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KJC3_007847-T2, KJC3_007847-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007847-T2
Unique NameKJC3_007847-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:268789..270502-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007847-T2 ID=KJC3_007847-T2|Name=KJC3_007847-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1714bp|location=Sequence derived from alignment at ch6:268789..270502- (Aspergillus niger KJC3)
CGGAACTTTCCAAGGCTTCTTCCTTCTGGCTGCGCCTGGCTACTGTCACG
TGGGGCTGAGCCCCTTTTCCCCTCAACATCCTACATATGTCTCATCTGTC
TTCCTGAAGATGAAAATGTTGCGATAAACCTACGGTATGGCACCTACTCG
GTTGCGGCGTCTGGCCATCGTCGCCCTTATCGGCGCGGTGTTAATGATTT
GCATCTGCCAGCAACGTACCCAGTTCGACACTAGGCCGTTAGATCTTGAG
GATCAGTACCCACTACTGTACCGTCATGTCCACACACAGAGTACCGAGGG
AGGAGGTAGGCGATCATTCACAATGCTCTAGTATTAACTGACTGAACTAA
TTGTTCTATCTTGCAGCCTGGTATATCCCGCCACAATGGACCAACGCATC
GAAACCACCCCCGAAGAATATCGTCGAAGCGGCCGAGCTAGCTCTTAGCG
CCGCCCAAGCTTCCCCGGACGGGTACCTGCCTCATTCAACAATTCCCATG
ATCGTACACCAAACCTGGAAAAACACACGAATCGACACCTGGCCCCAAAT
CATCCGTCATAGCGCCGAGCGATGGCTTCAGACTACCAAAGGCCAGATGG
CCTACTTTCTGTGGACGGACGAAGGCATGGAACAATTTATTCACCATTTT
GAACCGGACTTGGAGAGCCAGTATGCGCATCTGGCGCGCAATGTTGAGCG
ATCGGATGTATTCCGCATCGTGATTTCCAAATGGATTGGAGGAGTGGTAG
GTGCACAAGAACAACTTCAGATTCGAACAGACTTTTTAATTTGAACAGTA
TGGCGATATCGACACTGAACCGCTTCGCACACCTGCCGACTGGATCACCC
CGACCGATCTCCACGCCTGGAACGATACACGAGCCGGTACATCCTATAAC
TCTACCGCTCCGGTACGCGCGATTGTCGGCCTCGAGGCTGATTGCCCTGA
GGGGTCCGATACGTACTGGCGCATGGGTTACTCGCAACCCGTGCAGCTCA
CGCAATGGGCGTTCGCCTGGGCCCCGGGCCATCCCATCCTGCAGAAGTTC
ATCGATCGGTTGTCAGCAACGATAGGAGATATTTCCGACCGCTACGGGGG
GTCACTCCAGTCGAGAGCTGCTCGACAGGAGCTTATGAATCTGGATCCGC
TCACGCTGACCGGTCCGGCTGCTTTCACCGACGTCGTGCGGAGTCGACTG
GAAGAAGTGGCCGGCTTACGCTGGCATGCACTGTCCGGTCTGAAGGACGG
AGGGAAGAGCAAGTTGGTAGACGATGTGCTTATTCTTCCAATTACTGGAT
TCAGGTATGTTGGCAGCCTCACCTAGTTAATGAAAAGTGTAAACAAAGCA
CTGACACAACGATAGTCCCGGACGTGGCACATATGGCAATATGGGATCTA
AGCCAATCACTGACCCTTCCGCACGCCTCAGGCATCTGGCACAGGGATCG
TGGAGAGCTTTCGACGTGAAAGTTGAGTATGGCAAATTCTGCCGGACTGT
CCTGGGAATGTGTCGCGATTGGTCAAAAGTGCCTACTGTTGTTGTTCAAT
GATTTGGAGTGTCTTTTTGAAATTTTTTTTCACCATCACTTCTCGTTGAC
ACATTCATGGCGTTCTTGGGGTTGGGGGGATCAGGATAACTAGCGAGTAT
AGTATCATAAACGGCATATAAGATACCCAATCAGACATTCACCAAGATTT
TCCAATGGTGGGAC
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Coding sequence (CDS) from alignment at ch6:268789..270502-

>KJC3_007847-T2 ID=KJC3_007847-T2|Name=KJC3_007847-T2|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch6:268789..270502- (Aspergillus niger KJC3)
TCCCGGACGTGGCACATATGGCAATATGGGATCTAAGCCAATCACTGACC
CTTCCGCACGCCTCAGGCATCTGGCACAGGGATCGTGGAGAGCTTTCGAC
GTGAAAGTTGAGTATGGCAAATTCTGCCGGACTGTCCTGGGAATGTGTCG
CGATTGGTCAAAAGTGCCTACTGTTGTTGTTCAATGATATGGCGATATCG
ACACTGAACCGCTTCGCACACCTGCCGACTGGATCACCCCGACCGATCTC
CACGCCTGGAACGATACACGAGCCGGTACATCCTATAACTCTACCGCTCC
GGTACGCGCGATTGTCGGCCTCGAGGCTGATTGCCCTGAGGGGTCCGATA
CGTACTGGCGCATGGGTTACTCGCAACCCGTGCAGCTCACGCAATGGGCG
TTCGCCTGGGCCCCGGGCCATCCCATCCTGCAGAAGTTCATCGATCGGTT
GTCAGCAACGATAGGAGATATTTCCGACCGCTACGGGGGGTCACTCCAGT
CGAGAGCTGCTCGACAGGAGCTTATGAATCTGGATCCGCTCACGCTGACC
GGTCCGGCTGCTTTCACCGACGTCGTGCGGAGTCGACTGGAAGAAGTGGC
CGGCTTACGCTGGCATGCACTGTCCGGTCTGAAGGACGGAGGGAAGAGCA
AGTTGGTAGACGATGTGCTTATTCTTCCAATTACTGGATTCAGATGATCG
TACACCAAACCTGGAAAAACACACGAATCGACACCTGGCCCCAAATCATC
CGTCATAGCGCCGAGCGATGGCTTCAGACTACCAAAGGCCAGATGGCCTA
CTTTCTGTGGACGGACGAAGGCATGGAACAATTTATTCACCATTTTGAAC
CGGACTTGGAGAGCCAGTATGCGCATCTGGCGCGCAATGTTGAGCGATCG
GATGTATTCCGCATCGTGATTTCCAAATGGATTGGAGGAGTGTCCCGGAC
GTGGCACATATGGCAATATGGGATCTAAGCCAATCACTGACCCTTCCGCA
CGCCTCAGGCATCTGGCACAGGGATCGTGGAGAGCTTTCGACGTGAAAGT
TGAGTATGGCAAATTCTGCCGGACTGTCCTGGGAATGTGTCGCGATTGGT
CAAAAGTGCCTACTGTTGTTGTTCAATGATATGGCGATATCGACACTGAA
CCGCTTCGCACACCTGCCGACTGGATCACCCCGACCGATCTCCACGCCTG
GAACGATACACGAGCCGGTACATCCTATAACTCTACCGCTCCGGTACGCG
CGATTGTCGGCCTCGAGGCTGATTGCCCTGAGGGGTCCGATACGTACTGG
CGCATGGGTTACTCGCAACCCGTGCAGCTCACGCAATGGGCGTTCGCCTG
GGCCCCGGGCCATCCCATCCTGCAGAAGTTCATCGATCGGTTGTCAGCAA
CGATAGGAGATATTTCCGACCGCTACGGGGGGTCACTCCAGTCGAGAGCT
GCTCGACAGGAGCTTATGAATCTGGATCCGCTCACGCTGACCGGTCCGGC
TGCTTTCACCGACGTCGTGCGGAGTCGACTGGAAGAAGTGGCCGGCTTAC
GCTGGCATGCACTGTCCGGTCTGAAGGACGGAGGGAAGAGCAAGTTGGTA
GACGATGTGCTTATTCTTCCAATTACTGGATTCAGATGATCGTACACCAA
ACCTGGAAAAACACACGAATCGACACCTGGCCCCAAATCATCCGTCATAG
CGCCGAGCGATGGCTTCAGACTACCAAAGGCCAGATGGCCTACTTTCTGT
GGACGGACGAAGGCATGGAACAATTTATTCACCATTTTGAACCGGACTTG
GAGAGCCAGTATGCGCATCTGGCGCGCAATGTTGAGCGATCGGATGTATT
CCGCATCGTGATTTCCAAATGGATTGGAGGAGTGTCCCGGACGTGGCACA
TATGGCAATATGGGATCTAAGCCAATCACTGACCCTTCCGCACGCCTCAG
GCATCTGGCACAGGGATCGTGGAGAGCTTTCGACGTGAAAGTTGAGTATG
GCAAATTCTGCCGGACTGTCCTGGGAATGTGTCGCGATTGGTCAAAAGTG
CCTACTGTTGTTGTTCAATGATATGGCGATATCGACACTGAACCGCTTCG
CACACCTGCCGACTGGATCACCCCGACCGATCTCCACGCCTGGAACGATA
CACGAGCCGGTACATCCTATAACTCTACCGCTCCGGTACGCGCGATTGTC
GGCCTCGAGGCTGATTGCCCTGAGGGGTCCGATACGTACTGGCGCATGGG
TTACTCGCAACCCGTGCAGCTCACGCAATGGGCGTTCGCCTGGGCCCCGG
GCCATCCCATCCTGCAGAAGTTCATCGATCGGTTGTCAGCAACGATAGGA
GATATTTCCGACCGCTACGGGGGGTCACTCCAGTCGAGAGCTGCTCGACA
GGAGCTTATGAATCTGGATCCGCTCACGCTGACCGGTCCGGCTGCTTTCA
CCGACGTCGTGCGGAGTCGACTGGAAGAAGTGGCCGGCTTACGCTGGCAT
GCACTGTCCGGTCTGAAGGACGGAGGGAAGAGCAAGTTGGTAGACGATGT
GCTTATTCTTCCAATTACTGGATTCAGATGATCGTACACCAAACCTGGAA
AAACACACGAATCGACACCTGGCCCCAAATCATCCGTCATAGCGCCGAGC
GATGGCTTCAGACTACCAAAGGCCAGATGGCCTACTTTCTGTGGACGGAC
GAAGGCATGGAACAATTTATTCACCATTTTGAACCGGACTTGGAGAGCCA
GTATGCGCATCTGGCGCGCAATGTTGAGCGATCGGATGTATTCCGCATCG
TGATTTCCAAATGGATTGGAGGAGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007847KJC3_007847Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007847-T2KJC3_007847-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007847-T2.cdsKJC3_007847-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007847-T2.utr3p1KJC3_007847-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007847-T2.exon4KJC3_007847-T2.exon4Aspergillus niger KJC3exon
KJC3_007847-T2.exon3KJC3_007847-T2.exon3Aspergillus niger KJC3exon
KJC3_007847-T2.exon2KJC3_007847-T2.exon2Aspergillus niger KJC3exon
KJC3_007847-T2.exon1KJC3_007847-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007847-T2.utr5p2KJC3_007847-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007847-T2.utr5p1KJC3_007847-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029044
DBxrefInterPro:IPR007577
DBxrefPFAM:PF04488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:268789..270502 -
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