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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:335358..336527- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007876-T1 ID=KJC3_007876-T1|Name=KJC3_007876-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1170bp|location=Sequence derived from alignment at ch6:335358..336527- (Aspergillus niger KJC3)
ATGCCGGCACCTTTTTCATCGTCCGAGTGCACCTACCTATATCGATATTT
TGCCTCCACGATTTTACCGCGTTTTGTTCGACGCAACTCGTTAGACAAGA
CACACATGCTCCGCCTCGCGCCCCAATTCTCTCCTCTCTTTGGGGCAATG
GTGGCTGTGGCCGGAATGCAGCTGCCAACCAAAGACCGGTGGCCTGCCCA
TCTTGCCCTGCAGAGCTATCTTCATGCAATTCATACCATTCAGATGTCAC
TAACTGATATTACCAAAGCTGCCTGTGATGATCGGATCCTCGCAACTGTG
TCTCTGCTCGCCTGTTTCGAGGCATGTGCCAGATTCCCTAAATCCGTGTA
AGCAAGCTAACTTCTATCACTGTAGTCTTGCCGATCAGATGCGACACCCA
CTGTGGCGCCGCATGTCACGGCTGCGGGCCTCCTACTTACCCAACGCCGA
CCTTGCGAGTTTCGCACCAAGGCTGCGGCCACGTTTGATCGCATATGTGT
CGAGTCATTTTTATACCAAGCATGCCTCATGATGATCTTTGACCCGACAC
TTGATGCGCTCCCGGATAATAGAGAGCAGCTGGAGCTCCCACTTTATTTT
GATCGACCCACAAGGTCAGACTCTACGCCAGGAGAGACTGTTCTGCAGGC
GTCTTACAAGTTCTTTTTACTCATTGCGGATGTAACGAAACTATCTCGGC
TATCAAGACCGCTTGATAGCGCTGAAGTGGCCAAGTGGCGAAGTCTAAAT
TGGGAGTTGTCGCGCTGGAGTCACCTCGTCTGTTCAGCAGATATGTCTCT
CGCGTTATGCTACCTAGCACTTCAAATCCTACTCCACAAGGCGAATCCGA
ACATCACCTCCAGTGAACGGGTCCGGCGAGTGCACTCGTGTCTCGCAGGG
GGTTTACAGCGGGTACCTGCGTTGGAAATAGATATTTACCCGCCCGTATA
TCTACTCTGGCCCATGGCTATCCTCGGCTCTGTTGCCGTAAGGCTCGAGG
AGAGGGAAGTTTTCCGGGATGTTGTCGCCTCAATATCTGCTGCAAAGCTA
GGTGGACATGCAGCTTGGGTACAGACGAGGTTAGACAGGGTTTGGAGAAT
TATCGGTTCTGCACCTGAAGACCCAGAAGCCAGTCTTGTTGGTCTCCAGC
TTCTGCTTGATCAGGGGTGA back to topCoding sequence (CDS) from alignment at ch6:335358..336527- >KJC3_007876-T1 ID=KJC3_007876-T1|Name=KJC3_007876-T1|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch6:335358..336527- (Aspergillus niger KJC3)
ATGCGACACCCACTGTGGCGCCGCATGTCACGGCTGCGGGCCTCCTACTT
ACCCAACGCCGACCTTGCGAGTTTCGCACCAAGGCTGCGGCCACGTTTGA
TCGCATATGTGTCGAGTCATTTTTATACCAAGCATGCCTCATGATGATCT
TTGACCCGACACTTGATGCGCTCCCGGATAATAGAGAGCAGCTGGAGCTC
CCACTTTATTTTGATCGACCCACAAGGTCAGACTCTACGCCAGGAGAGAC
TGTTCTGCAGGCGTCTTACAAGTTCTTTTTACTCATTGCGGATGTAACGA
AACTATCTCGGCTATCAAGACCGCTTGATAGCGCTGAAGTGGCCAAGTGG
CGAAGTCTAAATTGGGAGTTGTCGCGCTGGAGTCACCTCGTCTGTTCAGC
AGATATGTCTCTCGCGTTATGCTACCTAGCACTTCAAATCCTACTCCACA
AGGCGAATCCGAACATCACCTCCAGTGAACGGGTCCGGCGAGTGCACTCG
TGTCTCGCAGGGGGTTTACAGCGGGTACCTGCGTTGGAAATAGATATTTA
CCCGCCCGTATATCTACTCTGGCCCATGGCTATCCTCGGCTCTGTTGCCG
TAAGGCTCGAGGAGAGGGAAGTTTTCCGGGATGTTGTCGCCTCAATATCT
GCTGCAAAGCTAGGTGGACATGCAGCTTGGGTACAGACGAGGTTAGACAG
GGTTTGGAGAATTATCGGTTCTGCACCTGAAGACCCAGAAGCCAGTCTTG
TTGGTCTCCAGCTTCTGCTTGATCAGGGGTGAATGCCGGCACCTTTTTCA
TCGTCCGAGTGCACCTACCTATATCGATATTTTGCCTCCACGATTTTACC
GCGTTTTGTTCGACGCAACTCGTTAGACAAGACACACATGCTCCGCCTCG
CGCCCCAATTCTCTCCTCTCTTTGGGGCAATGGTGGCTGTGGCCGGAATG
CAGCTGCCAACCAAAGACCGGTGGCCTGCCCATCTTGCCCTGCAGAGCTA
TCTTCATGCAATTCATACCATTCAGATGTCACTAACTGATATTACCAAAG
CTGCCTGTGATGATCGGATCCTCGCAACTGTGTCTCTGCTCGCCTGTTTC
GAGGCATATGCGACACCCACTGTGGCGCCGCATGTCACGGCTGCGGGCCT
CCTACTTACCCAACGCCGACCTTGCGAGTTTCGCACCAAGGCTGCGGCCA
CGTTTGATCGCATATGTGTCGAGTCATTTTTATACCAAGCATGCCTCATG
ATGATCTTTGACCCGACACTTGATGCGCTCCCGGATAATAGAGAGCAGCT
GGAGCTCCCACTTTATTTTGATCGACCCACAAGGTCAGACTCTACGCCAG
GAGAGACTGTTCTGCAGGCGTCTTACAAGTTCTTTTTACTCATTGCGGAT
GTAACGAAACTATCTCGGCTATCAAGACCGCTTGATAGCGCTGAAGTGGC
CAAGTGGCGAAGTCTAAATTGGGAGTTGTCGCGCTGGAGTCACCTCGTCT
GTTCAGCAGATATGTCTCTCGCGTTATGCTACCTAGCACTTCAAATCCTA
CTCCACAAGGCGAATCCGAACATCACCTCCAGTGAACGGGTCCGGCGAGT
GCACTCGTGTCTCGCAGGGGGTTTACAGCGGGTACCTGCGTTGGAAATAG
ATATTTACCCGCCCGTATATCTACTCTGGCCCATGGCTATCCTCGGCTCT
GTTGCCGTAAGGCTCGAGGAGAGGGAAGTTTTCCGGGATGTTGTCGCCTC
AATATCTGCTGCAAAGCTAGGTGGACATGCAGCTTGGGTACAGACGAGGT
TAGACAGGGTTTGGAGAATTATCGGTTCTGCACCTGAAGACCCAGAAGCC
AGTCTTGTTGGTCTCCAGCTTCTGCTTGATCAGGGGTGAATGCCGGCACC
TTTTTCATCGTCCGAGTGCACCTACCTATATCGATATTTTGCCTCCACGA
TTTTACCGCGTTTTGTTCGACGCAACTCGTTAGACAAGACACACATGCTC
CGCCTCGCGCCCCAATTCTCTCCTCTCTTTGGGGCAATGGTGGCTGTGGC
CGGAATGCAGCTGCCAACCAAAGACCGGTGGCCTGCCCATCTTGCCCTGC
AGAGCTATCTTCATGCAATTCATACCATTCAGATGTCACTAACTGATATT
ACCAAAGCTGCCTGTGATGATCGGATCCTCGCAACTGTGTCTCTGCTCGC
CTGTTTCGAGGCAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:335358..336527 - |
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