|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:704938..705956+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008022-T1 ID=KJC3_008022-T1|Name=KJC3_008022-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1019bp|location=Sequence derived from alignment at ch6:704938..705956+ (Aspergillus niger KJC3)
CATCAATGGATTATATGTGCCATATTTTATTTCATCCATCTATTCAAGTT
GACTTCATCGATCGTTGACAATATGAGTCTCAACTACAAAGTCTTCAGCA
GCACACGTCCCGGCGTGAACCGGTCCACACCAGCCGGTCGCGATCATCTC
AAGTGGGTGCCGACCACTTCGACCTTAATATTTGGTCAAAGGGACGCAGT
GCTGGTCGATACCCAGTTAACCAAGGCTGCTGCGAAGGACTTGGTGGACT
GGGTGGTAGGTACGGGAAAAAACCTCACGACTATTTATATCTCCCATGCC
CACGGCGATCATTTCTATGGCACCGGTGCCCTCCTCGAGAAATTTCCAGA
GGCAAAAGTCTTGGCTACGCGCGAGACTGTTTCTCGGATGGTCGAAGCCA
TAAACCCAGAAGGCATGGACGGCTTTTGGAGAAAGCTCTTTCCTGGGGAG
ATCCCAGAAAAGCTCGTGATGGCTACACCTCTTGAGAAAGACCACATCAT
GTTGGAAAACGAGCGATTGGAAGTAGTTAGACTGGGCCATACAGACACCG
ATGATACAACGGCTCTCTGGGTGCCTACAATTGGCTTGGTAGTCGCGGGA
GACGCGGTCTACAACAACACGCACCCGTTCCTTGGAGAATCAAAGTCCCA
GGAGGCCAGATCGCGATGGGTGGCAGCGCTCGACAAGATCTTGACCCTTG
GACCAAAAATTGTGGTTGGTGGTCATAGTGATCCAACCAAGGGATATTCT
CCCGATGCCGTCCAAGCGACCAAGGATTACCTGGATGACTTCACGCGACT
GGATGGACAAACGTCCTCTCCTGAGGAATTGTATTCCCGAATATTGGAAC
TGCATCCTACTCGATTGAATGTCGGCTCGCTATGGGGAGGTGCAATGGTT
GTGAAGAAATAGCTCTATATATGGCCTCAATGTTGACTGAGTAACTAATG
GTTGGTTCACTCCGCCATGATTTACTATGAGCTCAATATAACCGGAACGT
ATTCCTATATATTCCTGAT back to topCoding sequence (CDS) from alignment at ch6:704938..705956+ >KJC3_008022-T1 ID=KJC3_008022-T1|Name=KJC3_008022-T1|organism=Aspergillus niger KJC3|type=CDS|length=840bp|location=Sequence derived from alignment at ch6:704938..705956+ (Aspergillus niger KJC3)
ATGAGTCTCAACTACAAAGTCTTCAGCAGCACACGTCCCGGCGTGAACCG
GTCCACACCAGCCGGTCGCGATCATCTCAAGTGGGTGCCGACCACTTCGA
CCTTAATATTTGGTCAAAGGGACGCAGTGCTGGTCGATACCCAGTTAACC
AAGGCTGCTGCGAAGGACTTGGTGGACTGGGTGGTAGGTACGGGAAAAAA
CCTCACGACTATTTATATCTCCCATGCCCACGGCGATCATTTCTATGGCA
CCGGTGCCCTCCTCGAGAAATTTCCAGAGGCAAAAGTCTTGGCTACGCGC
GAGACTGTTTCTCGGATGGTCGAAGCCATAAACCCAGAAGGCATGGACGG
CTTTTGGAGAAAGCTCTTTCCTGGGGAGATCCCAGAAAAGCTCGTGATGG
CTACACCTCTTGAGAAAGACCACATCATGTTGGAAAACGAGCGATTGGAA
GTAGTTAGACTGGGCCATACAGACACCGATGATACAACGGCTCTCTGGGT
GCCTACAATTGGCTTGGTAGTCGCGGGAGACGCGGTCTACAACAACACGC
ACCCGTTCCTTGGAGAATCAAAGTCCCAGGAGGCCAGATCGCGATGGGTG
GCAGCGCTCGACAAGATCTTGACCCTTGGACCAAAAATTGTGGTTGGTGG
TCATAGTGATCCAACCAAGGGATATTCTCCCGATGCCGTCCAAGCGACCA
AGGATTACCTGGATGACTTCACGCGACTGGATGGACAAACGTCCTCTCCT
GAGGAATTGTATTCCCGAATATTGGAACTGCATCCTACTCGATTGAATGT
CGGCTCGCTATGGGGAGGTGCAATGGTTGTGAAGAAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008022-T1.utr5p1 | KJC3_008022-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008022-T1.utr3p1 | KJC3_008022-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036866 |
| DBxref | InterPro:IPR001279 |
| DBxref | PFAM:PF00753 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:704938..705956 + |
|
