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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:230947..233228+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007831-T1 ID=KJC3_007831-T1|Name=KJC3_007831-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2282bp|location=Sequence derived from alignment at ch6:230947..233228+ (Aspergillus niger KJC3)
AGTTACTCTTGCTTCCTTTCCATGATGTCTATTGGGTAGGAGAATGCGAT
AATGGTTAGCCCGCAGACCCTTATTATCCGAAACTCTGAAGAGAAACTTT
GCTTAGAATAGCTGCAGCTGCCAGCATGGAATGTGGCGAAGAGTTCATCG
ATCCATCTCTGCTGTGCCACTCGACGCTCGACGGGCATGATTTGGACTCC
AGGCATTTTAATCTTTCCAATCCGCAGCCTTATGATCTGAATCTCCAGCA
AGTACCAGCGGTCCTGCCCAACGCCCAGCAACGGGCTGTGCCAAGCGAGC
TATTTGAGGATGCGACCACCAACAACACTACTGCCCCGCGGGGCCAACTT
CCACGGCGTAGAAGTCGGTACTTAACGAGGCATTCGGGGACACAAGCATA
CTCTGTGATGATACCAAAAGCAAGCAGCTTCAGTCCTATGGAGCGCTGGC
GGAATTCGCCCCCTGAGGAAGAAGGTTGCCTAATCCCCGATATCATCGAT
GCTCTCAGAGACAACCCAAGCCAAGGGGTCCAAACCAACTTGCAAAACCC
CGGCGACGACTACAGTGCGTTCCATGGGTATCGGAGAGCTGCTTCAATTA
CTAGCGGGGAGTCTAGTGCATCCTCGCGAAGCACCCAGAAATCCGGGCGT
TCAAGCTCATCGGCCCAGAATCCATTGGCGGTACAGGGGCGTCACGGCAA
CATCAGGGCGGGCAAGACTACGAGACGAAAGACGAAGATTACTTCGACCA
CTGCTCAGCGTCGATACTGCTGCACATTCTGCTGCGACCGGTTCAAAAGC
AAGTATGACTGGGCACGACATGAGAAATCGCTCCACGTCACCTTGGAAGC
ATGGCACTGCGCGCCTTATGGCACTACCATTATGTCCTCTAATGAACCTT
CTATGACTAGATGTGCCTTCTGTGGGCTTACTAACCCCGACTCCGACCAT
CTGGAGGAACACGCCGCCACAGCTTGCGAGGACGAGTCCAGCAGTCGACG
TTCCTTCCGCCGTAAAGATCACTTAGTGCAGCATCTACGGCTCGTACACA
ATGTCGACTCCCCGCCACAACTCGACAGTTGGAGGATCGGACAGTCCGCC
ATCACCTCGCGGTGCGGCTTCTGCAGTCAAGCGCTGATGACCTGGAAAGA
GCGTGTGGACCATCTAGCCGAACACTTTCGGACAGGCTCGACAATGGCAG
AGTGGCGCGGCGACCATGACTTCCCGCCTGATTTCGCCGCCCTAGTAGCC
AATGCATTGCCCCCTTACCTCATCGGCTCAGAATCTCAGAGCATGATTCC
ATTTTCAGCGACAAATTGCGATGTGGAAGATCATTTGGCGCAGATTTACT
CCCGAGCTAATTGGGACGCGAAAGACCAGAAAGAGGCCAGCACTATTACA
GCCCCTTCGGCTCCAAGTGTAGCCTTGCCCTTGCGGGCTCTTGCACCGGG
TGTTGCCCCCGAGCGGCTCAGCTCGTTCACCCAAGTGCTAACGCTGCATC
TCAGCCGGTTTGCACAGGAACAGATGAAAAAGGGCGTGATTCCGAGTGAC
GAGATGTTCCAGCAGGAATCCAGACGAGTACTGTATGACTCAGATGATTC
ATGGAACCAGACGATTGCAGATAATCCGGAGTGGCTGGCTACTTTTAAGG
ATCTGCATTTCGATAAAGAGAAGGGTGTTCATGATTCTGGCGAAAACTTT
GCCTCATGAACCGAATGAATACAACGTGTACTTAGGGTCCCATGTCTCCC
TTTCTTTCCTTCACTCTCGGGTGATGTACTTATACCCCCAGCGTAGTATA
CCCTGAGCAGTCTGTGCTTCCTAATCTCAGGGCTGCTGATGCTGCTGCCA
ACCGGAGATGCAACAGCCGATCTGTATCTCCGGGAGCGATCGTCACTGTG
GTCAAAATATGGGATGTAGGTACCGGATGAGCGGGTTAGAGAGCGTTTCG
GCTATCCTTTGAACGAAGAGATGGACCTATGGTGAGATAGTATGGCGCTA
TGAGAGTTGGTGAGACCGGAAATTTGTGTAAGCCGAAGGATTGTCTTCAG
GATGTCTCGAATGTGTGGTGAAGGGGAGAGCCAAAGGCTAGCGGGGACAC
GTTCGGCGGGTTTGGGGGTGGGAGCGTTGGAACAAAATCGTGTAAACTGT
AAACTTTGCTGGTTAGCCATGTTCTCATACATTGTATGTAAAGTAATCAT
TCAATGTTCGGATAATAGCTAGGTGTGGGTGTGATGAAGGTGAGGATTAG
ACTGGAAAAGCTGGAAGAAACTTCATCTTGCC back to topCoding sequence (CDS) from alignment at ch6:230947..233228+ >KJC3_007831-T1 ID=KJC3_007831-T1|Name=KJC3_007831-T1|organism=Aspergillus niger KJC3|type=CDS|length=1584bp|location=Sequence derived from alignment at ch6:230947..233228+ (Aspergillus niger KJC3)
ATGGAATGTGGCGAAGAGTTCATCGATCCATCTCTGCTGTGCCACTCGAC
GCTCGACGGGCATGATTTGGACTCCAGGCATTTTAATCTTTCCAATCCGC
AGCCTTATGATCTGAATCTCCAGCAAGTACCAGCGGTCCTGCCCAACGCC
CAGCAACGGGCTGTGCCAAGCGAGCTATTTGAGGATGCGACCACCAACAA
CACTACTGCCCCGCGGGGCCAACTTCCACGGCGTAGAAGTCGGTACTTAA
CGAGGCATTCGGGGACACAAGCATACTCTGTGATGATACCAAAAGCAAGC
AGCTTCAGTCCTATGGAGCGCTGGCGGAATTCGCCCCCTGAGGAAGAAGG
TTGCCTAATCCCCGATATCATCGATGCTCTCAGAGACAACCCAAGCCAAG
GGGTCCAAACCAACTTGCAAAACCCCGGCGACGACTACAGTGCGTTCCAT
GGGTATCGGAGAGCTGCTTCAATTACTAGCGGGGAGTCTAGTGCATCCTC
GCGAAGCACCCAGAAATCCGGGCGTTCAAGCTCATCGGCCCAGAATCCAT
TGGCGGTACAGGGGCGTCACGGCAACATCAGGGCGGGCAAGACTACGAGA
CGAAAGACGAAGATTACTTCGACCACTGCTCAGCGTCGATACTGCTGCAC
ATTCTGCTGCGACCGGTTCAAAAGCAAGTATGACTGGGCACGACATGAGA
AATCGCTCCACGTCACCTTGGAAGCATGGCACTGCGCGCCTTATGGCACT
ACCATTATGTCCTCTAATGAACCTTCTATGACTAGATGTGCCTTCTGTGG
GCTTACTAACCCCGACTCCGACCATCTGGAGGAACACGCCGCCACAGCTT
GCGAGGACGAGTCCAGCAGTCGACGTTCCTTCCGCCGTAAAGATCACTTA
GTGCAGCATCTACGGCTCGTACACAATGTCGACTCCCCGCCACAACTCGA
CAGTTGGAGGATCGGACAGTCCGCCATCACCTCGCGGTGCGGCTTCTGCA
GTCAAGCGCTGATGACCTGGAAAGAGCGTGTGGACCATCTAGCCGAACAC
TTTCGGACAGGCTCGACAATGGCAGAGTGGCGCGGCGACCATGACTTCCC
GCCTGATTTCGCCGCCCTAGTAGCCAATGCATTGCCCCCTTACCTCATCG
GCTCAGAATCTCAGAGCATGATTCCATTTTCAGCGACAAATTGCGATGTG
GAAGATCATTTGGCGCAGATTTACTCCCGAGCTAATTGGGACGCGAAAGA
CCAGAAAGAGGCCAGCACTATTACAGCCCCTTCGGCTCCAAGTGTAGCCT
TGCCCTTGCGGGCTCTTGCACCGGGTGTTGCCCCCGAGCGGCTCAGCTCG
TTCACCCAAGTGCTAACGCTGCATCTCAGCCGGTTTGCACAGGAACAGAT
GAAAAAGGGCGTGATTCCGAGTGACGAGATGTTCCAGCAGGAATCCAGAC
GAGTACTGTATGACTCAGATGATTCATGGAACCAGACGATTGCAGATAAT
CCGGAGTGGCTGGCTACTTTTAAGGATCTGCATTTCGATAAAGAGAAGGG
TGTTCATGATTCTGGCGAAAACTTTGCCTCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007831-T1.utr5p1 | KJC3_007831-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007831-T1.utr3p1 | KJC3_007831-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.4 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:230947..233228 + |
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