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KJC3_007876-T1, KJC3_007876-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007876-T1
Unique NameKJC3_007876-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:335358..336527-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007876-T1 ID=KJC3_007876-T1|Name=KJC3_007876-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1170bp|location=Sequence derived from alignment at ch6:335358..336527- (Aspergillus niger KJC3)
ATGCCGGCACCTTTTTCATCGTCCGAGTGCACCTACCTATATCGATATTT
TGCCTCCACGATTTTACCGCGTTTTGTTCGACGCAACTCGTTAGACAAGA
CACACATGCTCCGCCTCGCGCCCCAATTCTCTCCTCTCTTTGGGGCAATG
GTGGCTGTGGCCGGAATGCAGCTGCCAACCAAAGACCGGTGGCCTGCCCA
TCTTGCCCTGCAGAGCTATCTTCATGCAATTCATACCATTCAGATGTCAC
TAACTGATATTACCAAAGCTGCCTGTGATGATCGGATCCTCGCAACTGTG
TCTCTGCTCGCCTGTTTCGAGGCATGTGCCAGATTCCCTAAATCCGTGTA
AGCAAGCTAACTTCTATCACTGTAGTCTTGCCGATCAGATGCGACACCCA
CTGTGGCGCCGCATGTCACGGCTGCGGGCCTCCTACTTACCCAACGCCGA
CCTTGCGAGTTTCGCACCAAGGCTGCGGCCACGTTTGATCGCATATGTGT
CGAGTCATTTTTATACCAAGCATGCCTCATGATGATCTTTGACCCGACAC
TTGATGCGCTCCCGGATAATAGAGAGCAGCTGGAGCTCCCACTTTATTTT
GATCGACCCACAAGGTCAGACTCTACGCCAGGAGAGACTGTTCTGCAGGC
GTCTTACAAGTTCTTTTTACTCATTGCGGATGTAACGAAACTATCTCGGC
TATCAAGACCGCTTGATAGCGCTGAAGTGGCCAAGTGGCGAAGTCTAAAT
TGGGAGTTGTCGCGCTGGAGTCACCTCGTCTGTTCAGCAGATATGTCTCT
CGCGTTATGCTACCTAGCACTTCAAATCCTACTCCACAAGGCGAATCCGA
ACATCACCTCCAGTGAACGGGTCCGGCGAGTGCACTCGTGTCTCGCAGGG
GGTTTACAGCGGGTACCTGCGTTGGAAATAGATATTTACCCGCCCGTATA
TCTACTCTGGCCCATGGCTATCCTCGGCTCTGTTGCCGTAAGGCTCGAGG
AGAGGGAAGTTTTCCGGGATGTTGTCGCCTCAATATCTGCTGCAAAGCTA
GGTGGACATGCAGCTTGGGTACAGACGAGGTTAGACAGGGTTTGGAGAAT
TATCGGTTCTGCACCTGAAGACCCAGAAGCCAGTCTTGTTGGTCTCCAGC
TTCTGCTTGATCAGGGGTGA
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Coding sequence (CDS) from alignment at ch6:335358..336527-

>KJC3_007876-T1 ID=KJC3_007876-T1|Name=KJC3_007876-T1|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch6:335358..336527- (Aspergillus niger KJC3)
ATGCGACACCCACTGTGGCGCCGCATGTCACGGCTGCGGGCCTCCTACTT
ACCCAACGCCGACCTTGCGAGTTTCGCACCAAGGCTGCGGCCACGTTTGA
TCGCATATGTGTCGAGTCATTTTTATACCAAGCATGCCTCATGATGATCT
TTGACCCGACACTTGATGCGCTCCCGGATAATAGAGAGCAGCTGGAGCTC
CCACTTTATTTTGATCGACCCACAAGGTCAGACTCTACGCCAGGAGAGAC
TGTTCTGCAGGCGTCTTACAAGTTCTTTTTACTCATTGCGGATGTAACGA
AACTATCTCGGCTATCAAGACCGCTTGATAGCGCTGAAGTGGCCAAGTGG
CGAAGTCTAAATTGGGAGTTGTCGCGCTGGAGTCACCTCGTCTGTTCAGC
AGATATGTCTCTCGCGTTATGCTACCTAGCACTTCAAATCCTACTCCACA
AGGCGAATCCGAACATCACCTCCAGTGAACGGGTCCGGCGAGTGCACTCG
TGTCTCGCAGGGGGTTTACAGCGGGTACCTGCGTTGGAAATAGATATTTA
CCCGCCCGTATATCTACTCTGGCCCATGGCTATCCTCGGCTCTGTTGCCG
TAAGGCTCGAGGAGAGGGAAGTTTTCCGGGATGTTGTCGCCTCAATATCT
GCTGCAAAGCTAGGTGGACATGCAGCTTGGGTACAGACGAGGTTAGACAG
GGTTTGGAGAATTATCGGTTCTGCACCTGAAGACCCAGAAGCCAGTCTTG
TTGGTCTCCAGCTTCTGCTTGATCAGGGGTGAATGCCGGCACCTTTTTCA
TCGTCCGAGTGCACCTACCTATATCGATATTTTGCCTCCACGATTTTACC
GCGTTTTGTTCGACGCAACTCGTTAGACAAGACACACATGCTCCGCCTCG
CGCCCCAATTCTCTCCTCTCTTTGGGGCAATGGTGGCTGTGGCCGGAATG
CAGCTGCCAACCAAAGACCGGTGGCCTGCCCATCTTGCCCTGCAGAGCTA
TCTTCATGCAATTCATACCATTCAGATGTCACTAACTGATATTACCAAAG
CTGCCTGTGATGATCGGATCCTCGCAACTGTGTCTCTGCTCGCCTGTTTC
GAGGCATATGCGACACCCACTGTGGCGCCGCATGTCACGGCTGCGGGCCT
CCTACTTACCCAACGCCGACCTTGCGAGTTTCGCACCAAGGCTGCGGCCA
CGTTTGATCGCATATGTGTCGAGTCATTTTTATACCAAGCATGCCTCATG
ATGATCTTTGACCCGACACTTGATGCGCTCCCGGATAATAGAGAGCAGCT
GGAGCTCCCACTTTATTTTGATCGACCCACAAGGTCAGACTCTACGCCAG
GAGAGACTGTTCTGCAGGCGTCTTACAAGTTCTTTTTACTCATTGCGGAT
GTAACGAAACTATCTCGGCTATCAAGACCGCTTGATAGCGCTGAAGTGGC
CAAGTGGCGAAGTCTAAATTGGGAGTTGTCGCGCTGGAGTCACCTCGTCT
GTTCAGCAGATATGTCTCTCGCGTTATGCTACCTAGCACTTCAAATCCTA
CTCCACAAGGCGAATCCGAACATCACCTCCAGTGAACGGGTCCGGCGAGT
GCACTCGTGTCTCGCAGGGGGTTTACAGCGGGTACCTGCGTTGGAAATAG
ATATTTACCCGCCCGTATATCTACTCTGGCCCATGGCTATCCTCGGCTCT
GTTGCCGTAAGGCTCGAGGAGAGGGAAGTTTTCCGGGATGTTGTCGCCTC
AATATCTGCTGCAAAGCTAGGTGGACATGCAGCTTGGGTACAGACGAGGT
TAGACAGGGTTTGGAGAATTATCGGTTCTGCACCTGAAGACCCAGAAGCC
AGTCTTGTTGGTCTCCAGCTTCTGCTTGATCAGGGGTGAATGCCGGCACC
TTTTTCATCGTCCGAGTGCACCTACCTATATCGATATTTTGCCTCCACGA
TTTTACCGCGTTTTGTTCGACGCAACTCGTTAGACAAGACACACATGCTC
CGCCTCGCGCCCCAATTCTCTCCTCTCTTTGGGGCAATGGTGGCTGTGGC
CGGAATGCAGCTGCCAACCAAAGACCGGTGGCCTGCCCATCTTGCCCTGC
AGAGCTATCTTCATGCAATTCATACCATTCAGATGTCACTAACTGATATT
ACCAAAGCTGCCTGTGATGATCGGATCCTCGCAACTGTGTCTCTGCTCGC
CTGTTTCGAGGCAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007876KJC3_007876Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007876-T1KJC3_007876-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007876-T1.cdsKJC3_007876-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007876-T1.exon2KJC3_007876-T1.exon2Aspergillus niger KJC3exon
KJC3_007876-T1.exon1KJC3_007876-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:335358..336527 -
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