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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:734075..736258+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008029-T1 ID=KJC3_008029-T1|Name=KJC3_008029-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2184bp|location=Sequence derived from alignment at ch6:734075..736258+ (Aspergillus niger KJC3)
CTTGTAAGGATAGCTCATTATTCACCTTAATATCCTTACAAGTAACCCAC
CATGCTAGGCGCAGCAGCATCCCGGCGCGCTGTTGCCATTCCCAGGACCC
TTGCACATCGCCATCATCAACATGCATTCTCATTCTCGACACGCTCAATA
CCCTCCATCCTCCGTTCACGACCGACTGGTGCTCCCACATCCCTCCTACG
AAGCGTTCAACCCACCACCATCCAGACTCGTCCCATCTCCTTCGCGCAGA
GGATGAAGCGCGGGTACCAGGAAGCCTCCCGTGGCATTTGGCGCAATAAC
CCCATCCTCCTTCCCCTCGCCCTGCTCTCCGTCGCCACCGCAACTGCAAT
CTTTAGCTACATCGCCTACAAGGAAGCCACTGAAGTCGGCCCGCAATACC
ACAAGTTCCCGCCACCGGTCGCGGAACGTCTCCGTACGGCAATCTACTAT
ACCGATGTAAAGCTGAACCCCGTTAAAGCCATTGACGCATACAGCGAGGC
AATCAAGTTAGCAACGGAACTGCACATGCACCCCTACTCGGACGAAGTGA
TGGGGATCAGGTTGCAGGTGTCGAAGTGTCTGGAGATGGCGGGGCTAGTG
CCGGCTGCTATTCAAGTCCTAGAGAAGACACGAGCGGATGCATATCACTG
GGTGAGGACAAGGATGGAAACAGAGGCTTTCAAAAATGGTGAAAGCGACT
ATTTCTTCGCCCGCGGGCCCTCCGCGGAGAAAGGCGAACTGGCCGCTGGT
CCAATGAAAGTCGATCCCGCCATTGCAGAAACATATGAGAAGATGAAAGA
GGCGGAAATCTATGAATATGGACAGGTGGAGAAAACGCTCGCCAAGGTTG
TGGGTATGTCCATAAAGCTTGCGGAACTATATAAGAGCGATTATATCCAG
GATGACCAAAAGGCCGAAGAGGCCCTCGAATTTGCCGTTCAACTATCCCT
CGGCGAAGTGCAACGTCGACACCAAGCCAAACTCCCCATCGGCGGTGGCA
ACTGGATGACTCTTACGGAGATCGGAACCGCTCTATCCGAGTTGGGCCAA
CACTATGCCTCCCAGGGGAAGTTGGACCTTTCATTGCCGTTGTATCTGCG
CGCCTTTGACCTCATTAATGCCAACGAAGGTGGAACGCCGTCCTGCAAGC
AGGTCACCCTCATGTACAATATCAGTGCTTGTATCGGCAACCCAGCTTTA
GATGGTGTCTCGCCATCGTCGGACCCGGGTGTTTCGCGTGCTGAGGCTAT
CGAGGCGACACGCAAGTGGGCTCAGGGCGCGATTGAGAGGGCTGCGAAGG
TCGAACCCTCCGAAGAATCTGTGGAGTGCGATTACAGCTGTGCGGCGGCC
AAGGTTATGTTGGGACAATTGGCGGTGTTTCATAATAAACCAGAGGAGGC
ACTGAAGTATTATTATGAGGGCAAGGATATTTACGACCGCATAGAAGCCC
TTTCCGATGCGGAGGATGTCTCAAGGCTTATTAAGGATCTTGAAAAGAAG
AAGAAATGATTGAATTTGGTGGATGCGGATCAGATTTATGAGGTTTGTGT
TGACGAGGCTGATCAAGACCAACGTCCACCAGCACGCGGGTGCAATGTCA
CTGCCCTTCTCGTGGGGAATCGAATTCTGGTCGTCAACCCTCATCCAAGT
CTACGAGACAACACAACAGTGAGTCAGCGTCTGAATGTTTCCATTCAATT
CATCACGTTCGTTTTAACCTGATCGAGCCCGCTAAGTTAGGTGCAGGTGC
TTCGTTGTCTTGAAGCAAGAATTCCGTGAAGGGCTGTGATGAGATGGCCC
AGAGGCTGTCCTATCCTCTTTCCTCTGACATCACGGATCTTTCTTCTGGC
GCACGTCTCAATTTATCAGTCAGCCCCCGTAGCCTTCACTAGCGATGTAT
TCTACTACCCTTATCTCATCACCTGTACGGTATATATTGGCGGAGAAATC
ATTTGATTACGTCCAGAAATCCTCTCGTGTTCTGCACGACCTCCCTATAG
TTTTCTCATCCCAGCCCAGTGTTTTTTTTGGGTCGCCGTCCCCGGCAATA
CCTGTCTCTGTTTGTTAGCGGTCCCTTAGCACCAGTAGATAGTGTGTCGA
TGCGCACTCCTGCATCGTCGTAATATCATATTGAGCCACTACCAGTTAAG
CGATCAAAGGAACGGTGAACCGGATACCACATCC back to topCoding sequence (CDS) from alignment at ch6:734075..736258+ >KJC3_008029-T1 ID=KJC3_008029-T1|Name=KJC3_008029-T1|organism=Aspergillus niger KJC3|type=CDS|length=1458bp|location=Sequence derived from alignment at ch6:734075..736258+ (Aspergillus niger KJC3)
ATGCTAGGCGCAGCAGCATCCCGGCGCGCTGTTGCCATTCCCAGGACCCT
TGCACATCGCCATCATCAACATGCATTCTCATTCTCGACACGCTCAATAC
CCTCCATCCTCCGTTCACGACCGACTGGTGCTCCCACATCCCTCCTACGA
AGCGTTCAACCCACCACCATCCAGACTCGTCCCATCTCCTTCGCGCAGAG
GATGAAGCGCGGGTACCAGGAAGCCTCCCGTGGCATTTGGCGCAATAACC
CCATCCTCCTTCCCCTCGCCCTGCTCTCCGTCGCCACCGCAACTGCAATC
TTTAGCTACATCGCCTACAAGGAAGCCACTGAAGTCGGCCCGCAATACCA
CAAGTTCCCGCCACCGGTCGCGGAACGTCTCCGTACGGCAATCTACTATA
CCGATGTAAAGCTGAACCCCGTTAAAGCCATTGACGCATACAGCGAGGCA
ATCAAGTTAGCAACGGAACTGCACATGCACCCCTACTCGGACGAAGTGAT
GGGGATCAGGTTGCAGGTGTCGAAGTGTCTGGAGATGGCGGGGCTAGTGC
CGGCTGCTATTCAAGTCCTAGAGAAGACACGAGCGGATGCATATCACTGG
GTGAGGACAAGGATGGAAACAGAGGCTTTCAAAAATGGTGAAAGCGACTA
TTTCTTCGCCCGCGGGCCCTCCGCGGAGAAAGGCGAACTGGCCGCTGGTC
CAATGAAAGTCGATCCCGCCATTGCAGAAACATATGAGAAGATGAAAGAG
GCGGAAATCTATGAATATGGACAGGTGGAGAAAACGCTCGCCAAGGTTGT
GGGTATGTCCATAAAGCTTGCGGAACTATATAAGAGCGATTATATCCAGG
ATGACCAAAAGGCCGAAGAGGCCCTCGAATTTGCCGTTCAACTATCCCTC
GGCGAAGTGCAACGTCGACACCAAGCCAAACTCCCCATCGGCGGTGGCAA
CTGGATGACTCTTACGGAGATCGGAACCGCTCTATCCGAGTTGGGCCAAC
ACTATGCCTCCCAGGGGAAGTTGGACCTTTCATTGCCGTTGTATCTGCGC
GCCTTTGACCTCATTAATGCCAACGAAGGTGGAACGCCGTCCTGCAAGCA
GGTCACCCTCATGTACAATATCAGTGCTTGTATCGGCAACCCAGCTTTAG
ATGGTGTCTCGCCATCGTCGGACCCGGGTGTTTCGCGTGCTGAGGCTATC
GAGGCGACACGCAAGTGGGCTCAGGGCGCGATTGAGAGGGCTGCGAAGGT
CGAACCCTCCGAAGAATCTGTGGAGTGCGATTACAGCTGTGCGGCGGCCA
AGGTTATGTTGGGACAATTGGCGGTGTTTCATAATAAACCAGAGGAGGCA
CTGAAGTATTATTATGAGGGCAAGGATATTTACGACCGCATAGAAGCCCT
TTCCGATGCGGAGGATGTCTCAAGGCTTATTAAGGATCTTGAAAAGAAGA
AGAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008029-T1.utr5p1 | KJC3_008029-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.6 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:734075..736258 + |
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