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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:809672..810555+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008056-T1 ID=KJC3_008056-T1|Name=KJC3_008056-T1|organism=Aspergillus niger KJC3|type=mRNA|length=884bp|location=Sequence derived from alignment at ch6:809672..810555+ (Aspergillus niger KJC3)
AAAAGTTATGTATACCTGGCATTTCGCCCTTGGAGGAGTGTTCTTAAATA
TGCGCTACTCTGTTCTCTGTGCTATTACTGCTGCTGCTGCATGCGATTGA
GAACCTCACCATTTTCTCATAATCGTGGTTAACTGATATCCTTGAGCCGA
GCACATCCAGCTATCATGTATTCTTTCAAAGTGATCTCCCTATTGAGCAC
GCTGCTCCTAGCCGGAGTTGGTAGTGCCAAGTTGACTACCACTGTACGTC
TTACTCTACTTTACCTGCGCACCCTCAATACAAATATATAAGCATGGAAG
TCGTCTGCTAACAAAGTCACTGCTGTGGATAGATTGGTCTTGAGACAGAT
GAAGGCAGCCATACGGTCCACATCCCGTTCGATGACTGTACTCAAGTTGG
GCAGTTGTAAGTCGCATCACCAACAACATCAATTCGACCTGATGTCCTCG
CGAAGAGAAAGAACGAAAGGGAGAGTCCGTTGACATCTATCTTATCTGTC
ACAGTGAAGTTCGTGGCGTGTTCCTCTCCAAGACATGCCGTCTGTTTACG
TAAGTGTGACTCTTTTTTTCCCCACGATACTTGGGTGTATTTAGTGCATA
TTGAGGGTTCTGAAGGGGGTTCTGAAGATGCTGACTCGAATGTATACTAT
AGTGGAGTAGGCTGCACAGGACGAAACACGCTGCTGCAGCCGGGTGAACA
TACCTCGTCGGAGCCGGTTTATGTTGATAGTGTGCTCTGTTACCCTTGAA
TACAGACTTATTCTCAGCTGAGTTGGTCTGGGGATGTATAATATGGGTCG
GATGAGTGGCTGGGAACTATGAAACACCTTATAATAGTGGGTTGAACATT
GATGATGGGAGGCAAAGTATACGGAATACAATAT back to topCoding sequence (CDS) from alignment at ch6:809672..810555+ >KJC3_008056-T1 ID=KJC3_008056-T1|Name=KJC3_008056-T1|organism=Aspergillus niger KJC3|type=CDS|length=1176bp|location=Sequence derived from alignment at ch6:809672..810555+ (Aspergillus niger KJC3)
ATGTATTCTTTCAAAGTGATCTCCCTATTGAGCACGCTGCTCCTAGCCGG
AGTTGGTAGTGCCAAGTTGACTACCACTATTGGTCTTGAGACAGATGAAG
GCAGCCATACGGTCCACATCCCGTTCGATGACTGTACTCAAGTTGGGCAG
TTTGAAGTTCGTGGCGTGTTCCTCTCCAAGACATGCCGTCTGTTTACTGG
AGTAGGCTGCACAGGACGAAACACGCTGCTGCAGCCGGGTGAACATACCT
CGTCGGAGCCGGTTTATGTTGATAGTGTGCTCTGTTACCCTTGAATGTAT
TCTTTCAAAGTGATCTCCCTATTGAGCACGCTGCTCCTAGCCGGAGTTGG
TAGTGCCAAGTTGACTACCACTATTGGTCTTGAGACAGATGAAGGCAGCC
ATACGGTCCACATCCCGTTCGATGACTGTACTCAAGTTGGGCAGTTTGAA
GTTCGTGGCGTGTTCCTCTCCAAGACATGCCGTCTGTTTACTGGAGTAGG
CTGCACAGGACGAAACACGCTGCTGCAGCCGGGTGAACATACCTCGTCGG
AGCCGGTTTATGTTGATAGTGTGCTCTGTTACCCTTGAATGTATTCTTTC
AAAGTGATCTCCCTATTGAGCACGCTGCTCCTAGCCGGAGTTGGTAGTGC
CAAGTTGACTACCACTATTGGTCTTGAGACAGATGAAGGCAGCCATACGG
TCCACATCCCGTTCGATGACTGTACTCAAGTTGGGCAGTTTGAAGTTCGT
GGCGTGTTCCTCTCCAAGACATGCCGTCTGTTTACTGGAGTAGGCTGCAC
AGGACGAAACACGCTGCTGCAGCCGGGTGAACATACCTCGTCGGAGCCGG
TTTATGTTGATAGTGTGCTCTGTTACCCTTGAATGTATTCTTTCAAAGTG
ATCTCCCTATTGAGCACGCTGCTCCTAGCCGGAGTTGGTAGTGCCAAGTT
GACTACCACTATTGGTCTTGAGACAGATGAAGGCAGCCATACGGTCCACA
TCCCGTTCGATGACTGTACTCAAGTTGGGCAGTTTGAAGTTCGTGGCGTG
TTCCTCTCCAAGACATGCCGTCTGTTTACTGGAGTAGGCTGCACAGGACG
AAACACGCTGCTGCAGCCGGGTGAACATACCTCGTCGGAGCCGGTTTATG
TTGATAGTGTGCTCTGTTACCCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008056-T1.utr5p1 | KJC3_008056-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008056-T1.utr3p1 | KJC3_008056-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:809672..810555 + |
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