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KJC3_008052-T1, KJC3_008052-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008052-T1
Unique NameKJC3_008052-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:796535..799011+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008052-T1 ID=KJC3_008052-T1|Name=KJC3_008052-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2477bp|location=Sequence derived from alignment at ch6:796535..799011+ (Aspergillus niger KJC3)
CAATGAGGTGCAGATCGGCTAAGTCTAAGGAGTTCTCCTACAGGTTGGTA
CGGGGTAAGAACGCTCGGATACTGCAAGAGAAAAAAGCAACGCTTTGACC
TTTTTGTTCAATAAGTTGGGGTCTTACTACTGGCTTCCCCCATTCATGCT
GCTTTTATTACAAAATTTGAGTTCACTACCGTGCGCAAGCGCAACATCAA
ACCCCCGACCACTGTCAATAATGACTTTAAGCGTGAGCAAGGAAGTGATA
CTGAAAGTGGGCTTTCGTGAAATAATTTGGGCTCCCAGAGATCGCAGTCC
TTCGCCCAGCATGATGACTATTAACCACCCCCAGAAGTAACTATCAGCCA
TGCTAATAATGTACACACACGGAGCAGGCATGAGGAGCTCAAACTCGTTT
ACTCGATTCATGGACCCACAGGTTTTAGCCGCGACAACAGAACCCTTGGC
ACGAAAGCCGTGGTAAATGGTTCGTCTGCTTCTGCCCGGGTGTTCATGTC
CGGCTTCTACAAGTTGTCTTGGGGGAGGGGGGAGTTACTGGATTCTCTCA
ATAGATGTGACCTTGCATCATTTGTGCAAGTATTTTTAACATCAATCCCC
ATGTGGTGGCTATATCATGGGTAATTTAGTGAGTTATTGCACTTCTAAGG
CCGACATTATTCGTTCCTACAATGGAGGTGGCTGCCCACCTATGTGCCGT
TACTTGTATGCCAGATATGGGCTTGCCAAGGTGACATACTTCGAGGAAAA
GAAGCTGTGGTAGACATTGGTGCGTAAAAGGGATGCCCACCCTCTAGCAT
GAGCCTGTTTCTAGCTGGGTATTGGAGGACACCAATAGGTTCCTTCTCCC
CCATATTAAATCACGTGAGTAGTATGCAGAGGATTCGCTCGCCGGTTATC
GACCCGGCGATAAACGCGCCGACGACTTTCCCGCCTGATAACGCCACCCT
TGACCATTTCGCAGTTCTTATCGTCAAGCTCGTCCTCTCCCAGTCACTCT
TTCACAGAAGAAATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAACG
CGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGC
AATTGCGGAGAATAGTACATACTATGATCACGGTTCCTCTAGTTCGGAGC
TGACACGATATTGAATCCAGGAAAACAATCGCCAGAAAGCCATAGCAATA
CGAGAACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTC
CTCCACCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATC
CTCCGGCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGAT
GGCATCAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTC
CAAGATCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCT
ACAACAAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCG
CACATGACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCA
TCGAGATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGC
GGACACGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGG
AAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAA
ATTTCCGGAGAAATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACT
ACCTCCTGACCAATCGTGAGTATCCCCCTGCACAGGTTTGCGGCATGGTT
TGCCACTGAGCGTTCGCTGACCACGGGCCCAACTGCAGCCGAACTTCAGG
ATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACG
TGGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGAGTACGCCTT
TTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGC
GACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAA
CTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCG
GCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGAC
GACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATT
GGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTT
CTAAATCATCAATGAACATCTTCTTGTACATACAAAGTCGTCGCATTGTC
CTGTCATTCTGCACTTATCCGAGACTCCGAGTGTACGTCGACTCGGTTGC
CAATTCCTGCCTCAGGTAGATACCGCAAAGCGCCAAGCGACCTGGCTCCG
CGTATTCTTACCGAACAGGCCCTCCGTAATCTAAGTACTCTACTAATATT
TGGAGGGTATCATCAATAACTTTCCAC
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Coding sequence (CDS) from alignment at ch6:796535..799011+

>KJC3_008052-T1 ID=KJC3_008052-T1|Name=KJC3_008052-T1|organism=Aspergillus niger KJC3|type=CDS|length=3339bp|location=Sequence derived from alignment at ch6:796535..799011+ (Aspergillus niger KJC3)
ATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAACGCGGGATGAGCAC
GCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATTGCGGAGAA
TAGAAAACAATCGCCAGAAAGCCATAGCAATACGAGAACAACGCGAAGCC
GAACAAGCTCGAGCTCACAATGCTGATCCTTCCTCCACCAAAGGTGTCAA
GCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCGGCGACTCTGCGCG
ATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCATCAAGCCGGCGCGC
AACTTTACCAAATTCGTTGAATACGACTTCTCCAAGATCACCGACACGAA
GGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATG
TTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAA
TGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACC
CTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGT
GCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTC
CGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAG
TCTACTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCG
AACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCAT
AAATCAACGTGGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGA
GTACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGG
AGTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTC
AAGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCG
ACGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGG
GTGGTGGACGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAG
ACGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGA
ACTCGAGTTCTAAATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAAC
GCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAG
CAATTGCGGAGAATAGAAAACAATCGCCAGAAAGCCATAGCAATACGAGA
ACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTCCTCCA
CCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCG
GCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCAT
CAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTCCAAGA
TCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAAC
AAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACAT
GACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAG
ATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACA
CGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATG
GGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTC
CGGAGAAATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACTACCTC
CTGACCAATCCCGAACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCG
CCCGAATCCGCATAAATCAACGTGGAATAACATGATGCTGTATCTACGGT
ATCAGGTGGAAGAGTACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAA
GCCTTGGACGCGGAGTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCG
GGAGGTCAAATTCAAGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAG
TCGATGCATACCGACGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGA
GATGACCTGGGGGGTGGTGGACGACATGTACATCAGTGGGGAAGATCGGT
CGAAGATCCCAAGACGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGA
TGGAAGTCGAAGAACTCGAGTTCTAAATGGTGACGGAGGAACAGTCGGCT
CCGCCACCCGAACGCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCC
GCTAACCCCAGAGCAATTGCGGAGAATAGAAAACAATCGCCAGAAAGCCA
TAGCAATACGAGAACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCT
GATCCTTCCTCCACCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGC
CTCCGATCCTCCGGCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCC
CCCTAGATGGCATCAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATAC
GACTTCTCCAAGATCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGA
TGACCGCTACAACAAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGA
AGCCAGCGCACATGACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAG
AATCTCCATCGAGATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTT
GGATGAGCGGACACGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAA
TCGACTGGAAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGC
AAGGATAAATTTCCGGAGAAATACAGTCTACTTACCAAGACCGAGGCACG
AGAGGACTACCTCCTGACCAATCCCGAACTTCAGGATGAGGAACTCCTCC
CACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATAACATGATG
CTGTATCTACGGTATCAGGTGGAAGAGTACGCCTTTTCCGCCAAGAAATG
GGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGAGAATGAGA
AGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAGACCTTAAG
AAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGAGCGACCGG
TGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGTACATCAGT
GGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCAAGAAATGC
GTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008052KJC3_008052Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008052-T1KJC3_008052-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008052-T1.utr5p1KJC3_008052-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008052-T1.exon1KJC3_008052-T1.exon1Aspergillus niger KJC3exon
KJC3_008052-T1.exon2KJC3_008052-T1.exon2Aspergillus niger KJC3exon
KJC3_008052-T1.exon3KJC3_008052-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008052-T1.cdsKJC3_008052-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008052-T1.utr3p1KJC3_008052-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092641G3
DBxrefInterPro:IPR009061
DBxrefInterPro:IPR037129
DBxrefInterPro:IPR000465
DBxrefInterPro:IPR022656
DBxrefPFAM:PF05181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:796535..799011 +
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