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KJC3_008112-T1, KJC3_008112-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008112-T1
Unique NameKJC3_008112-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1001643..1002780+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008112-T1 ID=KJC3_008112-T1|Name=KJC3_008112-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1138bp|location=Sequence derived from alignment at ch6:1001643..1002780+ (Aspergillus niger KJC3)
CTTCTGCTGTGCAGTCGCTCCTTTCATTTCCCTTCCCAATTGCAGAGATC
ACCGGTCAAGATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGC
ACCAGCCGTTCTACAACATTGTTGTAGCCCAGGCACGGTAGGTAAATTTT
TTATGGATACCGGGAATCAGTATATCGCGTTCCGCGAGCGACTCATTTGG
AGGTTTTCTAAGGGCAATATGTGATCTAATGCTAATGGAGATATATCCTA
TAGGTCGGCCCGCGACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACC
CTATCCCGCAGCGCCCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCC
AAAGCATACAAGGAGATTTCGCTCGATCGATCTCGAGCCAAGTACTGGAT
TGGTGTTGGTGCGCAGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCG
TACGTTGCCTGCCACTGCACACAAGCATGTCCGCCAGTAGGAAGGGTTAT
GGACCTGGGTAACGACAGTGATTGACTAATATTCGGTATTTACTACAGGC
CGGGATTGTGAAAGAAAGCAAAAATGTGCAAAACTGAGGCGTGGATATCT
GTTGAATTCGACATCTGTATAATTGCACGGTGTACTCACCTTCGAGCTTC
CATTGCTCGGATAGGGTGAGGTGAACACTGTCATTTGGGGGAACGTTGGC
GATGGCTTTTCCGGAGTGGAAAAGTATCTGTTTTTCTTTTTCAATATCAT
GCTACTGGCATTTCTCATGGCGTTTACTGAGAACTATTCTCCTGGAATTG
ATTTATGGGTCGAGCTTTATGTACATTATGTGAGTCGATTACGTGCTGCC
TCTGTGCTTGTGTGATATACAATTTGCATTTTATCGGGCCTCTGTCTCCC
TCTCTCCCTGTATAAGTCGTTCAAAATGCAGCCAGATGCCTCATGTTAGG
TATGGCGACTATGACTGGCAGGGATGAGATTTCCGCGCTGCATGAGCAGG
CATACCTTCCTTGAGCCTGCTAAAATAATGCTAAAGCCACCTCCGGGATC
AGGCAGGGTTTTCATACACAGGCGGGCACAGAAGCAGAGAAAGAGGGCAT
TAGTTCTAAACTATGTTCGTGTTGAAAGTTCCAGATGC
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Coding sequence (CDS) from alignment at ch6:1001643..1002780+

>KJC3_008112-T1 ID=KJC3_008112-T1|Name=KJC3_008112-T1|organism=Aspergillus niger KJC3|type=CDS|length=936bp|location=Sequence derived from alignment at ch6:1001643..1002780+ (Aspergillus niger KJC3)
ATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGCACCAGCCGTT
CTACAACATTGTTGTAGCCCAGGCACGGTCGGCCCGCGACTCAAAACCTC
TTGAAGTCATCGGTACTTTCAACCCTATCCCGCAGCGCCCTACGAACTTG
TCCGAGCAGGAGGCCCGCACCGCCAAAGCATACAAGGAGATTTCGCTCGA
TCGATCTCGAGCCAAGTACTGGATTGGTGTTGGTGCGCAGCCCAGTGATA
GTGTTTGGAAGTTACTAAGCCTCGCCGGGATTGTGAAAGAAAGCAAAAAT
GTGCAAAACTGAATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCG
GCACCAGCCGTTCTACAACATTGTTGTAGCCCAGGCACGGTCGGCCCGCG
ACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCTATCCCGCAGCGC
CCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAAAGCATACAAGGA
GATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTGGTGTTGGTGCGC
AGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCGCCGGGATTGTGAAA
GAAAGCAAAAATGTGCAAAACTGAATGGTTGTTCGCATTCGCCTCTCCCG
CTTTGGAAACCGGCACCAGCCGTTCTACAACATTGTTGTAGCCCAGGCAC
GGTCGGCCCGCGACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCT
ATCCCGCAGCGCCCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAA
AGCATACAAGGAGATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTG
GTGTTGGTGCGCAGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCGCC
GGGATTGTGAAAGAAAGCAAAAATGTGCAAAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CYT21KJC3_008112Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008112-T1KJC3_008112-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008112-T1.utr5p1KJC3_008112-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008112-T1.exon1KJC3_008112-T1.exon1Aspergillus niger KJC3exon
KJC3_008112-T1.exon2KJC3_008112-T1.exon2Aspergillus niger KJC3exon
KJC3_008112-T1.exon3KJC3_008112-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008112-T1.cdsKJC3_008112-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008112-T1.utr3p1KJC3_008112-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092652YI
DBxrefInterPro:IPR023803
DBxrefInterPro:IPR000307
DBxrefPFAM:PF00886
Product mitochondrial
ProductRibosomal protein S16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1001643..1002780 +
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