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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:457249..458806+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007923-T1 ID=KJC3_007923-T1|Name=KJC3_007923-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1558bp|location=Sequence derived from alignment at ch6:457249..458806+ (Aspergillus niger KJC3)
ATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCC
TTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATAT
GCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAA
TAACACTTACCATATCAACTCTGTTATGAACACGATATGGCTCGATGATG
TGGAGATTGATCTACAGGGTACACTCTTGGTAAATAAATTACCTCGGTAT
GTAATATTAGTTTCTTGTTTGTTTCTGACAATGGACAGTGGAGCACCAAC
ATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATC
CACTGCCTGGATCTTGGGTGGCAAAGACATTACCTTTGAAGGACATGGAT
ACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCG
ACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAAT
GGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGTAGG
TATCGTTATTCATATTGCGCCATCTTGCTAAATGAATGCATGTAGCTAAC
AATACAGGACAATGTCTATCATTCACACCTCGAACTCATGGTTCGATTCC
ATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACGTTAGTACCG
TTCCGCATGTTGAATCGGGATGCAAGTCACGCCTCTGACCCTATTTAAAT
AGAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTCA
CGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAAT
TCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCAT
TGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAAC
GCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTAC
TTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGG
CGGGGGTTTGGGATGTACGTCCGCGTAAATTTATCCAAGTCCTTTGTTGA
TTTTAACCATCCTACCATGGCAGATGCATCCGACATCGTCGCAACCAACT
TGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACG
ACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCG
CGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTG
CGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAG
AATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTATCT
GTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGT
GTGTTGGGTCAAGTGCTACTGGGGGATGTTAGCCTAGCAAACAGGTTCTC
GTTGAGGC back to topCoding sequence (CDS) from alignment at ch6:457249..458806+ >KJC3_007923-T1 ID=KJC3_007923-T1|Name=KJC3_007923-T1|organism=Aspergillus niger KJC3|type=CDS|length=6450bp|location=Sequence derived from alignment at ch6:457249..458806+ (Aspergillus niger KJC3)
ATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCC
TTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATAT
GCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAA
TAACACTTACCATATCAACTCTGTTATGAACACGATATGGCTCGATGATG
TGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTAC
TGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTG
GATCTTGGGTGGCAAAGACATTACCTTTGAAGGACATGGATACGGAACAT
TCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAAT
TACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGT
CTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGACAATGTCTATCA
TTCACACCTCGAACTCATGGTTCGATTCCATCTACGTGAACAATCTGTAT
GATGACGGCGATTCAGCACAGAACACCGACGGTGCAAATACTATCTACAG
CAAAAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAGTA
TCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTC
ACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGC
TTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATGAGAAGA
CAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATAC
CCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGC
AACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTC
AGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTT
CAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTC
AGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCA
CTATCGAGAATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAA
GAGTATCTGTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGG
AGATGTGTGTGTTGGGTCAAGTGCTACTGGGGGATGTTAGATGGCACCTA
TAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCG
CTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAA
ACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGC
TGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTAC
CATATCAACTCTGTTATGAACACGATATGGCTCGATGATGTGGAGATTGA
TCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTACTGGCTTAACC
ACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGT
GGCAAAGACATTACCTTTGAAGGACATGGATACGGAACATTCAATGGAAG
TGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGC
GACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGG
TTGCGATTCGTGCAGAGCCAGATGTGGACAATGTCTATCATTCACACCTC
GAACTCATGGTTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCG
ATTCAGCACAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATC
ACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAA
AGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCC
TAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACT
GTTGAACGCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGC
CGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATG
GAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTG
AAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACGAC
GTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGCG
ATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGCG
AGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAA
TGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTATCTGT
GTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGTGT
GTTGGGTCAAGTGCTACTGGGGGATGTTAGATGGCACCTATAGCGTTGAA
AATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACC
AAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGA
TCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGCTGACTACCTG
TGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACT
CTGTTATGAACACGATATGGCTCGATGATGTGGAGATTGATCTACAGGGT
ACACTCTTGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCC
CGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACA
TTACCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACC
TGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCA
GCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCG
TGCAGAGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCATGG
TTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACA
GAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTCACGA
ACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCT
ACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGC
CATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCC
TTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACTTC
AAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGG
GGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACA
ACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGT
GCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTT
CACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGT
GTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATGTAAGTTTG
CGAATAGCGGGGAATACGACCCATGCAGAAGAGTATCTGTGTGGGAATGT
GGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGTGTGTTGGGTCAA
GTGCTACTGGGGGATGTTAGATGGCACCTATAGCGTTGAAAATCCTCCTC
TTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAA
TGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAA
TTGATGATGTGCCTGCAATTGTCGACGCGCTGACTACCTGTGGTTCCGGT
GGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTTATGAA
CACGATATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGT
GGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTAC
CAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTACCTTTGA
AGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAAT
ATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTC
TCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCA
GATGTGGACAATGTCTATCATTCACACCTCGAACTCATGGTTCGATTCCA
TCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACAGAACACCGAC
GGTGCAAATACTATCTACAGCAAAAACATCACATTCACGAACTGGGAAGT
CGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCA
CGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGT
ATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTC
AAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGA
CGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGA
TATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGG
TGCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGA
ACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATC
TCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGT
TGCCCCGTGTGAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGG
GGAATACGACCCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACC
GTTGGGTTCAATTGCACTGGAGATGTGTGTGTTGGGTCAAGTGCTACTGG
GGGATGTTAGATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTC
TCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCA
AGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGT
GCCTGCAATTGTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGA
TATTCTCAAATAACACTTACCATATCAACTCTGTTATGAACACGATATGG
CTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAA
CATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAAT
CCACTGCCTGGATCTTGGGTGGCAAAGACATTACCTTTGAAGGACATGGA
TACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATC
GACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAA
TGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGACA
ATGTCTATCATTCACACCTCGAACTCATGGTTCGATTCCATCTACGTGAA
CAATCTGTATGATGACGGCGATTCAGCACAGAACACCGACGGTGCAAATA
CTATCTACAGCAAAAACATCACATTCACGAACTGGGAAGTCGTCAACGGT
GATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAA
CTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAAT
ATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACA
TATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCA
GGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCG
ACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTT
ACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAA
TTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGA
CAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGT
GAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGGGGAATACGAC
CCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACCGTTGGGTTCA
ATTGCACTGGAGATGTGTGTGTTGGGTCAAGTGCTACTGGGGGATGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007923-T1.utr3p1 | KJC3_007923-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:457249..458806 + |
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