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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:284002..285191- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007855-T1 ID=KJC3_007855-T1|Name=KJC3_007855-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1190bp|location=Sequence derived from alignment at ch6:284002..285191- (Aspergillus niger KJC3)
CTGCTCCAAGAATCTAAGCATCAGACGCTCTGGTTTTTCTCTATCTATAC
TGGGAGACGGACTCTATCCCAACAGTCTTCAACGTCCACACTCCTCGCCC
TACAAACACCCCAGAATGTTCCCTCCCGAACCCCGCCCCCGCATCGCCTG
CTTCCACGGCGGTGGCTCCAAAGCCGAAATCTACCGGATCCAATGCTCGC
GCCTCGCCAGCCTTCTTGAGAATGACTTTGAACTCGTCTTTTTCGAGGGT
CCCTACACCCGCGACGCTGGTCCCGGCGTCCTCCCCGCCTTTCGCGGCTA
CGAGCCATACAAATCATGGGTGACAAATGACAGCGACGGCAAGGAACTGG
TTGATGGAAGTGGGTATGATGATGTTGGACGGGACGGTATTGAGAGGGTT
TTGAAGCTGATGGTGCAACATGATCGGGAGCAAGATGAACCAGTCGGTCC
GTGGGTCGGTGCTATGGGATTCAGTCAGGGAACCAGAGTGGTGGGTGGAC
TGCTGTTGGATCAGCAGCGCAGAGCTGCCTCGGGCTGGGATGCGAATGAG
GGAATCCAGCTAAAGTTCGGAGTTTGTTGCATGGGTGCCGGAACACCACT
GGAATCGGAGGTGTCGAAGCGTATGTTTGCTTGTTCCTATCTATCTTTTG
CTTTGTCCGCGGAGTAATTGTCGCCCGGGTTTTTCTTCTTTCTGCCCCAT
TGACTTTGGTTTCTTTGCTTTGCTGGGTTTGCTTTGAAGATACTGACGTG
CCGCAGACTTCAACTTTGAAGATAATATCGTCTCGCTGCCTACGTTGCAC
GTTCACGGACTCAAGGACTGGGTATTGCCGCTCAGCCGACTTCAGTACGC
GAAATACTATGACTCGAAAACCAAGAAATTGTACGAGGTCGACTATCATC
ACGCCATGCCATGGAACACGCACGAGGTAGAGAAGTTGGCGGATTTAATA
CGGCAGATATACAAGGAGAATGCCTGAGAAGGTTCGTTGTCAAGTGTTTG
CCCGGATGGAGTGCTTTTTCGGATATGGCAAGGAAGATGGAGCTCAGAAA
TTGAGCTGTTCAACACGATATCATACATGATGCCAACAGACATAATGCAG
CATTCAGATTTAGAGATAGACGATCAGTATTTCCATGCACCTTTTAATAG
CTGCCAACTGGCCGACGAGATTGGCAAATTAGAATTTCAC back to topCoding sequence (CDS) from alignment at ch6:284002..285191- >KJC3_007855-T1 ID=KJC3_007855-T1|Name=KJC3_007855-T1|organism=Aspergillus niger KJC3|type=CDS|length=1452bp|location=Sequence derived from alignment at ch6:284002..285191- (Aspergillus niger KJC3)
ACTTCAACTTTGAAGATAATATCGTCTCGCTGCCTACGTTGCACGTTCAC
GGACTCAAGGACTGGGTATTGCCGCTCAGCCGACTTCAGTACGCGAAATA
CTATGACTCGAAAACCAAGAAATTGTACGAGGTCGACTATCATCACGCCA
TGCCATGGAACACGCACGAGGTAGAGAAGTTGGCGGATTTAATACGGCAG
ATATACAAGGAGAATGCCTGAATGTTCCCTCCCGAACCCCGCCCCCGCAT
CGCCTGCTTCCACGGCGGTGGCTCCAAAGCCGAAATCTACCGGATCCAAT
GCTCGCGCCTCGCCAGCCTTCTTGAGAATGACTTTGAACTCGTCTTTTTC
GAGGGTCCCTACACCCGCGACGCTGGTCCCGGCGTCCTCCCCGCCTTTCG
CGGCTACGAGCCATACAAATCATGGGTGACAAATGACAGCGACGGCAAGG
AACTGGTTGATGGAAGTGGGTATGATGATGTTGGACGGGACGGTATTGAG
AGGGTTTTGAAGCTGATGGTGCAACATGATCGGGAGCAAGATGAACCAGT
CGGTCCGTGGGTCGGTGCTATGGGATTCAGTCAGGGAACCAGAGTGGTGG
GTGGACTGCTGTTGGATCAGCAGCGCAGAGCTGCCTCGGGCTGGGATGCG
AATGAGGGAATCCAGCTAAAGTTCGGAGTTTGTTGCATGGGTGCCGGAAC
ACCACTGGAATCGGAGGTGTCGAAGCACTTCAACTTTGAAGATAATATCG
TCTCGCTGCCTACGTTGCACGTTCACGGACTCAAGGACTGGGTATTGCCG
CTCAGCCGACTTCAGTACGCGAAATACTATGACTCGAAAACCAAGAAATT
GTACGAGGTCGACTATCATCACGCCATGCCATGGAACACGCACGAGGTAG
AGAAGTTGGCGGATTTAATACGGCAGATATACAAGGAGAATGCCTGAATG
TTCCCTCCCGAACCCCGCCCCCGCATCGCCTGCTTCCACGGCGGTGGCTC
CAAAGCCGAAATCTACCGGATCCAATGCTCGCGCCTCGCCAGCCTTCTTG
AGAATGACTTTGAACTCGTCTTTTTCGAGGGTCCCTACACCCGCGACGCT
GGTCCCGGCGTCCTCCCCGCCTTTCGCGGCTACGAGCCATACAAATCATG
GGTGACAAATGACAGCGACGGCAAGGAACTGGTTGATGGAAGTGGGTATG
ATGATGTTGGACGGGACGGTATTGAGAGGGTTTTGAAGCTGATGGTGCAA
CATGATCGGGAGCAAGATGAACCAGTCGGTCCGTGGGTCGGTGCTATGGG
ATTCAGTCAGGGAACCAGAGTGGTGGGTGGACTGCTGTTGGATCAGCAGC
GCAGAGCTGCCTCGGGCTGGGATGCGAATGAGGGAATCCAGCTAAAGTTC
GGAGTTTGTTGCATGGGTGCCGGAACACCACTGGAATCGGAGGTGTCGAA
GC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007855-T1.utr3p1 | KJC3_007855-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007855-T1.utr5p1 | KJC3_007855-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR005645 |
| DBxref | PFAM:PF03959 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:284002..285191 - |
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