGCCGGCCCTTCAA
TAAGAATTGGCAAATCTACCCTGACCCCGGTAATTCCTGTCAACCTGCCA
TTTCGAAGCCAGTGATCGCCGCAACCTTCGCCGCAAATCTCGCCACAGAC
CCATATTTGGTTTTGATACCGATCCCGATGCTTTGGAAATCCAGCCTCAA
GCTTGTGAAAAAGATTGCGGTGACGATAGTACTTGGTGCGGGGATCTTTA
TTCTGGTGTGCGCGACAATCAAGAGTGTTTTTCTGTTGGTGGAACCCAAC
AATGGAGCGTCGATAGCAGACGAATGGGGCACACGAGAGACATTCGTCGC
CGTGATCACCACAAATCTCCCTATGGTGTTCCACCTGCTACGGACCTGGC
TGGCCCGGGGATTTGGCAGCGCCTTCCAATCGTCGCAGCGAACCTACCAG
CTTCCATCAGGAGGACTTCAGAACACCGGTGGCGGTACTACTCGGAGAAG
AGGCCGAGGAGGTACCAGCAGCCGGGATCCGATCACCGTCGGCTTGACGT
TTACCGAGAGTGAAGAACGAATGATGCAGGACATTAAGCTGCAGACACTG
GAGCCACATGAAGCCCCCACAGCTGGTGCCATCATGGTCTCGAATCAGAT
CGAAGTCACCCATCAGACGCGAAACAGTCATGCCGAGGAGCCGTCTGCAC
CGAGAGAAAATGCAAATTGGTAGATGTGGACGGCCATTGAACAGAGGGAT
GAGGCATCAAAAGCAGCCTATAACAGCAATGTCCAACTATGGACCCTCTA
TGCGATCGGCTGTGCGGTGACGCTACTTAGAACTTATTCACAATGCAAGG
ATCTGGGTTGGAGAAGGTTGCGCCTTGACGATTATCTGATATGGGTCGCA
ATATTATTTTACACCGCACAAGTGGCACTGGCGTATAGTGTCGGCAATGT
AGCCCATGGACTCGCAAACAACAGCATGACAGAGGCCCAGAGAGCTACGT
TGGATCCAGGTAGCGCAGAATATCGAGAAAGAATAATTGGCTCCAAGATA
CAAATTGCCGGCTGGGCCACATATACAGCGTTGATCAACTCGCTCAAGTT
GTCAATGCTGGTCTTCTACACTCGACTGATGGATGGTCTCGGCCGTCGTT
ATCGCGTGCCCATCTGGATTGGGTTCGCCCTCGTCATCGGAAGTTTTGTC
GCCTGTATGATCACTATCCTTGCGGCATGCCGGCCCTTCAATAAGAATTG
GCAAATCTACCCTGACCCCGGTAATTCCTGTCAACCTGCCATTTCGAAGC
CAGTGATCGCCGCAACCTTCGCCGCAAATCTCGCCACAGACCCATATTTG
GTTTTGATACCGATCCCGATGCTTTGGAAATCCAGCCTCAAGCTTGTGAA
AAAGATTGCGGTGACGATAGTACTTGGTGCGGGGATCTTTATTCTGGTGT
GCGCGACAATCAAGAGTGTTTTTCTGTTGGTGGAACCCAACAATGGAGCG
TCGATAGCAGACGAATGGGGCACACGAGAGACATTCGTCGCCGTGATCAC
CACAAATCTCCCTATGGTGTTCCACCTGCTACGGACCTGGCTGGCCCGGG
GATTTGGCAGCGCCTTCCAATCGTCGCAGCGAACCTACCAGCTTCCATCA
GGAGGACTTCAGAACACCGGTGGCGGTACTACTCGGAGAAGAGGCCGAGG
AGGTACCAGCAGCCGGGATCCGATCACCGTCGGCTTGACGTTTACCGAGA
GTGAAGAACGAATGATGCAGGACATTAAGCTGCAGACACTGGAGCCACAT
GAAGCCCCCACAGCTGGTGCCATCATGGTCTCGAATCAGATCGAAGTCAC
CCATCAGACGCGAAACAGTCATGCCGAGGAGCCGTCTGCACCGAGAGAAA
ATGCAAATTGGTAGATGTGGACGGCCATTGAACAGAGGGATGAGGCATCA
AAAGCAGCCTATAACAGCAATGTCCAACTATGGACCCTCTATGCGATCGG
CTGTGCGGTGACGCTACTTAGAACTTATTCACAATGCAAGGATCTGGGTT
GGAGAAGGTTGCGCCTTGACGATTATCTGATATGGGTCGCAATATTATTT
TACACCGCACAAGTGGCACTGGCGTATAGTGTCGGCAATGTAGCCCATGG
ACTCGCAAACAACAGCATGACAGAGGCCCAGAGAGCTACGTTGGATCCAG
GTAGCGCAGAATATCGAGAAAGAATAATTGGCTCCAAGATACAAATTGCC
GGCTGGGCCACATATACAGCGTTGATCAACTCGCTCAAGTTGTCAATGCT
GGTCTTCTACACTCGACTGATGGATGGTCTCGGCCGTCGTTATCGCGTGC
CCATCTGGATTGGGTTCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATG
ATCACTATCCTTGCGGCATGCCGGCCCTTCAATAAGAATTGGCAAATCTA
CCCTGACCCCGGTAATTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCG
CCGCAACCTTCGCCGCAAATCTCGCCACAGACCCATATTTGGTTTTGATA
CCGATCCCGATGCTTTGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGC
GGTGACGATAGTACTTGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAA
TCAAGAGTGTTTTTCTGTTGGTGGAACCCAACAATGGAGCGTCGATAGCA
GACGAATGGGGCACACGAGAGACATTCGTCGCCGTGATCACCACAAATCT
CCCTATGGTGTTCCACCTGCTACGGACCTGGCTGGCCCGGGGATTTGGCA
GCGCCTTCCAATCGTCGCAGCGAACCTACCAGCTTCCATCAGGAGGACTT
CAGAACACCGGTGGCGGTACTACTCGGAGAAGAGGCCGAGGAGGTACCAG
CAGCCGGGATCCGATCACCGTCGGCTTGACGTTTACCGAGAGTGAAGAAC
GAATGATGCAGGACATTAAGCTGCAGACACTGGAGCCACATGAAGCCCCC
ACAGCTGGTGCCATCATGGTCTCGAATCAGATCGAAGTCACCCATCAGAC
GCGAAACAGTCATGCCGAGGAGCCGTCTGCACCGAGAGAAAATGCAAATT
GGTAGATGTGGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCC
TATAACAGCAATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGT
GACGCTACTTAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGT
TGCGCCTTGACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCA
CAAGTGGCACTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAA
CAACAGCATGACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAG
AATATCGAGAAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCC
ACATATACAGCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTA
CACTCGACTGATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGA
TTGGGTTCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATC
CTTGCGGCATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCC
CGGTAATTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCT
TCGCCGCAAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCG
ATGCTTTGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGAT
AGTACTTGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTG
TTTTTCTGTTGGTGGAACCCAACAATGGAGCGTCGATAGCAGACGAATGG
GGCACACGAGAGACATTCGTCGCCGTGATCACCACAAATCTCCCTATGGT
GTTCCACCTGCTACGGACCTGGCTGGCCCGGGGATTTGGCAGCGCCTTCC
AATCGTCGCAGCGAACCTACCAGCTTCCATCAGGAGGACTTCAGAACACC
GGTGGCGGTACTACTCGGAGAAGAGGCCGAGGAGGTACCAGCAGCCGGGA
TCCGATCACCGTCGGCTTGACGTTTACCGAGAGTGAAGAACGAATGATGC
AGGACATTAAGCTGCAGACACTGGAGCCACATGAAGCCCCCACAGCTGGT
GCCATCATGGTCTCGAATCAGATCGAAGTCACCCATCAGACGCGAAACAG
TCATGCCGAGGAGCCGTCTGCACCGAGAGAAAATGCAAATTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007798-T1.utr5p1 | KJC3_007798-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007798-T1.utr3p1 | KJC3_007798-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:153373..155220 + |
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