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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:466260..467668+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007928-T1 ID=KJC3_007928-T1|Name=KJC3_007928-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1409bp|location=Sequence derived from alignment at ch6:466260..467668+ (Aspergillus niger KJC3)
ATGCCCTCGCGCACCGACGCTCCCCTCGATATTGCCGTCATCGGCGCCGG
TCTAGGCGGCCTGAGTGCAGCCGTGGCTTTACGTCGCCAAGGTCATCGAA
TCACCGTCTACGAGCGATATGATTTTGCTGGCGAAGTGGGTGCTTCCTTG
AGCGCAGCTTCCAATGGATCCCGGTTTCTGGAGCAATGGGGTGTCGACGT
TAAGGCTGCCAAACCGGTGGTTTTGAAGAAGCTCATTATGCATGAATGGG
AGTCTGGGGCAATACAGAGCGAATATGGTCTTGGGGACTATAAGGCCAAA
TTTGGGACGGTCAGTCTGGGATTCAATTGTCACTTCAGAATCTGTCATTG
ACGTGGACGACTTTCCTCAGGAATACAACAACTTCCATCGCATTGACATC
CACCAACAATTACTTAAGTCTGCTTTTGAAGAGCCGGGCGAAGGCACTCC
CTGCACATTGAAAGTGAATCACAAGGCCGTGTCGCTAGATGCAGAGGCCG
GTCGCATAGTGTTCGACAATGGTGAGACGGCGTCAGCAGACCTCATCATC
GCCGCGGATGGCATTCGCGTTAGTATTCCTATCGTCTTTATCGATTGCCA
TGAGATATGAGAAGAGATGAACTAACAACATAATGCAGTCTCAAAGCCGC
CTTGATATGGGAATCACTCCCGAGTTCACCATGTCAACTTCATGCTGCTA
CCGCTGCATCATTAGCGCCGAGAAGCTCCGCAGCCTCGGGCTAGACGACT
ACATCGACAATGAGGCAATAGAATACTGGGGTGGATTTGGGATCAACAAA
ATTGTCATGTCACCCTGCAGTAACGGGGATGTCGTGAGCTGCTACTGCTT
CTATCCGGCGGAGTACAACAATTTGCGTGACGATGGCTGGAATATCTCGG
CGACTCCGGAGCAGCTGGTCGATACCTTTCCGGGACTGGATGAACGCATG
AAATTGTTGATGATGAACGCTGAGGACATTAAGATGTGGCGCTGTAGGGA
CCCCTCTCCTGTGTTTGAGTCTCTCTGCTAATAACCGACAGTGTACCGTC
ACCAACCATACCCCTACTGGGCCAAAGGCAAAGTATGCCTGCTAGGTGAT
GCCGCCCATCCGATGATGCCCGATCAGTCGCAGGGTTCGTGTATGGCCTT
CGAGGACGCCGGCGCGCTGGGATTGATCTTCCACCGCACGTTCCGGGAAG
AGTACAGTGTCGCAGAGGGCCTACAGCTATACGAGCGGCTACGGAAGCCA
CGAGCCACGAAGATACAAGAGGCCAGTTTTCGTGCACGCGAGGACCTCAG
CGAGCGCATTGGATGGAGCTCGTCCACGGATCGGCCGGGGAAGTTGACCA
TCGAAGAGGTATGTGGGTACAATATGCGAAAACATCTGGAAGAATTGAAA
GCCCAGTAG back to topCoding sequence (CDS) from alignment at ch6:466260..467668+ >KJC3_007928-T1 ID=KJC3_007928-T1|Name=KJC3_007928-T1|organism=Aspergillus niger KJC3|type=CDS|length=4920bp|location=Sequence derived from alignment at ch6:466260..467668+ (Aspergillus niger KJC3)
ATGCCCTCGCGCACCGACGCTCCCCTCGATATTGCCGTCATCGGCGCCGG
TCTAGGCGGCCTGAGTGCAGCCGTGGCTTTACGTCGCCAAGGTCATCGAA
TCACCGTCTACGAGCGATATGATTTTGCTGGCGAAGTGGGTGCTTCCTTG
AGCGCAGCTTCCAATGGATCCCGGTTTCTGGAGCAATGGGGTGTCGACGT
TAAGGCTGCCAAACCGGTGGTTTTGAAGAAGCTCATTATGCATGAATGGG
AGTCTGGGGCAATACAGAGCGAATATGGTCTTGGGGACTATAAGGCCAAA
TTTGGGACGGAATACAACAACTTCCATCGCATTGACATCCACCAACAATT
ACTTAAGTCTGCTTTTGAAGAGCCGGGCGAAGGCACTCCCTGCACATTGA
AAGTGAATCACAAGGCCGTGTCGCTAGATGCAGAGGCCGGTCGCATAGTG
TTCGACAATGGTGAGACGGCGTCAGCAGACCTCATCATCGCCGCGGATGG
CATTCGCTCTCAAAGCCGCCTTGATATGGGAATCACTCCCGAGTTCACCA
TGTCAACTTCATGCTGCTACCGCTGCATCATTAGCGCCGAGAAGCTCCGC
AGCCTCGGGCTAGACGACTACATCGACAATGAGGCAATAGAATACTGGGG
TGGATTTGGGATCAACAAAATTGTCATGTCACCCTGCAGTAACGGGGATG
TCGTGAGCTGCTACTGCTTCTATCCGGCGGAGTACAACAATTTGCGTGAC
GATGGCTGGAATATCTCGGCGACTCCGGAGCAGCTGGTCGATACCTTTCC
GGGACTGGATGAACGCATGAAATTGTTGATGATGAACGCTGAGGACATTA
AGATGTGGCGCTTGTACCGTCACCAACCATACCCCTACTGGGCCAAAGGC
AAAGTATGCCTGCTAGGTGATGCCGCCCATCCGATGATGCCCGATCAGTC
GCAGGGTTCGTGTATGGCCTTCGAGGACGCCGGCGCGCTGGGATTGATCT
TCCACCGCACGTTCCGGGAAGAGTACAGTGTCGCAGAGGGCCTACAGCTA
TACGAGCGGCTACGGAAGCCACGAGCCACGAAGATACAAGAGGCCAGTTT
TCGTGCACGCGAGGACCTCAGCGAGCGCATTGGATGGAGCTCGTCCACGG
ATCGGCCGGGGAAGTTGACCATCGAAGAGGTATGTGGGTACAATATGCGA
AAACATCTGGAAGAATTGAAAGCCCAGTAGATGCCCTCGCGCACCGACGC
TCCCCTCGATATTGCCGTCATCGGCGCCGGTCTAGGCGGCCTGAGTGCAG
CCGTGGCTTTACGTCGCCAAGGTCATCGAATCACCGTCTACGAGCGATAT
GATTTTGCTGGCGAAGTGGGTGCTTCCTTGAGCGCAGCTTCCAATGGATC
CCGGTTTCTGGAGCAATGGGGTGTCGACGTTAAGGCTGCCAAACCGGTGG
TTTTGAAGAAGCTCATTATGCATGAATGGGAGTCTGGGGCAATACAGAGC
GAATATGGTCTTGGGGACTATAAGGCCAAATTTGGGACGGAATACAACAA
CTTCCATCGCATTGACATCCACCAACAATTACTTAAGTCTGCTTTTGAAG
AGCCGGGCGAAGGCACTCCCTGCACATTGAAAGTGAATCACAAGGCCGTG
TCGCTAGATGCAGAGGCCGGTCGCATAGTGTTCGACAATGGTGAGACGGC
GTCAGCAGACCTCATCATCGCCGCGGATGGCATTCGCTCTCAAAGCCGCC
TTGATATGGGAATCACTCCCGAGTTCACCATGTCAACTTCATGCTGCTAC
CGCTGCATCATTAGCGCCGAGAAGCTCCGCAGCCTCGGGCTAGACGACTA
CATCGACAATGAGGCAATAGAATACTGGGGTGGATTTGGGATCAACAAAA
TTGTCATGTCACCCTGCAGTAACGGGGATGTCGTGAGCTGCTACTGCTTC
TATCCGGCGGAGTACAACAATTTGCGTGACGATGGCTGGAATATCTCGGC
GACTCCGGAGCAGCTGGTCGATACCTTTCCGGGACTGGATGAACGCATGA
AATTGTTGATGATGAACGCTGAGGACATTAAGATGTGGCGCTTGTACCGT
CACCAACCATACCCCTACTGGGCCAAAGGCAAAGTATGCCTGCTAGGTGA
TGCCGCCCATCCGATGATGCCCGATCAGTCGCAGGGTTCGTGTATGGCCT
TCGAGGACGCCGGCGCGCTGGGATTGATCTTCCACCGCACGTTCCGGGAA
GAGTACAGTGTCGCAGAGGGCCTACAGCTATACGAGCGGCTACGGAAGCC
ACGAGCCACGAAGATACAAGAGGCCAGTTTTCGTGCACGCGAGGACCTCA
GCGAGCGCATTGGATGGAGCTCGTCCACGGATCGGCCGGGGAAGTTGACC
ATCGAAGAGGTATGTGGGTACAATATGCGAAAACATCTGGAAGAATTGAA
AGCCCAGTAGATGCCCTCGCGCACCGACGCTCCCCTCGATATTGCCGTCA
TCGGCGCCGGTCTAGGCGGCCTGAGTGCAGCCGTGGCTTTACGTCGCCAA
GGTCATCGAATCACCGTCTACGAGCGATATGATTTTGCTGGCGAAGTGGG
TGCTTCCTTGAGCGCAGCTTCCAATGGATCCCGGTTTCTGGAGCAATGGG
GTGTCGACGTTAAGGCTGCCAAACCGGTGGTTTTGAAGAAGCTCATTATG
CATGAATGGGAGTCTGGGGCAATACAGAGCGAATATGGTCTTGGGGACTA
TAAGGCCAAATTTGGGACGGAATACAACAACTTCCATCGCATTGACATCC
ACCAACAATTACTTAAGTCTGCTTTTGAAGAGCCGGGCGAAGGCACTCCC
TGCACATTGAAAGTGAATCACAAGGCCGTGTCGCTAGATGCAGAGGCCGG
TCGCATAGTGTTCGACAATGGTGAGACGGCGTCAGCAGACCTCATCATCG
CCGCGGATGGCATTCGCTCTCAAAGCCGCCTTGATATGGGAATCACTCCC
GAGTTCACCATGTCAACTTCATGCTGCTACCGCTGCATCATTAGCGCCGA
GAAGCTCCGCAGCCTCGGGCTAGACGACTACATCGACAATGAGGCAATAG
AATACTGGGGTGGATTTGGGATCAACAAAATTGTCATGTCACCCTGCAGT
AACGGGGATGTCGTGAGCTGCTACTGCTTCTATCCGGCGGAGTACAACAA
TTTGCGTGACGATGGCTGGAATATCTCGGCGACTCCGGAGCAGCTGGTCG
ATACCTTTCCGGGACTGGATGAACGCATGAAATTGTTGATGATGAACGCT
GAGGACATTAAGATGTGGCGCTTGTACCGTCACCAACCATACCCCTACTG
GGCCAAAGGCAAAGTATGCCTGCTAGGTGATGCCGCCCATCCGATGATGC
CCGATCAGTCGCAGGGTTCGTGTATGGCCTTCGAGGACGCCGGCGCGCTG
GGATTGATCTTCCACCGCACGTTCCGGGAAGAGTACAGTGTCGCAGAGGG
CCTACAGCTATACGAGCGGCTACGGAAGCCACGAGCCACGAAGATACAAG
AGGCCAGTTTTCGTGCACGCGAGGACCTCAGCGAGCGCATTGGATGGAGC
TCGTCCACGGATCGGCCGGGGAAGTTGACCATCGAAGAGGTATGTGGGTA
CAATATGCGAAAACATCTGGAAGAATTGAAAGCCCAGTAGATGCCCTCGC
GCACCGACGCTCCCCTCGATATTGCCGTCATCGGCGCCGGTCTAGGCGGC
CTGAGTGCAGCCGTGGCTTTACGTCGCCAAGGTCATCGAATCACCGTCTA
CGAGCGATATGATTTTGCTGGCGAAGTGGGTGCTTCCTTGAGCGCAGCTT
CCAATGGATCCCGGTTTCTGGAGCAATGGGGTGTCGACGTTAAGGCTGCC
AAACCGGTGGTTTTGAAGAAGCTCATTATGCATGAATGGGAGTCTGGGGC
AATACAGAGCGAATATGGTCTTGGGGACTATAAGGCCAAATTTGGGACGG
AATACAACAACTTCCATCGCATTGACATCCACCAACAATTACTTAAGTCT
GCTTTTGAAGAGCCGGGCGAAGGCACTCCCTGCACATTGAAAGTGAATCA
CAAGGCCGTGTCGCTAGATGCAGAGGCCGGTCGCATAGTGTTCGACAATG
GTGAGACGGCGTCAGCAGACCTCATCATCGCCGCGGATGGCATTCGCTCT
CAAAGCCGCCTTGATATGGGAATCACTCCCGAGTTCACCATGTCAACTTC
ATGCTGCTACCGCTGCATCATTAGCGCCGAGAAGCTCCGCAGCCTCGGGC
TAGACGACTACATCGACAATGAGGCAATAGAATACTGGGGTGGATTTGGG
ATCAACAAAATTGTCATGTCACCCTGCAGTAACGGGGATGTCGTGAGCTG
CTACTGCTTCTATCCGGCGGAGTACAACAATTTGCGTGACGATGGCTGGA
ATATCTCGGCGACTCCGGAGCAGCTGGTCGATACCTTTCCGGGACTGGAT
GAACGCATGAAATTGTTGATGATGAACGCTGAGGACATTAAGATGTGGCG
CTTGTACCGTCACCAACCATACCCCTACTGGGCCAAAGGCAAAGTATGCC
TGCTAGGTGATGCCGCCCATCCGATGATGCCCGATCAGTCGCAGGGTTCG
TGTATGGCCTTCGAGGACGCCGGCGCGCTGGGATTGATCTTCCACCGCAC
GTTCCGGGAAGAGTACAGTGTCGCAGAGGGCCTACAGCTATACGAGCGGC
TACGGAAGCCACGAGCCACGAAGATACAAGAGGCCAGTTTTCGTGCACGC
GAGGACCTCAGCGAGCGCATTGGATGGAGCTCGTCCACGGATCGGCCGGG
GAAGTTGACCATCGAAGAGGTATGTGGGTACAATATGCGAAAACATCTGG
AAGAATTGAAAGCCCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | PFAM:PF07992 |
| DBxref | PFAM:PF13450 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:466260..467668 + |
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