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KJC3_007888-T1, KJC3_007888-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007888-T1
Unique NameKJC3_007888-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:367323..369608-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007888-T1 ID=KJC3_007888-T1|Name=KJC3_007888-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2286bp|location=Sequence derived from alignment at ch6:367323..369608- (Aspergillus niger KJC3)
CCAGGAGTCACCACCCTTCCGACACAAAGTGCCATCCTGCCTCCGCAAAG
TAAGATGGGTTTCTTTCTTCGTCCCACTGGGAGTCAGTTTGCAAATCCCG
TGCAGTCAATCGGAATCGTTCCGTGGATTCCAACGGCAAGCACAGGGCGC
CCTTCCTTTCCCAAACCGAACGGACCCTTTGATCAGCATCACTCGTGAGC
TTGGGTCCCCATCGCACTCAGCATGACATTGAATAACTGTTTTGGCAAAG
TAGTTAAACAGATAATCTTCCGGTTCTTGCTGTTCCCGGTCTTGACTAAA
CAATAATCTTCCAGATCGGATTAGAAACCCAAGCCGTCAAACTCCTGGAT
CGATCCTTCAGGTCACAGTCTAGCCCGATGATATTCGTCCGAAACAGAGC
AAGCCATTGCTGGAGTCGATGCCAGCGCAAGGATCTGATACCTGTTCCGC
AAGTGTCAGTTGTTGTGATACACAACTAGACGGTCCCTTCTTATTGTAAC
AAATACTCTTATGACCAGGGGGACACAGTAATGCTGTGCTACGTCTGACT
ATAGCTACTACTATCGGTCGCCTATATCCGGATACAAGGATTCGGTACAG
TTATCGGGAATTTGAACCCCGCCAGTTCCATGGGATTTCCAACGGTCGGT
TACCACCCATTTTCTTGGGCCGGAGTTACGTCACTGCAGCCTCATCTAGA
ACAGACAAAGGTTGGTCAGAGCCGTAGCAGCCCCGTTCTAGATCTCTTGT
AACTTGACTTTCCTGTCGGGCATGCTTCTTGCTGTAGTTTGGAATCGAAT
CGAGCAATTACCACCGTGAGATCACTAGCTGTACGGTCAAGGGGATCATG
AGGTCATTGAGGTCAAGATACTCTACGTTTTGAATTTCATCCTTGAAGGC
AACGCTTCCCAAACCCTTTTCCGTTAATATACAAGGTATTGACTCGAATA
TCTGCGAAATGCCAAATTATGAAGCCCAAGACACCCAAGTACCAACATCT
CCAGTCTGCATCGCCATTTGGAATTTTTCCTCGCAATGGTTTCTCCTCCC
ACAAGGTACTGGCGTATTAGCCGTTATTCTTCATCAACTGGACTACCAAT
TCAAGGGCTTGCGTATTATCTCTGTGATAGTTTGGGTATATACAATTGTT
CTCCTGACACTATGCGTATCCGTCTACCTTGCGCGAATCTTCATGTATCC
ACAGAACGTCGCACGAGCCCTCCGGACAAGCATGGTAGAGGTATCATGCC
TTGCTAGTGTCTCTATAACGTTCACGACTATCATTCAGATGATCGCCTTA
GCCGTTGCTCAGCAATGGGGCGCAGGATGGCCAATGGCCTCATACGTTCT
GTGGTGGATCAATACGGCTATGGCTTTGTTTGCTGTTATGGGAATACCGT
ACATTTTCGTGAAGCTACAAGCTCCCGGGATCAAAGCTATTGTACCTGCC
GTTCTGCTTCCATTGATATCTGCGTTGACCTCCGCCGCGGGCGGAGGTGT
CATATGTGAGTATAGTGGAATTGGTGCTCGACTGCAAGTCCCGGTTATCA
TTGTAGCATACCTTGAAGTCGGCGTCGGAATCCCCATGGCCATGGCCTTT
GCCGATGTCTTCATTGCGCGTCTCTTTGAGCGCGAATTCATGCCCATGGA
TCAAGCCTACCAAGATATGATTCTCTGTGGTCCGTTTGGACAGGGCAGCT
TTGCGCTGCTCATTCTCGGGCAGGTTGTACGATCTGGGGCATTTGCTGCG
TACAATCGGGGGTCATTCCTGACCGCTGAAGCAGCGATCCCAATTGGCTT
TGCCAGTCAATTTGCCGGTTTGCTCTCTTGGGGCTACGGGACATTTTGGT
GGGGCTACGCCATCATAAGTATTTTGCATACTGCTTTCAAACAACCCGGA
GGCTGGCGGAGGATGCAGTATTCACTTTCAGCCTGGTCTCTGGTCTTTCC
ATGGGTGAGTGTATGCTCCTTAATTTTTGAGATTCATGATCTGACAGGAT
CTTGCAGGGTGTATATGCCAATGGCGCCGTCCAGCTTGGGAAAGTCATGG
ACTCCCCCGCATTCAAAGTGTGGTCCACTGCACTAACCCTCATGCTTATC
ATTATCTGGATTGTGAATCACATATTCACCATTAGAGGCTTAATTACGGG
GCGAATCCTGTCACTTCAGCATGGGTGGCGGGTCGGTCAATACCAAGCCG
GAGAAGTCGATAAGCAGGTCTAACGCGAGTCAGATACAACGGCTATATGC
GTGCAATATCTCCAATTTTATTATCCTGTAATGTAT
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Coding sequence (CDS) from alignment at ch6:367323..369608-

>KJC3_007888-T1 ID=KJC3_007888-T1|Name=KJC3_007888-T1|organism=Aspergillus niger KJC3|type=CDS|length=2424bp|location=Sequence derived from alignment at ch6:367323..369608- (Aspergillus niger KJC3)
GGTGTATATGCCAATGGCGCCGTCCAGCTTGGGAAAGTCATGGACTCCCC
CGCATTCAAAGTGTGGTCCACTGCACTAACCCTCATGCTTATCATTATCT
GGATTGTGAATCACATATTCACCATTAGAGGCTTAATTACGGGGCGAATC
CTGTCACTTCAGCATGGGTGGCGGGTCGGTCAATACCAAGCCGGAGAAGT
CGATAAGCAGGTCTAAATGCCAAATTATGAAGCCCAAGACACCCAAGTAC
CAACATCTCCAGTCTGCATCGCCATTTGGAATTTTTCCTCGCAATGGTTT
CTCCTCCCACAAGGTACTGGCGTATTAGCCGTTATTCTTCATCAACTGGA
CTACCAATTCAAGGGCTTGCGTATTATCTCTGTGATAGTTTGGGTATATA
CAATTGTTCTCCTGACACTATGCGTATCCGTCTACCTTGCGCGAATCTTC
ATGTATCCACAGAACGTCGCACGAGCCCTCCGGACAAGCATGGTAGAGGT
ATCATGCCTTGCTAGTGTCTCTATAACGTTCACGACTATCATTCAGATGA
TCGCCTTAGCCGTTGCTCAGCAATGGGGCGCAGGATGGCCAATGGCCTCA
TACGTTCTGTGGTGGATCAATACGGCTATGGCTTTGTTTGCTGTTATGGG
AATACCGTACATTTTCGTGAAGCTACAAGCTCCCGGGATCAAAGCTATTG
TACCTGCCGTTCTGCTTCCATTGATATCTGCGTTGACCTCCGCCGCGGGC
GGAGGTGTCATATGTGAGTATAGTGGAATTGGTGCTCGACTGCAAGTCCC
GGTTATCATTGTAGCATACCTTGAAGTCGGCGTCGGAATCCCCATGGCCA
TGGCCTTTGCCGATGTCTTCATTGCGCGTCTCTTTGAGCGCGAATTCATG
CCCATGGATCAAGCCTACCAAGATATGATTCTCTGTGGTCCGTTTGGACA
GGGCAGCTTTGCGCTGCTCATTCTCGGGCAGGTTGTACGATCTGGGGCAT
TTGCTGCGTACAATCGGGGGTCATTCCTGACCGCTGAAGCAGCGATCCCA
ATTGGCTTTGCCAGTCAATTTGCCGGTTTGCTCTCTTGGGGCTACGGGAC
ATTTTGGTGGGGCTACGCCATCATAAGTATTTTGCATACTGCTTTCAAAC
AACCCGGAGGCTGGCGGAGGATGCAGTATTCACTTTCAGCCTGGTCTCTG
GTCTTTCCATGGGGTGTATATGCCAATGGCGCCGTCCAGCTTGGGAAAGT
CATGGACTCCCCCGCATTCAAAGTGTGGTCCACTGCACTAACCCTCATGC
TTATCATTATCTGGATTGTGAATCACATATTCACCATTAGAGGCTTAATT
ACGGGGCGAATCCTGTCACTTCAGCATGGGTGGCGGGTCGGTCAATACCA
AGCCGGAGAAGTCGATAAGCAGGTCTAAATGCCAAATTATGAAGCCCAAG
ACACCCAAGTACCAACATCTCCAGTCTGCATCGCCATTTGGAATTTTTCC
TCGCAATGGTTTCTCCTCCCACAAGGTACTGGCGTATTAGCCGTTATTCT
TCATCAACTGGACTACCAATTCAAGGGCTTGCGTATTATCTCTGTGATAG
TTTGGGTATATACAATTGTTCTCCTGACACTATGCGTATCCGTCTACCTT
GCGCGAATCTTCATGTATCCACAGAACGTCGCACGAGCCCTCCGGACAAG
CATGGTAGAGGTATCATGCCTTGCTAGTGTCTCTATAACGTTCACGACTA
TCATTCAGATGATCGCCTTAGCCGTTGCTCAGCAATGGGGCGCAGGATGG
CCAATGGCCTCATACGTTCTGTGGTGGATCAATACGGCTATGGCTTTGTT
TGCTGTTATGGGAATACCGTACATTTTCGTGAAGCTACAAGCTCCCGGGA
TCAAAGCTATTGTACCTGCCGTTCTGCTTCCATTGATATCTGCGTTGACC
TCCGCCGCGGGCGGAGGTGTCATATGTGAGTATAGTGGAATTGGTGCTCG
ACTGCAAGTCCCGGTTATCATTGTAGCATACCTTGAAGTCGGCGTCGGAA
TCCCCATGGCCATGGCCTTTGCCGATGTCTTCATTGCGCGTCTCTTTGAG
CGCGAATTCATGCCCATGGATCAAGCCTACCAAGATATGATTCTCTGTGG
TCCGTTTGGACAGGGCAGCTTTGCGCTGCTCATTCTCGGGCAGGTTGTAC
GATCTGGGGCATTTGCTGCGTACAATCGGGGGTCATTCCTGACCGCTGAA
GCAGCGATCCCAATTGGCTTTGCCAGTCAATTTGCCGGTTTGCTCTCTTG
GGGCTACGGGACATTTTGGTGGGGCTACGCCATCATAAGTATTTTGCATA
CTGCTTTCAAACAACCCGGAGGCTGGCGGAGGATGCAGTATTCACTTTCA
GCCTGGTCTCTGGTCTTTCCATGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007888KJC3_007888Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007888-T1KJC3_007888-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007888-T1.cdsKJC3_007888-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007888-T1.utr3p1KJC3_007888-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007888-T1.exon3KJC3_007888-T1.exon3Aspergillus niger KJC3exon
KJC3_007888-T1.exon2KJC3_007888-T1.exon2Aspergillus niger KJC3exon
KJC3_007888-T1.exon1KJC3_007888-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007888-T1.utr5p2KJC3_007888-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007888-T1.utr5p1KJC3_007888-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038665
DBxrefInterPro:IPR004695
DBxrefPFAM:PF03595
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:367323..369608 -
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