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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:973219..974665- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008100-T1 ID=KJC3_008100-T1|Name=KJC3_008100-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1447bp|location=Sequence derived from alignment at ch6:973219..974665- (Aspergillus niger KJC3)
ATGGACTCTGCGAGTCGCCCTGCTTTTGAAGGGCTTCCCGCGGCGATTCC
CAACAATAACAACTATCAAATCACCCCAACTTCCGCTACGTTGGCCCAGT
CTAACACCCAAGACGTAATGGACACCACGATTTCTGACGTGCCGCGTCCG
ACATACCAACAAGAAGGTCAGTGCAACGATGCCGGTGATGTCTGCTAGTG
AAATAACGGAATGCTTCCCAGTCCCTACAGTCGCGAGTCTGTCTGGGGCT
CCAAACGCCTTCTCATCCAATGCTATATCGAGCCAGACAGATTCTTTCCC
TTCACAGCAACCACCACCGAGGTCCAATTTTTCATACTTGAGCAATGGCA
TCATCACCATGCCCCGCTACACACCGAACCAGTACTATGGGGAACCGAGC
AATATCGGTCATCAACTGGATTACATTCCTGGTGGAGGTCGAGGTCGCTC
ATTCGTGTACCCTCATGCACGAACACTCTCACTTTCACAGAACCAACACA
GCGGCCTTCCTGCCTACCCCCAGCGGGACCCGCGCTCAAGCAATACCCAG
CCGACAATGTCCAGGACGACGCCGGGATCAGTGTCTGGCGTTTCACCGGG
CGACGGTTCACCGAATACCCCCGATTTGACCTCATCCACTGCAGTGGTTC
CGCCAGCACTTCGACCTCGAGGTTACGTGCCCCCATCAGCGAGGACACAG
CAAGGAACACAGCACCCGGCCTCTACTACTGCTTCTCCAGTGCCAACGTC
GTCAAGTTATTATCAGCAGTCGCAAGCTCAACAACATTCGCATACGGCTG
GCCCATTCTCTCATCTGCCACCACATCCTGAAGAATTCGACGATGGCGCC
TATATTGCTCCGCTAGTTACGTCGCCCGCCCAGTCATCGTCGGCCAACTT
TGTGACAACTGGCACGCCGCCTTCACGCTCGATGAATGCGGGAAACTCCA
GATATGGGCGCCCCCTTCCGCAACGGCTAGAACTTGCTCGGCGAGCACAT
TTACTTGGCCATCATTACAACCCGCAGGCTGCGCAGGCCATTGTGGAGGC
TCATATGCAGCTGCAGCGCCAACGCCAGCGTCAGCGCCAGGGGCTCGGTA
CCCACCCCACGAAGCCATCCGCAAGTCTTGATAATGCGAAAGACGGCCGC
CCCGAACCAAAGGAGGCGCATGAAATGCGAGTGTCGCTCGAATGCAAGGT
TTGCTTCACCCAACTCGTTGATACGGTACTGCTTCCTTGCGGCCATGCTG
TCCTCTGTCGGTGGTGCGCCGAGATTCAGATCCCCAACAGCATTCTGGAA
CGAGGCTTGCTTGGAGGTCAGCCCCCGTGTGTGATATGCCGAGCGCCTGT
GAAGCAAAAGGTAAAGGCCGATGTTGAAGACTTCCCTGGATCATTGACCA
TCGCTCACACTGACTTGGGGACACAGGTGCGGATTTTTCTTTCTTGA back to topCoding sequence (CDS) from alignment at ch6:973219..974665- >KJC3_008100-T1 ID=KJC3_008100-T1|Name=KJC3_008100-T1|organism=Aspergillus niger KJC3|type=CDS|length=2784bp|location=Sequence derived from alignment at ch6:973219..974665- (Aspergillus niger KJC3)
TCCCTACAGTCGCGAGTCTGTCTGGGGCTCCAAACGCCTTCTCATCCAAT
GCTATATCGAGCCAGACAGATTCTTTCCCTTCACAGCAACCACCACCGAG
GTCCAATTTTTCATACTTGAGCAATGGCATCATCACCATGCCCCGCTACA
CACCGAACCAGTACTATGGGGAACCGAGCAATATCGGTCATCAACTGGAT
TACATTCCTGGTGGAGGTCGAGGTCGCTCATTCGTGTACCCTCATGCACG
AACACTCTCACTTTCACAGAACCAACACAGCGGCCTTCCTGCCTACCCCC
AGCGGGACCCGCGCTCAAGCAATACCCAGCCGACAATGTCCAGGACGACG
CCGGGATCAGTGTCTGGCGTTTCACCGGGCGACGGTTCACCGAATACCCC
CGATTTGACCTCATCCACTGCAGTGGTTCCGCCAGCACTTCGACCTCGAG
GTTACGTGCCCCCATCAGCGAGGACACAGCAAGGAACACAGCACCCGGCC
TCTACTACTGCTTCTCCAGTGCCAACGTCGTCAAGTTATTATCAGCAGTC
GCAAGCTCAACAACATTCGCATACGGCTGGCCCATTCTCTCATCTGCCAC
CACATCCTGAAGAATTCGACGATGGCGCCTATATTGCTCCGCTAGTTACG
TCGCCCGCCCAGTCATCGTCGGCCAACTTTGTGACAACTGGCACGCCGCC
TTCACGCTCGATGAATGCGGGAAACTCCAGATATGGGCGCCCCCTTCCGC
AACGGCTAGAACTTGCTCGGCGAGCACATTTACTTGGCCATCATTACAAC
CCGCAGGCTGCGCAGGCCATTGTGGAGGCTCATATGCAGCTGCAGCGCCA
ACGCCAGCGTCAGCGCCAGGGGCTCGGTACCCACCCCACGAAGCCATCCG
CAAGTCTTGATAATGCGAAAGACGGCCGCCCCGAACCAAAGGAGGCGCAT
GAAATGCGAGTGTCGCTCGAATGCAAGGTTTGCTTCACCCAACTCGTTGA
TACGGTACTGCTTCCTTGCGGCCATGCTGTCCTCTGTCGGTGGTGCGCCG
AGATTCAGATCCCCAACAGCATTCTGGAACGAGGCTTGCTTGGAGGTCAG
CCCCCGTGTGTGATATGCCGAGCGCCTGTGAAGCAAAAGGTAAAGGCCGA
TGTTGAAGACTTCCCTGGATCATTGACCATCGCTCACACTGACTTGGGGA
CACAGGTGCGGATTTTTCTTTCTTGAATGGACTCTGCGAGTCGCCCTGCT
TTTGAAGGGCTTCCCGCGGCGATTCCCAACAATAACAACTATCAAATCAC
CCCAACTTCCGCTACGTTGGCCCAGTCTAACACCCAAGACGTAATGGACA
CCACGATTTCTGACGTGCCGCGTCCGACATACCAACAAGAAGTCCCTACA
GTCGCGAGTCTGTCTGGGGCTCCAAACGCCTTCTCATCCAATGCTATATC
GAGCCAGACAGATTCTTTCCCTTCACAGCAACCACCACCGAGGTCCAATT
TTTCATACTTGAGCAATGGCATCATCACCATGCCCCGCTACACACCGAAC
CAGTACTATGGGGAACCGAGCAATATCGGTCATCAACTGGATTACATTCC
TGGTGGAGGTCGAGGTCGCTCATTCGTGTACCCTCATGCACGAACACTCT
CACTTTCACAGAACCAACACAGCGGCCTTCCTGCCTACCCCCAGCGGGAC
CCGCGCTCAAGCAATACCCAGCCGACAATGTCCAGGACGACGCCGGGATC
AGTGTCTGGCGTTTCACCGGGCGACGGTTCACCGAATACCCCCGATTTGA
CCTCATCCACTGCAGTGGTTCCGCCAGCACTTCGACCTCGAGGTTACGTG
CCCCCATCAGCGAGGACACAGCAAGGAACACAGCACCCGGCCTCTACTAC
TGCTTCTCCAGTGCCAACGTCGTCAAGTTATTATCAGCAGTCGCAAGCTC
AACAACATTCGCATACGGCTGGCCCATTCTCTCATCTGCCACCACATCCT
GAAGAATTCGACGATGGCGCCTATATTGCTCCGCTAGTTACGTCGCCCGC
CCAGTCATCGTCGGCCAACTTTGTGACAACTGGCACGCCGCCTTCACGCT
CGATGAATGCGGGAAACTCCAGATATGGGCGCCCCCTTCCGCAACGGCTA
GAACTTGCTCGGCGAGCACATTTACTTGGCCATCATTACAACCCGCAGGC
TGCGCAGGCCATTGTGGAGGCTCATATGCAGCTGCAGCGCCAACGCCAGC
GTCAGCGCCAGGGGCTCGGTACCCACCCCACGAAGCCATCCGCAAGTCTT
GATAATGCGAAAGACGGCCGCCCCGAACCAAAGGAGGCGCATGAAATGCG
AGTGTCGCTCGAATGCAAGGTTTGCTTCACCCAACTCGTTGATACGGTAC
TGCTTCCTTGCGGCCATGCTGTCCTCTGTCGGTGGTGCGCCGAGATTCAG
ATCCCCAACAGCATTCTGGAACGAGGCTTGCTTGGAGGTCAGCCCCCGTG
TGTGATATGCCGAGCGCCTGTGAAGCAAAAGGTAAAGGCCGATGTTGAAG
ACTTCCCTGGATCATTGACCATCGCTCACACTGACTTGGGGACACAGGTG
CGGATTTTTCTTTCTTGAATGGACTCTGCGAGTCGCCCTGCTTTTGAAGG
GCTTCCCGCGGCGATTCCCAACAATAACAACTATCAAATCACCCCAACTT
CCGCTACGTTGGCCCAGTCTAACACCCAAGACGTAATGGACACCACGATT
TCTGACGTGCCGCGTCCGACATACCAACAAGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13920 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:973219..974665 - |
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