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KJC3_008040-T1, KJC3_008040-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008040-T1
Unique NameKJC3_008040-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:763498..766427+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008040-T1 ID=KJC3_008040-T1|Name=KJC3_008040-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2930bp|location=Sequence derived from alignment at ch6:763498..766427+ (Aspergillus niger KJC3)
GTCATACTAGATAGGTATATTGTACCCTATATACGGACCTATACGGGATT
ACTCTATCGCCTGTGGGTCTTATTCCCGGAAGTGTACGTAAAAAATATCG
TCACATGATCTAGAGAGAGATAGGTAGCCTCAGTCTTCTTCCTGGCTCAA
CCGATCATCATTTAAGGTATCTCAAGCTTCTTCGGAACAATGGCCTTCCG
AATACCGATCAGCTTCCCATCACAACACGTTCATCGAACTGGAAGTCACT
CGCACGCCTCTCACGGACTGATCCTGCTTCATGGCATCTGAATGGATCGC
ATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTCCTGAGGGCTTT
TAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGCACCTGCGCT
TCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATTACAGCCCCA
GAAACCCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGAATGCATTCA
GTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAGGTATTTCGC
TTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTAATCGGACGA
ATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCTGGTTCACCG
AAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTGCCTATCCCG
ATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCTGGGTCTGGG
GATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAATAGGATCTC
CAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATGAGGCACACC
ACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTTGGCCTCAGT
AACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGCCACGTTCTC
ACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCATATAGTGTACC
ATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTCCAATGCCATT
TTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAAGAAGGACAA
ATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCAATACCACGA
AAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGCACACGATCGA
AAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTAGACAGCTTAC
TGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCACGGCGGGAA
CTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGGAACCAGGAG
TATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTACAGATATTCC
CAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTCGAAATCTTC
TTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGGAAGACCGAC
TGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTGTCATTTCTAC
CCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAAGCGCGAGGG
CAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGATGCCGAAGGC
CGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGAACCCGACAC
AACTGATGATATCAAACTTACCTTCACCAAGTACGATACCATCTACGACC
TCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCTCAGTCGCTAC
GCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTGACTCAACAGG
ATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAGGGAAAAGAAA
GTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAAGTTCAAGTCT
GCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCGCTACGGCCAT
GGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGGCCTCTGAAT
TCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAGCATCCGGCC
ACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCGGAATGGACG
GATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACCTGATTACGA
AGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAGAAAAAACGA
CGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCGGAGACGCGA
AGAGGTGAGAGTGGGACCTGTAGAGGGATGAGTGCTGCAGCCCCAGTCCC
AGTGAAGTACAGAATACAAGACAACCCTGACATCTGCCTCTTCGACCTCC
AAAGCGCCAATACCGCACACTCTTCTTCGTCGCCACAACCCGCTAAAGAG
ACTAGGCGAACCGTGGGTACTTGCGGGCTTCTAAGCCTAAGTACACGATA
GCAAATAAATGCGGCAGTGAGCAACACACCGACATGGCCCCGACGACTAC
CTCCAATCAGGATTTCTGCATCATCCAATCAGCCATATTGACACACTGGG
GACCGCGGTTGGCGCAGAACATCAAAGTCCCTTTCTGACGTAGGATAAGT
CAGTTGCATTGCCACTAGTGTGGGGAACACCTGGCTAGAGTAGCGGCATC
GTCTTTAATTAGCAAATGTTTCCTGGGATGGAGCATATGCACCAGGCCGC
GTTGCGGACTTCCAGCTTCTTTCTCCATCCCACCGGAAATCCCACTACAA
AATCTTCTGCAACCCCATTACCCCTACGCCTGTATCACATCGTAAATTAT
TCAACAGTAGCCCTCTGTATCCAAAATCCTTGTGCTTCTTTGGTAACATG
TTTTGCGGTTATTTAACCCTCACGATCGAT
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Coding sequence (CDS) from alignment at ch6:763498..766427+

>KJC3_008040-T1 ID=KJC3_008040-T1|Name=KJC3_008040-T1|organism=Aspergillus niger KJC3|type=CDS|length=2040bp|location=Sequence derived from alignment at ch6:763498..766427+ (Aspergillus niger KJC3)
ATGGATCGCATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTCCT
GAGGGCTTTTAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGC
ACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATT
ACAGCCCCAGAAACCCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGA
ATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAG
GTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTA
ATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCT
GGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTG
CCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCT
GGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAA
TAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATG
AGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTT
GGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGC
CACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCATA
TAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTCC
AATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAA
GAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCA
ATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGCA
CACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTAG
ACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCA
CGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGG
AACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTAC
AGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTC
GAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGG
AAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTGT
CATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAA
GCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGAT
GCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGA
ACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATACCA
TCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCTC
AGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTGA
CTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAGG
GAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAAG
TTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCGC
TACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGG
CCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAG
CATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCG
GAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACC
TGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAG
AAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCG
GAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008040KJC3_008040Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008040-T1KJC3_008040-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008040-T1.utr5p1KJC3_008040-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008040-T1.utr5p2KJC3_008040-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008040-T1.exon1KJC3_008040-T1.exon1Aspergillus niger KJC3exon
KJC3_008040-T1.exon2KJC3_008040-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008040-T1.cdsKJC3_008040-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008040-T1.utr3p1KJC3_008040-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.6
NoteBUSCO:EOG09261CM0
NoteSMCOG1122:ATP-dependent RNA helicase
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006935
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:763498..766427 +
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