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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:747827..749673+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008032-T3 ID=KJC3_008032-T3|Name=KJC3_008032-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1847bp|location=Sequence derived from alignment at ch6:747827..749673+ (Aspergillus niger KJC3)
CCCAAAACTCGTGAAACAACCGAGGATTCCATTCCCGGGAATACTTGGTT
CCGGTGGTAGCCACACCGTCAATTGCCGTGAAGATAAGCGATTACAAAGT
ACATAAGCCAAGCCTGGCTGCAGTGATTGTTTCTGGAATTTGGGCTCAAC
CATTTACGCTCACCTCCTACTCTACACAACATTATCTTACTTGAATTATA
AGACTCTTCATCTTATACACTATCATTAGACTCAGACTCATATAATCACT
CGGAAACAAGCAAACATGTACTCCAAATTCTGGCCCAAGGGCGGCCTCCC
GGGAATTCTGCACCACTTCGTATGTCCAATTCTGACCTGTCCGACTCCCA
GCCGACCAGACTAACACAATATTTCCCAAATTTTAGACAGAAACCCTCGT
AACCTTCGAATACACAACCACTACCCCCTCTCTCTCCCAACCTCACACCC
TGCTCTTCGTCGGCGGCCTCGGCGATGGCCTCGCCACAACATCCTACATG
GCAGACCTAGCCCGTGCCCTCCACTCCACCCCCTGGTCCCTCTTCACCCT
GAACCTTACCTCCTCCTACCAGTCCTGGGGCCTGGGACATCTGGACCGCG
ATACCGACGAAATTGCCCAATGCATCCGCTACATCAAAGACTACAAAGCG
GATAAATACGGTTCTGCCTCTGCAGCTGGCAGCAAGATCGTCTTGATGGG
ACACTCCACTGGCAGCCAATGTGTCATGCATTACCTAACGCGGCCAAACC
CGCATACCACAAAACCGCCCTTTGATAAATACTTAGAGCATGTGGAGCGG
TTGCCGCTGGATGGTGCTATAATGCAAGCACCTGTGTCGGATCGCGAGGC
GATATTGTGGGTCTTAGAGAATGGATTTGGAGGCAGATCTTCTGCGGAGT
GTAAAGCTGTTTATGAAAAGCTAGTGGGCATGGCAAGAGAGGCAGAGGAG
AAGAGAATCAGGGAGGGTGGCGAATTCGATGTGATTCTGCCGATTGAGTT
GACTAGTTTTGCTTATCCGGCTAATACACCGTTGTCGGCGAGGCGGTTGT
TGAGTTTAGTGAGTCCAGATGCTCCGGGTAACCCTGGGGAGGACGATATG
TTCAGTTCGGACTTGGGGCCGGAGCAGTTGGAGAAGACCTTCGGAAAGGT
GAAGAGCGGAGGCTTGTTGGCAGGAAAGGCGAAGTTGATGGTGCTATACT
CGGGTAAGGATCAGAGTGTCCCTGACTGGGTGGATAAGGAGGCACTGTTG
AGGAAATGGCGGGGGATTGCAAACGCTGGATGTGCAAAGGGCGAAGAGGT
CTGGGATGATGAACATACTGCAGTCATTCCGGGCGCGTCGCATGCCCTCA
GTAATGATGATCAGGCGGAGCCAAGACGGTTCCTTGTGGACAAGGTCATG
GGGTATCTGAAAACTGTGGTTAACGTGTAATACACCTTTTTCTTTCTTCG
TGTACGATGATAAGTGTTGGATTTTCTGACCTTCTGAAGTGGTACGCCTG
ATGAGCCTTGTGCTTTGTCGGAGAAACAGCAGATCCACGAGACATGGAAT
GCTGCCAGTCAGCTTGAGACTGGGTCTAGGTATTCTACGCAAGACTCGAC
GGGCCTGCGGGCACGACGGGACTGGGTGAAATATGGCCTGGTAGCAACAG
TCTTGGTGCTTGCCTCACCTTATGTCTATCCACACTGCGGGGGCAATTAG
TGTGATGATGGTTTGAGTAGGTTATGGACAGGACCCCTCCTTTACGGTGA
ACGACTATGTTTATGCATGTATGATGTTGGATAGCAATGCAGATATCAAG
ATACAATTCAAGTGCTCGCGCAGACACTGCGAGATGTTCATTCTCTA back to topCoding sequence (CDS) from alignment at ch6:747827..749673+ >KJC3_008032-T3 ID=KJC3_008032-T3|Name=KJC3_008032-T3|organism=Aspergillus niger KJC3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch6:747827..749673+ (Aspergillus niger KJC3)
ATGTACTCCAAATTCTGGCCCAAGGGCGGCCTCCCGGGAATTCTGCACCA
CTTCACAGAAACCCTCGTAACCTTCGAATACACAACCACTACCCCCTCTC
TCTCCCAACCTCACACCCTGCTCTTCGTCGGCGGCCTCGGCGATGGCCTC
GCCACAACATCCTACATGGCAGACCTAGCCCGTGCCCTCCACTCCACCCC
CTGGTCCCTCTTCACCCTGAACCTTACCTCCTCCTACCAGTCCTGGGGCC
TGGGACATCTGGACCGCGATACCGACGAAATTGCCCAATGCATCCGCTAC
ATCAAAGACTACAAAGCGGATAAATACGGTTCTGCCTCTGCAGCTGGCAG
CAAGATCGTCTTGATGGGACACTCCACTGGCAGCCAATGTGTCATGCATT
ACCTAACGCGGCCAAACCCGCATACCACAAAACCGCCCTTTGATAAATAC
TTAGAGCATGTGGAGCGGTTGCCGCTGGATGGTGCTATAATGCAAGCACC
TGTGTCGGATCGCGAGGCGATATTGTGGGTCTTAGAGAATGGATTTGGAG
GCAGATCTTCTGCGGAGTGTAAAGCTGTTTATGAAAAGCTAGTGGGCATG
GCAAGAGAGGCAGAGGAGAAGAGAATCAGGGAGGGTGGCGAATTCGATGT
GATTCTGCCGATTGAGTTGACTAGTTTTGCTTATCCGGCTAATACACCGT
TGTCGGCGAGGCGGTTGTTGAGTTTAGTGAGTCCAGATGCTCCGGGTAAC
CCTGGGGAGGACGATATGTTCAGTTCGGACTTGGGGCCGGAGCAGTTGGA
GAAGACCTTCGGAAAGGTGAAGAGCGGAGGCTTGTTGGCAGGAAAGGCGA
AGTTGATGGTGCTATACTCGGGTAAGGATCAGAGTGTCCCTGACTGGGTG
GATAAGGAGGCACTGTTGAGGAAATGGCGGGGGATTGCAAACGCTGGATG
TGCAAAGGGCGAAGAGGTCTGGGATGATGAACATACTGCAGTCATTCCGG
GCGCGTCGCATGCCCTCAGTAATGATGATCAGGCGGAGCCAAGACGGTTC
CTTGTGGACAAGGTCATGGGGTATCTGAAAACTGTGGTTAACGTGTAAAT
GTACTCCAAATTCTGGCCCAAGGGCGGCCTCCCGGGAATTCTGCACCACT
TCACAGAAACCCTCGTAACCTTCGAATACACAACCACTACCCCCTCTCTC
TCCCAACCTCACACCCTGCTCTTCGTCGGCGGCCTCGGCGATGGCCTCGC
CACAACATCCTACATGGCAGACCTAGCCCGTGCCCTCCACTCCACCCCCT
GGTCCCTCTTCACCCTGAACCTTACCTCCTCCTACCAGTCCTGGGGCCTG
GGACATCTGGACCGCGATACCGACGAAATTGCCCAATGCATCCGCTACAT
CAAAGACTACAAAGCGGATAAATACGGTTCTGCCTCTGCAGCTGGCAGCA
AGATCGTCTTGATGGGACACTCCACTGGCAGCCAATGTGTCATGCATTAC
CTAACGCGGCCAAACCCGCATACCACAAAACCGCCCTTTGATAAATACTT
AGAGCATGTGGAGCGGTTGCCGCTGGATGGTGCTATAATGCAAGCACCTG
TGTCGGATCGCGAGGCGATATTGTGGGTCTTAGAGAATGGATTTGGAGGC
AGATCTTCTGCGGAGTGTAAAGCTGTTTATGAAAAGCTAGTGGGCATGGC
AAGAGAGGCAGAGGAGAAGAGAATCAGGGAGGGTGGCGAATTCGATGTGA
TTCTGCCGATTGAGTTGACTAGTTTTGCTTATCCGGCTAATACACCGTTG
TCGGCGAGGCGGTTGTTGAGTTTAGTGAGTCCAGATGCTCCGGGTAACCC
TGGGGAGGACGATATGTTCAGTTCGGACTTGGGGCCGGAGCAGTTGGAGA
AGACCTTCGGAAAGGTGAAGAGCGGAGGCTTGTTGGCAGGAAAGGCGAAG
TTGATGGTGCTATACTCGGGTAAGGATCAGAGTGTCCCTGACTGGGTGGA
TAAGGAGGCACTGTTGAGGAAATGGCGGGGGATTGCAAACGCTGGATGTG
CAAAGGGCGAAGAGGTCTGGGATGATGAACATACTGCAGTCATTCCGGGC
GCGTCGCATGCCCTCAGTAATGATGATCAGGCGGAGCCAAGACGGTTCCT
TGTGGACAAGGTCATGGGGTATCTGAAAACTGTGGTTAACGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008032-T3.utr5p1 | KJC3_008032-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008032-T3.utr3p1 | KJC3_008032-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.6 |
| DBxref | InterPro:IPR013744 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF08538 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:747827..749673 + |
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