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KJC3_007967-T1, KJC3_007967-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007967-T1
Unique NameKJC3_007967-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:556723..558326-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007967-T1 ID=KJC3_007967-T1|Name=KJC3_007967-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1604bp|location=Sequence derived from alignment at ch6:556723..558326- (Aspergillus niger KJC3)
GCCATCTCCTCCATCTCCATTGACCCTTATTCTTCTTCTGAATATCGTCA
TCAAAATGACTGACCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCA
TCCATCTCCTACAATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAG
CACATCTGACGAGGAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATG
ACCCCTTCCAACTAGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAG
ATGCAACCCCAAGCCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCT
CCCGCACAACGCCAACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCA
AACAACTTCAAACGTTCTACGAATCCCAGAATGAGAACATCCAACGCATG
CTCAAGCCCGTCGAAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAG
CAACCAACTCAAGTACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATG
TCATCCTCTGCGTTCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTG
TCCTTGTACACAACCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATAT
CACTCTCCTCGTCTCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAAT
TCCCCGCCGGAAAAGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGT
TTTCTCATGACGGCTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGA
ACTCGCCGAAGGATCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCG
TTGTCGCCGTCATCGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTAC
TGCTTCGCGCTGAAGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGA
CCACCGCAATGACCTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAG
GTGGAGGTAAACTGCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTC
TCCGTGCTTGTCAGTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCA
GTTGCTTATCGGTGTTACGGCCGATACGAAGATGCAACAGTTGATTACAT
ATATCTGTGAGCTTATCCCCCTCTCTTATCTCCTTTCCACTCCCGCCTAT
AGATGAAAGATAAAAGCTAATAACGTGTTAATCGTAAAGCAATGACCCAC
TCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATACACCTCCGGTCC
TCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGAACGATTCGCTGC
GGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAGTTGGAGTCTTTG
CCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGAGACCACGCATAA
GCCGGAGCACTTCTTGAAGAAGGAGTTGTAGGTTTATGTGTTGGTTGGTA
TGTCTATTCGTTCGGGTTGGGTGGGATATGGTATATATCAATATTGTATT
GGGATGGGATATGGATATGGTATCGAACTCGGTAGATAATCTATTATAGA
GAGTAGTATAGCTTTAAGTCTCAAATACAGGAATAGAATATACACTTCAA
ATAA
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Coding sequence (CDS) from alignment at ch6:556723..558326-

>KJC3_007967-T1 ID=KJC3_007967-T1|Name=KJC3_007967-T1|organism=Aspergillus niger KJC3|type=CDS|length=2586bp|location=Sequence derived from alignment at ch6:556723..558326- (Aspergillus niger KJC3)
CAATGACCCACTCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATAC
ACCTCCGGTCCTCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGAA
CGATTCGCTGCGGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAGT
TGGAGTCTTTGCCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGAG
ACCACGCATAAGCCGGAGCACTTCTTGAAGAAGGAGTTGTAGATGACTGA
CCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCATCCATCTCCTACA
ATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAGCACATCTGACGAG
GAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATGACCCCTTCCAACT
AGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCAACCCCAAG
CCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGCACAACGCC
AACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAACTTCAAAC
GTTCTACGAATCCCAGAATGAGAACATCCAACGCATGCTCAAGCCCGTCG
AAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAGCAACCAACTCAAG
TACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATCCTCTGCGT
TCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTTGTACACAA
CCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATATCACTCTCCTCGTC
TCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCCGCCGGAAA
AGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCTCATGACGG
CTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCGCCGAAGGA
TCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTCGCCGTCAT
CGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTTCGCGCTGA
AGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGACCACCGCAATGAC
CTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAGGTGGAGGTAAACT
GCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGTGCTTGTCA
GTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGCTTATCGGT
GTTACGGCCGATACGAAGATGCAACAGTTGATTACATATATCTCAATGAC
CCACTCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATACACCTCCG
GTCCTCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGAACGATTCG
CTGCGGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAGTTGGAGTC
TTTGCCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGAGACCACGC
ATAAGCCGGAGCACTTCTTGAAGAAGGAGTTGTAGATGACTGACCCTCCT
CAGACTATCCCTCTTCACCACCTTCCCTCATCCATCTCCTACAATGCCGC
CACCACCACAGCCCTGGAATCTCACCTCAGCACATCTGACGAGGAGTCTA
GCCCGCCTCCGCGTTACACCCGCGAGAATGACCCCTTCCAACTAGCCTCG
AAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCAACCCCAAGCCAACAT
CTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGCACAACGCCAACCCCC
GCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAACTTCAAACGTTCTAC
GAATCCCAGAATGAGAACATCCAACGCATGCTCAAGCCCGTCGAAGAACA
CGTCCGCGATGCCCGTGAAACAAACAGCAGCAACCAACTCAAGTACAAAA
TCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATCCTCTGCGTTCTTCAA
CTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTTGTACACAACCATGGC
CGACGCCGTCTTTGATCCTCTCTCCAATATCACTCTCCTCGTCTCCAACA
AGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCCGCCGGAAAAGCTCGT
ATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCTCATGACGGCTGTCTC
TTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCGCCGAAGGATCCAACT
CCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTCGCCGTCATCGTCGCC
TTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTTCGCGCTGAAGGATCA
GTATTCCCAGGTCATGATCCTTTGGGAAGACCACCGCAATGACCTCCTTA
TCAACGGATTCGGTATCCTTACCAGCGTAGGTGGAGGTAAACTGCGCTGG
TGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGTGCTTGTCAGTTGTTT
GTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGCTTATCGGTGTTACGG
CCGATACGAAGATGCAACAGTTGATTACATATATCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006812cation transport
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007967KJC3_007967Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007967-T1KJC3_007967-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007967-T1.cdsKJC3_007967-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007967-T1.utr3p1KJC3_007967-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007967-T1.exon2KJC3_007967-T1.exon2Aspergillus niger KJC3exon
KJC3_007967-T1.exon1KJC3_007967-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007967-T1.utr5p1KJC3_007967-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027470
DBxrefInterPro:IPR036837
DBxrefInterPro:IPR027469
DBxrefInterPro:IPR002524
DBxrefPFAM:PF16916
DBxrefPFAM:PF01545
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:556723..558326 -
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