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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:252577..254593+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007841-T2 ID=KJC3_007841-T2|Name=KJC3_007841-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2017bp|location=Sequence derived from alignment at ch6:252577..254593+ (Aspergillus niger KJC3)
CATCATTACGATCGCTGGACGAACCGGGAGTCTGGACCACACACATACTG
GGAAGGGAACTCGGGCCAAGCACGCCCCCGTAGGAAAAAAGCTTGCTCCT
GACGAATATCGACTGGTGTTTCGAAATCCACATGGCCTATGTGCCGAGGA
AGATTGATTATAAAGGGTGACCAGGAGAAATCCCTTTTCCGTCGAGTGGC
TTCCCCGTTTGCCTGTTGCCTCTCTGTCCTGGGATGTTGCTCCTCTGAGT
TACATCCCACATCACAATGAAGATACATCAGTGTTTAATCACCATATTGG
CGGCGTTGACGGTATCTGTGTTCGCCGCGTCGTCAAATGGCACAGAATTC
CCAGAGTGTGCGGTAAGTGGGATTCCCACCCGGGGGTTCCGCTTTCATCA
TTGACCATGTCCCCAGGTGTCTTGTTTGCACCAAGAATCTCCAAATTGCA
CCATCACCGACGCATCATGTGTATGTACCGGCGATGCGAGCAAGTCGTCG
CTAGTGACTTGCGCACTATCGAACTGCAGTGCACTGGATTACTATAGTGA
GCATCCATTTCCGCTGGCACTGACGGTTTAATATACCTAACACCCCGCAG
TCACGCGGCATATGTATGAACTGGAATGCGATCAGCCCATTAAGAAGGGG
CCCCCTCTTGTCGATCCTTCGACTCTTGCACCAGCTATCCTCGCCACGAT
ATTCTTCTTTATCCGGATAGCTGCTAAACTCGCAAACCTCGCTGGTGGTT
GGGGACTTGACGACCTCACTGTCACGATCGCATGGGTAAGTGCTGCTGCA
TTGCCTGAGACCAGTGGAGCCTCTAACAGCTAGTAGATACTGGGAGTTGC
CTTGTTTGTTGTGAATACATACAGTAAGTCATTATCATCCTTCATTTCGT
GGCATCATGACTGACAAAATAGTGATCAAATACGGTTTCGGCATGAATAC
CTGGGATATCTTACCCTTCCACCACGTCACATTAGTCTTCCAGTACTTCG
AAGGTCTGGCGATGATGTACAAGATCCAAATCTCGCTCTGCAAGATATCC
GTCCTACTCTTCCTGCTGCGAATCTTCCAGTCCCGTGTTTTCCGCGTATG
CGCATATATACTCATCGCCATCAACGCCGCCATCGGCATCACGTTTTCCC
TCGTGGATCTGCTTCGCTGCGTGCCAGTCCACCTGGACTGGCATTCCTGG
ACCGGCGAATACGAGGGCGTGGGAACATGCATCAATTTCATCGCAGCAGT
TTTAGTCCACTGTCTTGTCAACATTTTCGTCGACGTCGTCATCGTCCTCC
TACCGATCTACGAAGTCAGCAAGTTGCAGCTGCCATGGATGAAGAAGATC
AACGTGGCACTGATGTTCATGATGGGTCTTATGTAAGGCTCACCTACTCA
TTCACCCCCTTCAAGCTTTGCTAACAAAGATCTTCTCAGTTTAACTATTA
TCGCTATCATTCGTGTGATCGTATTCTGGGAGAACCGCTGGACCACCAAC
TTGACCGGTACCACCTCACCCACCCTCACAACCTTTTCAAAGTCCACCCC
ACTAACACATAAATGTATTTACAGCCGGTCTCCAGCCCCTCATTCACTGG
TCCGTCATCGAATCCCAGATCGCAATCATGACGACCTGTCTCCCCGCCGC
CCGCGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCAGCACACAAC
GACGGACCTACGGCCGAACCAACTCTCTGTACAACAACGGAGGTGCATCC
TCAGGGGTCACCAACAGCAAGATTTCCAAGTCAGTGAATATCTCCGTTGA
CTATACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGCATTTGGTGG
ACATGGACGGGAGGTATGAACGGTTTTAAAAAATTCACAAACATTCCTTT
TTTCGACACATAGTACCGGTTTATTATTTTCTTATGTTTTTGATATCCCT
TGGGTTAGGTTATTTGATGATATTATACATTAGACGATAAAGAGACAGCG
AATAGTCAACATTTGAC back to topCoding sequence (CDS) from alignment at ch6:252577..254593+ >KJC3_007841-T2 ID=KJC3_007841-T2|Name=KJC3_007841-T2|organism=Aspergillus niger KJC3|type=CDS|length=5220bp|location=Sequence derived from alignment at ch6:252577..254593+ (Aspergillus niger KJC3)
ATGTATGAACTGGAATGCGATCAGCCCATTAAGAAGGGGCCCCCTCTTGT
CGATCCTTCGACTCTTGCACCAGCTATCCTCGCCACGATATTCTTCTTTA
TCCGGATAGCTGCTAAACTCGCAAACCTCGCTGGTGGTTGGGGACTTGAC
GACCTCACTGTCACGATCGCATGGATACTGGGAGTTGCCTTGTTTGTTGT
GAATACATACATGATCAAATACGGTTTCGGCATGAATACCTGGGATATCT
TACCCTTCCACCACGTCACATTAGTCTTCCAGTACTTCGAAGGTCTGGCG
ATGATGTACAAGATCCAAATCTCGCTCTGCAAGATATCCGTCCTACTCTT
CCTGCTGCGAATCTTCCAGTCCCGTGTTTTCCGCGTATGCGCATATATAC
TCATCGCCATCAACGCCGCCATCGGCATCACGTTTTCCCTCGTGGATCTG
CTTCGCTGCGTGCCAGTCCACCTGGACTGGCATTCCTGGACCGGCGAATA
CGAGGGCGTGGGAACATGCATCAATTTCATCGCAGCAGTTTTAGTCCACT
GTCTTGTCAACATTTTCGTCGACGTCGTCATCGTCCTCCTACCGATCTAC
GAAGTCAGCAAGTTGCAGCTGCCATGGATGAAGAAGATCAACGTGGCACT
GATGTTCATGATGGGTCTTATTTTAACTATTATCGCTATCATTCGTGTGA
TCGTATTCTGGGAGAACCGCTGGACCACCAACTTGACCGCCGGTCTCCAG
CCCCTCATTCACTGGTCCGTCATCGAATCCCAGATCGCAATCATGACGAC
CTGTCTCCCCGCCGCCCGCGCGTTCATAAACCAATACGTCCCAGGTCTTC
CCGGCAGCACACAACGACGGACCTACGGCCGAACCAACTCTCTGTACAAC
AACGGAGGTGCATCCTCAGGGGTCACCAACAGCAAGATTTCCAAGTCAGT
GAATATCTCCGTTGACTATACGACACGGTCGGAGAGGGATTCGACCAGCG
CTGTGCATTTGGTGGACATGGACGGGAGGTATGAACGGTTTTAAATGTAT
GAACTGGAATGCGATCAGCCCATTAAGAAGGGGCCCCCTCTTGTCGATCC
TTCGACTCTTGCACCAGCTATCCTCGCCACGATATTCTTCTTTATCCGGA
TAGCTGCTAAACTCGCAAACCTCGCTGGTGGTTGGGGACTTGACGACCTC
ACTGTCACGATCGCATGGATACTGGGAGTTGCCTTGTTTGTTGTGAATAC
ATACATGATCAAATACGGTTTCGGCATGAATACCTGGGATATCTTACCCT
TCCACCACGTCACATTAGTCTTCCAGTACTTCGAAGGTCTGGCGATGATG
TACAAGATCCAAATCTCGCTCTGCAAGATATCCGTCCTACTCTTCCTGCT
GCGAATCTTCCAGTCCCGTGTTTTCCGCGTATGCGCATATATACTCATCG
CCATCAACGCCGCCATCGGCATCACGTTTTCCCTCGTGGATCTGCTTCGC
TGCGTGCCAGTCCACCTGGACTGGCATTCCTGGACCGGCGAATACGAGGG
CGTGGGAACATGCATCAATTTCATCGCAGCAGTTTTAGTCCACTGTCTTG
TCAACATTTTCGTCGACGTCGTCATCGTCCTCCTACCGATCTACGAAGTC
AGCAAGTTGCAGCTGCCATGGATGAAGAAGATCAACGTGGCACTGATGTT
CATGATGGGTCTTATTTTAACTATTATCGCTATCATTCGTGTGATCGTAT
TCTGGGAGAACCGCTGGACCACCAACTTGACCGCCGGTCTCCAGCCCCTC
ATTCACTGGTCCGTCATCGAATCCCAGATCGCAATCATGACGACCTGTCT
CCCCGCCGCCCGCGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCA
GCACACAACGACGGACCTACGGCCGAACCAACTCTCTGTACAACAACGGA
GGTGCATCCTCAGGGGTCACCAACAGCAAGATTTCCAAGTCAGTGAATAT
CTCCGTTGACTATACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGC
ATTTGGTGGACATGGACGGGAGGTATGAACGGTTTTAAATGTATGAACTG
GAATGCGATCAGCCCATTAAGAAGGGGCCCCCTCTTGTCGATCCTTCGAC
TCTTGCACCAGCTATCCTCGCCACGATATTCTTCTTTATCCGGATAGCTG
CTAAACTCGCAAACCTCGCTGGTGGTTGGGGACTTGACGACCTCACTGTC
ACGATCGCATGGATACTGGGAGTTGCCTTGTTTGTTGTGAATACATACAT
GATCAAATACGGTTTCGGCATGAATACCTGGGATATCTTACCCTTCCACC
ACGTCACATTAGTCTTCCAGTACTTCGAAGGTCTGGCGATGATGTACAAG
ATCCAAATCTCGCTCTGCAAGATATCCGTCCTACTCTTCCTGCTGCGAAT
CTTCCAGTCCCGTGTTTTCCGCGTATGCGCATATATACTCATCGCCATCA
ACGCCGCCATCGGCATCACGTTTTCCCTCGTGGATCTGCTTCGCTGCGTG
CCAGTCCACCTGGACTGGCATTCCTGGACCGGCGAATACGAGGGCGTGGG
AACATGCATCAATTTCATCGCAGCAGTTTTAGTCCACTGTCTTGTCAACA
TTTTCGTCGACGTCGTCATCGTCCTCCTACCGATCTACGAAGTCAGCAAG
TTGCAGCTGCCATGGATGAAGAAGATCAACGTGGCACTGATGTTCATGAT
GGGTCTTATTTTAACTATTATCGCTATCATTCGTGTGATCGTATTCTGGG
AGAACCGCTGGACCACCAACTTGACCGCCGGTCTCCAGCCCCTCATTCAC
TGGTCCGTCATCGAATCCCAGATCGCAATCATGACGACCTGTCTCCCCGC
CGCCCGCGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCAGCACAC
AACGACGGACCTACGGCCGAACCAACTCTCTGTACAACAACGGAGGTGCA
TCCTCAGGGGTCACCAACAGCAAGATTTCCAAGTCAGTGAATATCTCCGT
TGACTATACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGCATTTGG
TGGACATGGACGGGAGGTATGAACGGTTTTAAATGTATGAACTGGAATGC
GATCAGCCCATTAAGAAGGGGCCCCCTCTTGTCGATCCTTCGACTCTTGC
ACCAGCTATCCTCGCCACGATATTCTTCTTTATCCGGATAGCTGCTAAAC
TCGCAAACCTCGCTGGTGGTTGGGGACTTGACGACCTCACTGTCACGATC
GCATGGATACTGGGAGTTGCCTTGTTTGTTGTGAATACATACATGATCAA
ATACGGTTTCGGCATGAATACCTGGGATATCTTACCCTTCCACCACGTCA
CATTAGTCTTCCAGTACTTCGAAGGTCTGGCGATGATGTACAAGATCCAA
ATCTCGCTCTGCAAGATATCCGTCCTACTCTTCCTGCTGCGAATCTTCCA
GTCCCGTGTTTTCCGCGTATGCGCATATATACTCATCGCCATCAACGCCG
CCATCGGCATCACGTTTTCCCTCGTGGATCTGCTTCGCTGCGTGCCAGTC
CACCTGGACTGGCATTCCTGGACCGGCGAATACGAGGGCGTGGGAACATG
CATCAATTTCATCGCAGCAGTTTTAGTCCACTGTCTTGTCAACATTTTCG
TCGACGTCGTCATCGTCCTCCTACCGATCTACGAAGTCAGCAAGTTGCAG
CTGCCATGGATGAAGAAGATCAACGTGGCACTGATGTTCATGATGGGTCT
TATTTTAACTATTATCGCTATCATTCGTGTGATCGTATTCTGGGAGAACC
GCTGGACCACCAACTTGACCGCCGGTCTCCAGCCCCTCATTCACTGGTCC
GTCATCGAATCCCAGATCGCAATCATGACGACCTGTCTCCCCGCCGCCCG
CGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCAGCACACAACGAC
GGACCTACGGCCGAACCAACTCTCTGTACAACAACGGAGGTGCATCCTCA
GGGGTCACCAACAGCAAGATTTCCAAGTCAGTGAATATCTCCGTTGACTA
TACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGCATTTGGTGGACA
TGGACGGGAGGTATGAACGGTTTTAAATGTATGAACTGGAATGCGATCAG
CCCATTAAGAAGGGGCCCCCTCTTGTCGATCCTTCGACTCTTGCACCAGC
TATCCTCGCCACGATATTCTTCTTTATCCGGATAGCTGCTAAACTCGCAA
ACCTCGCTGGTGGTTGGGGACTTGACGACCTCACTGTCACGATCGCATGG
ATACTGGGAGTTGCCTTGTTTGTTGTGAATACATACATGATCAAATACGG
TTTCGGCATGAATACCTGGGATATCTTACCCTTCCACCACGTCACATTAG
TCTTCCAGTACTTCGAAGGTCTGGCGATGATGTACAAGATCCAAATCTCG
CTCTGCAAGATATCCGTCCTACTCTTCCTGCTGCGAATCTTCCAGTCCCG
TGTTTTCCGCGTATGCGCATATATACTCATCGCCATCAACGCCGCCATCG
GCATCACGTTTTCCCTCGTGGATCTGCTTCGCTGCGTGCCAGTCCACCTG
GACTGGCATTCCTGGACCGGCGAATACGAGGGCGTGGGAACATGCATCAA
TTTCATCGCAGCAGTTTTAGTCCACTGTCTTGTCAACATTTTCGTCGACG
TCGTCATCGTCCTCCTACCGATCTACGAAGTCAGCAAGTTGCAGCTGCCA
TGGATGAAGAAGATCAACGTGGCACTGATGTTCATGATGGGTCTTATTTT
AACTATTATCGCTATCATTCGTGTGATCGTATTCTGGGAGAACCGCTGGA
CCACCAACTTGACCGCCGGTCTCCAGCCCCTCATTCACTGGTCCGTCATC
GAATCCCAGATCGCAATCATGACGACCTGTCTCCCCGCCGCCCGCGCGTT
CATAAACCAATACGTCCCAGGTCTTCCCGGCAGCACACAACGACGGACCT
ACGGCCGAACCAACTCTCTGTACAACAACGGAGGTGCATCCTCAGGGGTC
ACCAACAGCAAGATTTCCAAGTCAGTGAATATCTCCGTTGACTATACGAC
ACGGTCGGAGAGGGATTCGACCAGCGCTGTGCATTTGGTGGACATGGACG
GGAGGTATGAACGGTTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007841-T2.utr3p1 | KJC3_007841-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR008427 |
| DBxref | PFAM:PF05730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:252577..254593 + |
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