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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:524691..525838- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007954-T1 ID=KJC3_007954-T1|Name=KJC3_007954-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1148bp|location=Sequence derived from alignment at ch6:524691..525838- (Aspergillus niger KJC3)
CTATTTATACCATTGACCCCTGGCCCAATTAAATCATCAGTAACCATCAC
ATCAAAACAACAACTTACAATGGCGACAATCCTCTACAACCAACTCTTCG
TCACTCCCTCTCTCCCCCCCGCCCCCTTCCCCTTCCACAACCGTACCGTC
ATCATAACGGGCGCCAACACCGGTCTCGGCCTAGCAGCAGCCCATCACAT
CGCCTCCGGCCCCATCGGCAAGCTCATCCTCGCCGTCCGCAACCTTTCCG
CCGGCGAGTCCGCCCGTGCCGAGATCCTCAATGCCCAGCCCGATTGCGAC
CCTCAAACCGTCGAGGTCTGGCCCTTAGATCTGGCCTCCTACGACTCCGT
CCGCGCCTTCGCTACCCGCGCAACCACTACGCTCGACCGTCTCGATGTTC
TTCTCTGCAACGCGGGTCTCGCGACGTTTCAGTGCTCCAAGGCAGAGGGC
CACGAGCGCATGATCACGGTCAATGTGATTTCGACGTTCTTGTTGGCTGT
GCTACTGGTGCCGAAGTTGAGGGAGACGAGGAGGCTGTGTCAACAGATGG
GGGAAGAAGGGCACATCCCTGTGTTGTCGATAGTAGCAAGTGAAGTCCAT
GCATTTACCAAGTTTCCCGAGAGGAATGCGCCCGCAGAGAAAGGGGTGGG
TGTGTTTGAGGCGCTGGATGAGCCGGAACGGTACTATAAAACGATGGCAG
AGCGGTACCGCACGTCAAAGTTATTGGATGTGCTATTAACGAGGGAGTTG
GCGGATCGAATTGGGGATGATGATATTGTGGTCAATTGTCTGAATCCGGG
GCTTTGTCGGTCGCAATTAGCCAGGGAGATGGATAATGTGGTGGTTAGGA
TTATGTTGCGGTTGTTGGGGAGGACGGCGGAAGTGGGGAGCAGGACGTTG
GTGACGGCTGCGGCGGCGGGGAGGGAAAGTCATGGCCAGTATATGTCGAA
TGGAGTGGTGTGTCCGCGGGAATTATCGTCATTTGTGACGAGTGAGGAGG
GGAGGAGGACGCAGAAGAGAGTATGGGAGGAGTTGAGTGATATTTTGGAG
CAGATTCAGCCGGGGATTATGCGGGGGGTGGTGTAATTGTGTGTTTGATT
AGGACTGGTTTGTTTGTATACTAATGGTGACCAATTCCACTTAATGCT back to topCoding sequence (CDS) from alignment at ch6:524691..525838- >KJC3_007954-T1 ID=KJC3_007954-T1|Name=KJC3_007954-T1|organism=Aspergillus niger KJC3|type=CDS|length=1017bp|location=Sequence derived from alignment at ch6:524691..525838- (Aspergillus niger KJC3)
ATGGCGACAATCCTCTACAACCAACTCTTCGTCACTCCCTCTCTCCCCCC
CGCCCCCTTCCCCTTCCACAACCGTACCGTCATCATAACGGGCGCCAACA
CCGGTCTCGGCCTAGCAGCAGCCCATCACATCGCCTCCGGCCCCATCGGC
AAGCTCATCCTCGCCGTCCGCAACCTTTCCGCCGGCGAGTCCGCCCGTGC
CGAGATCCTCAATGCCCAGCCCGATTGCGACCCTCAAACCGTCGAGGTCT
GGCCCTTAGATCTGGCCTCCTACGACTCCGTCCGCGCCTTCGCTACCCGC
GCAACCACTACGCTCGACCGTCTCGATGTTCTTCTCTGCAACGCGGGTCT
CGCGACGTTTCAGTGCTCCAAGGCAGAGGGCCACGAGCGCATGATCACGG
TCAATGTGATTTCGACGTTCTTGTTGGCTGTGCTACTGGTGCCGAAGTTG
AGGGAGACGAGGAGGCTGTGTCAACAGATGGGGGAAGAAGGGCACATCCC
TGTGTTGTCGATAGTAGCAAGTGAAGTCCATGCATTTACCAAGTTTCCCG
AGAGGAATGCGCCCGCAGAGAAAGGGGTGGGTGTGTTTGAGGCGCTGGAT
GAGCCGGAACGGTACTATAAAACGATGGCAGAGCGGTACCGCACGTCAAA
GTTATTGGATGTGCTATTAACGAGGGAGTTGGCGGATCGAATTGGGGATG
ATGATATTGTGGTCAATTGTCTGAATCCGGGGCTTTGTCGGTCGCAATTA
GCCAGGGAGATGGATAATGTGGTGGTTAGGATTATGTTGCGGTTGTTGGG
GAGGACGGCGGAAGTGGGGAGCAGGACGTTGGTGACGGCTGCGGCGGCGG
GGAGGGAAAGTCATGGCCAGTATATGTCGAATGGAGTGGTGTGTCCGCGG
GAATTATCGTCATTTGTGACGAGTGAGGAGGGGAGGAGGACGCAGAAGAG
AGTATGGGAGGAGTTGAGTGATATTTTGGAGCAGATTCAGCCGGGGATTA
TGCGGGGGGTGGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007954-T1.utr3p1 | KJC3_007954-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007954-T1.utr5p1 | KJC3_007954-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:524691..525838 - |
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